co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G13460

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010412: mannan metabolic process	0.00E+00
2	GO:0035437: maintenance of protein localization in endoplasmic reticulum	0.00E+00
3	GO:0031338: regulation of vesicle fusion	1.00E-04
4	GO:0009739: response to gibberellin	1.55E-04
5	GO:0044210: 'de novo' CTP biosynthetic process	3.92E-04
6	GO:0090630: activation of GTPase activity	3.92E-04
7	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.69E-04
8	GO:0070417: cellular response to cold	5.51E-04
9	GO:0046345: abscisic acid catabolic process	7.50E-04
10	GO:0015689: molybdate ion transport	7.50E-04
11	GO:0046355: mannan catabolic process	7.50E-04
12	GO:0022622: root system development	7.50E-04
13	GO:0009828: plant-type cell wall loosening	9.40E-04
14	GO:0006665: sphingolipid metabolic process	9.47E-04
15	GO:0009823: cytokinin catabolic process	9.47E-04
16	GO:0006656: phosphatidylcholine biosynthetic process	9.47E-04
17	GO:0045490: pectin catabolic process	1.06E-03
18	GO:0047484: regulation of response to osmotic stress	1.16E-03
19	GO:1900425: negative regulation of defense response to bacterium	1.16E-03
20	GO:0030154: cell differentiation	1.25E-03
21	GO:0045926: negative regulation of growth	1.38E-03
22	GO:2000033: regulation of seed dormancy process	1.38E-03
23	GO:0010103: stomatal complex morphogenesis	1.62E-03
24	GO:0032880: regulation of protein localization	1.62E-03
25	GO:0009631: cold acclimation	1.65E-03
26	GO:0016051: carbohydrate biosynthetic process	1.81E-03
27	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	1.87E-03
28	GO:0009690: cytokinin metabolic process	1.87E-03
29	GO:0008610: lipid biosynthetic process	1.87E-03
30	GO:0035265: organ growth	1.87E-03
31	GO:0009819: drought recovery	1.87E-03
32	GO:0042761: very long-chain fatty acid biosynthetic process	2.70E-03
33	GO:0009664: plant-type cell wall organization	2.90E-03
34	GO:0009641: shade avoidance	3.00E-03
35	GO:0006949: syncytium formation	3.00E-03
36	GO:0045037: protein import into chloroplast stroma	3.63E-03
37	GO:0043086: negative regulation of catalytic activity	3.68E-03
38	GO:2000012: regulation of auxin polar transport	3.95E-03
39	GO:0042545: cell wall modification	4.29E-03
40	GO:0006979: response to oxidative stress	4.78E-03
41	GO:0010025: wax biosynthetic process	5.00E-03
42	GO:0006289: nucleotide-excision repair	5.37E-03
43	GO:2000377: regulation of reactive oxygen species metabolic process	5.37E-03
44	GO:0009863: salicylic acid mediated signaling pathway	5.37E-03
45	GO:0030150: protein import into mitochondrial matrix	5.37E-03
46	GO:0010187: negative regulation of seed germination	5.37E-03
47	GO:0001944: vasculature development	6.94E-03
48	GO:0006284: base-excision repair	7.35E-03
49	GO:0008284: positive regulation of cell proliferation	7.78E-03
50	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	7.78E-03
51	GO:0042631: cellular response to water deprivation	8.21E-03
52	GO:0000226: microtubule cytoskeleton organization	8.21E-03
53	GO:0009958: positive gravitropism	8.65E-03
54	GO:0010268: brassinosteroid homeostasis	8.65E-03
55	GO:0045489: pectin biosynthetic process	8.65E-03
56	GO:0006470: protein dephosphorylation	8.71E-03
57	GO:0010468: regulation of gene expression	9.09E-03
58	GO:0009749: response to glucose	9.56E-03
59	GO:0010183: pollen tube guidance	9.56E-03
60	GO:0000302: response to reactive oxygen species	1.00E-02
61	GO:0016132: brassinosteroid biosynthetic process	1.00E-02
62	GO:1901657: glycosyl compound metabolic process	1.10E-02
63	GO:0009826: unidimensional cell growth	1.14E-02
64	GO:0009639: response to red or far red light	1.15E-02
65	GO:0016125: sterol metabolic process	1.15E-02
66	GO:0019760: glucosinolate metabolic process	1.15E-02
67	GO:0009911: positive regulation of flower development	1.30E-02
68	GO:0009723: response to ethylene	1.37E-02
69	GO:0048527: lateral root development	1.74E-02
70	GO:0007568: aging	1.74E-02
71	GO:0009867: jasmonic acid mediated signaling pathway	1.86E-02
72	GO:0009637: response to blue light	1.86E-02
73	GO:0071555: cell wall organization	1.99E-02
74	GO:0032259: methylation	2.08E-02
75	GO:0006631: fatty acid metabolic process	2.10E-02
76	GO:0008283: cell proliferation	2.22E-02
77	GO:0010114: response to red light	2.22E-02
78	GO:0009744: response to sucrose	2.22E-02
79	GO:0042546: cell wall biogenesis	2.29E-02
80	GO:0009753: response to jasmonic acid	2.33E-02
81	GO:0009644: response to high light intensity	2.35E-02
82	GO:0042538: hyperosmotic salinity response	2.61E-02
83	GO:0015031: protein transport	2.68E-02
84	GO:0009873: ethylene-activated signaling pathway	2.80E-02
85	GO:0009409: response to cold	2.90E-02
86	GO:0048367: shoot system development	3.17E-02
87	GO:0009740: gibberellic acid mediated signaling pathway	3.38E-02
88	GO:0009624: response to nematode	3.53E-02
89	GO:0009742: brassinosteroid mediated signaling pathway	3.68E-02
90	GO:0009058: biosynthetic process	4.30E-02
91	GO:0006355: regulation of transcription, DNA-templated	4.56E-02
92	GO:0007275: multicellular organism development	4.59E-02
93	GO:0009790: embryo development	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0003883: CTP synthase activity	4.78E-06
2	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	1.00E-04
3	GO:0004105: choline-phosphate cytidylyltransferase activity	1.00E-04
4	GO:0008083: growth factor activity	2.31E-04
5	GO:0017040: ceramidase activity	2.36E-04
6	GO:0047216: inositol 3-alpha-galactosyltransferase activity	2.36E-04
7	GO:0048531: beta-1,3-galactosyltransferase activity	2.36E-04
8	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	3.92E-04
9	GO:0016985: mannan endo-1,4-beta-mannosidase activity	7.50E-04
10	GO:0019104: DNA N-glycosylase activity	7.50E-04
11	GO:0015098: molybdate ion transmembrane transporter activity	7.50E-04
12	GO:0019139: cytokinin dehydrogenase activity	9.47E-04
13	GO:0017137: Rab GTPase binding	9.47E-04
14	GO:0046910: pectinesterase inhibitor activity	9.73E-04
15	GO:0004620: phospholipase activity	1.62E-03
16	GO:0043565: sequence-specific DNA binding	1.85E-03
17	GO:0015288: porin activity	1.87E-03
18	GO:0016209: antioxidant activity	1.87E-03
19	GO:0000989: transcription factor activity, transcription factor binding	2.41E-03
20	GO:0015020: glucuronosyltransferase activity	3.00E-03
21	GO:0045330: aspartyl esterase activity	3.44E-03
22	GO:0015266: protein channel activity	3.95E-03
23	GO:0030599: pectinesterase activity	4.16E-03
24	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.30E-03
25	GO:0008146: sulfotransferase activity	4.64E-03
26	GO:0044212: transcription regulatory region DNA binding	4.73E-03
27	GO:0004857: enzyme inhibitor activity	5.37E-03
28	GO:0004707: MAP kinase activity	6.14E-03
29	GO:0030570: pectate lyase activity	6.94E-03
30	GO:0001085: RNA polymerase II transcription factor binding	8.65E-03
31	GO:0003684: damaged DNA binding	1.15E-02
32	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.16E-02
33	GO:0008375: acetylglucosaminyltransferase activity	1.40E-02
34	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.43E-02
35	GO:0102483: scopolin beta-glucosidase activity	1.46E-02
36	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.51E-02
37	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.57E-02
38	GO:0005096: GTPase activator activity	1.62E-02
39	GO:0004222: metalloendopeptidase activity	1.68E-02
40	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.74E-02
41	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.74E-02
42	GO:0003993: acid phosphatase activity	1.91E-02
43	GO:0004722: protein serine/threonine phosphatase activity	1.93E-02
44	GO:0008422: beta-glucosidase activity	1.97E-02
45	GO:0015171: amino acid transmembrane transporter activity	2.95E-02
46	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.17E-02
47	GO:0016874: ligase activity	3.38E-02
48	GO:0016758: transferase activity, transferring hexosyl groups	4.06E-02
49	GO:0016829: lyase activity	4.38E-02
50	GO:0004252: serine-type endopeptidase activity	4.46E-02
51	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.54E-02
52	GO:0015144: carbohydrate transmembrane transporter activity	4.70E-02
53	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0031357: integral component of chloroplast inner membrane	5.31E-07
3	GO:0009527: plastid outer membrane	7.50E-04
4	GO:0005618: cell wall	1.06E-03
5	GO:0031305: integral component of mitochondrial inner membrane	1.87E-03
6	GO:0046930: pore complex	2.14E-03
7	GO:0031225: anchored component of membrane	3.18E-03
8	GO:0031012: extracellular matrix	3.95E-03
9	GO:0005744: mitochondrial inner membrane presequence translocase complex	7.35E-03
10	GO:0005615: extracellular space	8.52E-03
11	GO:0005576: extracellular region	8.74E-03
12	GO:0046658: anchored component of plasma membrane	1.01E-02
13	GO:0005788: endoplasmic reticulum lumen	1.35E-02
14	GO:0005667: transcription factor complex	1.40E-02
15	GO:0009707: chloroplast outer membrane	1.57E-02
16	GO:0005622: intracellular	1.68E-02
17	GO:0009505: plant-type cell wall	2.64E-02
18	GO:0000139: Golgi membrane	2.90E-02
19	GO:0012505: endomembrane system	3.46E-02
20	GO:0005654: nucleoplasm	4.06E-02
21	GO:0005623: cell	4.22E-02