GO Enrichment Analysis of Co-expressed Genes with
AT5G12980
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046085: adenosine metabolic process | 0.00E+00 |
| 2 | GO:0009236: cobalamin biosynthetic process | 0.00E+00 |
| 3 | GO:0048870: cell motility | 0.00E+00 |
| 4 | GO:0015822: ornithine transport | 0.00E+00 |
| 5 | GO:0036172: thiamine salvage | 0.00E+00 |
| 6 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 3.70E-09 |
| 7 | GO:0009853: photorespiration | 3.84E-08 |
| 8 | GO:0000066: mitochondrial ornithine transport | 1.71E-04 |
| 9 | GO:2001006: regulation of cellulose biosynthetic process | 1.71E-04 |
| 10 | GO:0019354: siroheme biosynthetic process | 1.71E-04 |
| 11 | GO:0097502: mannosylation | 1.71E-04 |
| 12 | GO:0016031: tRNA import into mitochondrion | 1.71E-04 |
| 13 | GO:0009240: isopentenyl diphosphate biosynthetic process | 1.71E-04 |
| 14 | GO:0031468: nuclear envelope reassembly | 1.71E-04 |
| 15 | GO:0007163: establishment or maintenance of cell polarity | 3.87E-04 |
| 16 | GO:0006432: phenylalanyl-tRNA aminoacylation | 3.87E-04 |
| 17 | GO:0071668: plant-type cell wall assembly | 3.87E-04 |
| 18 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 3.87E-04 |
| 19 | GO:2000071: regulation of defense response by callose deposition | 3.87E-04 |
| 20 | GO:0006099: tricarboxylic acid cycle | 4.54E-04 |
| 21 | GO:0015940: pantothenate biosynthetic process | 6.32E-04 |
| 22 | GO:0006760: folic acid-containing compound metabolic process | 6.32E-04 |
| 23 | GO:0015992: proton transport | 7.97E-04 |
| 24 | GO:0009647: skotomorphogenesis | 9.04E-04 |
| 25 | GO:1901332: negative regulation of lateral root development | 9.04E-04 |
| 26 | GO:0006107: oxaloacetate metabolic process | 9.04E-04 |
| 27 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 9.04E-04 |
| 28 | GO:0009399: nitrogen fixation | 9.04E-04 |
| 29 | GO:0009963: positive regulation of flavonoid biosynthetic process | 9.04E-04 |
| 30 | GO:0015991: ATP hydrolysis coupled proton transport | 1.19E-03 |
| 31 | GO:0044205: 'de novo' UMP biosynthetic process | 1.20E-03 |
| 32 | GO:0034613: cellular protein localization | 1.20E-03 |
| 33 | GO:0006542: glutamine biosynthetic process | 1.20E-03 |
| 34 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.20E-03 |
| 35 | GO:0009649: entrainment of circadian clock | 1.20E-03 |
| 36 | GO:0032366: intracellular sterol transport | 1.20E-03 |
| 37 | GO:0030041: actin filament polymerization | 1.52E-03 |
| 38 | GO:0046283: anthocyanin-containing compound metabolic process | 1.52E-03 |
| 39 | GO:0009229: thiamine diphosphate biosynthetic process | 1.52E-03 |
| 40 | GO:0010090: trichome morphogenesis | 1.78E-03 |
| 41 | GO:0033365: protein localization to organelle | 1.87E-03 |
| 42 | GO:0007035: vacuolar acidification | 1.87E-03 |
| 43 | GO:0009228: thiamine biosynthetic process | 1.87E-03 |
| 44 | GO:0000054: ribosomal subunit export from nucleus | 2.24E-03 |
| 45 | GO:0022904: respiratory electron transport chain | 2.64E-03 |
| 46 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 2.64E-03 |
| 47 | GO:0000028: ribosomal small subunit assembly | 3.06E-03 |
| 48 | GO:0045010: actin nucleation | 3.06E-03 |
| 49 | GO:0009231: riboflavin biosynthetic process | 3.06E-03 |
| 50 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 3.06E-03 |
| 51 | GO:0006506: GPI anchor biosynthetic process | 3.06E-03 |
| 52 | GO:0009808: lignin metabolic process | 3.50E-03 |
| 53 | GO:0006754: ATP biosynthetic process | 3.95E-03 |
| 54 | GO:0048589: developmental growth | 3.95E-03 |
| 55 | GO:0000902: cell morphogenesis | 3.95E-03 |
| 56 | GO:1900865: chloroplast RNA modification | 4.44E-03 |
| 57 | GO:0009641: shade avoidance | 4.93E-03 |
| 58 | GO:0009682: induced systemic resistance | 5.45E-03 |
| 59 | GO:0052544: defense response by callose deposition in cell wall | 5.45E-03 |
| 60 | GO:0016925: protein sumoylation | 5.98E-03 |
| 61 | GO:0015031: protein transport | 5.99E-03 |
| 62 | GO:0006486: protein glycosylation | 6.43E-03 |
| 63 | GO:0006108: malate metabolic process | 6.54E-03 |
| 64 | GO:0006006: glucose metabolic process | 6.54E-03 |
| 65 | GO:0006807: nitrogen compound metabolic process | 6.54E-03 |
| 66 | GO:0009691: cytokinin biosynthetic process | 6.54E-03 |
| 67 | GO:0010224: response to UV-B | 6.66E-03 |
| 68 | GO:0019853: L-ascorbic acid biosynthetic process | 7.69E-03 |
| 69 | GO:0010039: response to iron ion | 7.69E-03 |
| 70 | GO:0007030: Golgi organization | 7.69E-03 |
| 71 | GO:0016569: covalent chromatin modification | 8.63E-03 |
| 72 | GO:0006487: protein N-linked glycosylation | 8.92E-03 |
| 73 | GO:0008299: isoprenoid biosynthetic process | 9.56E-03 |
| 74 | GO:0010431: seed maturation | 1.02E-02 |
| 75 | GO:0061077: chaperone-mediated protein folding | 1.02E-02 |
| 76 | GO:0016226: iron-sulfur cluster assembly | 1.09E-02 |
| 77 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.09E-02 |
| 78 | GO:0007005: mitochondrion organization | 1.09E-02 |
| 79 | GO:0000413: protein peptidyl-prolyl isomerization | 1.37E-02 |
| 80 | GO:0010118: stomatal movement | 1.37E-02 |
| 81 | GO:0006606: protein import into nucleus | 1.37E-02 |
| 82 | GO:0006662: glycerol ether metabolic process | 1.45E-02 |
| 83 | GO:0006979: response to oxidative stress | 1.46E-02 |
| 84 | GO:0015986: ATP synthesis coupled proton transport | 1.52E-02 |
| 85 | GO:0061025: membrane fusion | 1.52E-02 |
| 86 | GO:0002229: defense response to oomycetes | 1.68E-02 |
| 87 | GO:0006914: autophagy | 1.93E-02 |
| 88 | GO:0010286: heat acclimation | 2.01E-02 |
| 89 | GO:0055114: oxidation-reduction process | 2.34E-02 |
| 90 | GO:0042128: nitrate assimilation | 2.36E-02 |
| 91 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.45E-02 |
| 92 | GO:0048573: photoperiodism, flowering | 2.45E-02 |
| 93 | GO:0015995: chlorophyll biosynthetic process | 2.45E-02 |
| 94 | GO:0042254: ribosome biogenesis | 2.51E-02 |
| 95 | GO:0010311: lateral root formation | 2.73E-02 |
| 96 | GO:0048527: lateral root development | 2.93E-02 |
| 97 | GO:0010119: regulation of stomatal movement | 2.93E-02 |
| 98 | GO:0009867: jasmonic acid mediated signaling pathway | 3.12E-02 |
| 99 | GO:0016192: vesicle-mediated transport | 3.21E-02 |
| 100 | GO:0034599: cellular response to oxidative stress | 3.22E-02 |
| 101 | GO:0006839: mitochondrial transport | 3.43E-02 |
| 102 | GO:0045454: cell redox homeostasis | 3.65E-02 |
| 103 | GO:0009640: photomorphogenesis | 3.74E-02 |
| 104 | GO:0006886: intracellular protein transport | 3.77E-02 |
| 105 | GO:0000154: rRNA modification | 4.06E-02 |
| 106 | GO:0009965: leaf morphogenesis | 4.06E-02 |
| 107 | GO:0031347: regulation of defense response | 4.29E-02 |
| 108 | GO:0016042: lipid catabolic process | 4.37E-02 |
| 109 | GO:0009408: response to heat | 4.49E-02 |
| 110 | GO:0006281: DNA repair | 4.49E-02 |
| 111 | GO:0009585: red, far-red light phototransduction | 4.62E-02 |
| 112 | GO:0042742: defense response to bacterium | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity | 0.00E+00 |
| 2 | GO:0016852: sirohydrochlorin cobaltochelatase activity | 0.00E+00 |
| 3 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 4 | GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity | 0.00E+00 |
| 5 | GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity | 0.00E+00 |
| 6 | GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity | 0.00E+00 |
| 7 | GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 8 | GO:0000033: alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 9 | GO:0050152: omega-amidase activity | 0.00E+00 |
| 10 | GO:0051266: sirohydrochlorin ferrochelatase activity | 0.00E+00 |
| 11 | GO:0004746: riboflavin synthase activity | 0.00E+00 |
| 12 | GO:0004151: dihydroorotase activity | 0.00E+00 |
| 13 | GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity | 0.00E+00 |
| 14 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 5.28E-06 |
| 15 | GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity | 1.71E-04 |
| 16 | GO:0080047: GDP-L-galactose phosphorylase activity | 1.71E-04 |
| 17 | GO:0004452: isopentenyl-diphosphate delta-isomerase activity | 1.71E-04 |
| 18 | GO:0080048: GDP-D-glucose phosphorylase activity | 1.71E-04 |
| 19 | GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | 1.71E-04 |
| 20 | GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity | 1.71E-04 |
| 21 | GO:0000064: L-ornithine transmembrane transporter activity | 3.87E-04 |
| 22 | GO:0004826: phenylalanine-tRNA ligase activity | 3.87E-04 |
| 23 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 3.87E-04 |
| 24 | GO:0032403: protein complex binding | 6.32E-04 |
| 25 | GO:0008649: rRNA methyltransferase activity | 6.32E-04 |
| 26 | GO:0008265: Mo-molybdopterin cofactor sulfurase activity | 6.32E-04 |
| 27 | GO:0005047: signal recognition particle binding | 6.32E-04 |
| 28 | GO:0051536: iron-sulfur cluster binding | 6.60E-04 |
| 29 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.20E-03 |
| 30 | GO:0004576: oligosaccharyl transferase activity | 1.20E-03 |
| 31 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.20E-03 |
| 32 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 1.20E-03 |
| 33 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.28E-03 |
| 34 | GO:0016651: oxidoreductase activity, acting on NAD(P)H | 1.52E-03 |
| 35 | GO:0005496: steroid binding | 1.52E-03 |
| 36 | GO:0031386: protein tag | 1.52E-03 |
| 37 | GO:0004356: glutamate-ammonia ligase activity | 1.52E-03 |
| 38 | GO:0030151: molybdenum ion binding | 1.52E-03 |
| 39 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.52E-03 |
| 40 | GO:0051117: ATPase binding | 1.87E-03 |
| 41 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 1.87E-03 |
| 42 | GO:0070300: phosphatidic acid binding | 2.24E-03 |
| 43 | GO:0008143: poly(A) binding | 2.64E-03 |
| 44 | GO:0008320: protein transmembrane transporter activity | 2.64E-03 |
| 45 | GO:0005085: guanyl-nucleotide exchange factor activity | 2.64E-03 |
| 46 | GO:0035064: methylated histone binding | 3.06E-03 |
| 47 | GO:0015078: hydrogen ion transmembrane transporter activity | 3.50E-03 |
| 48 | GO:0042802: identical protein binding | 3.60E-03 |
| 49 | GO:0003735: structural constituent of ribosome | 4.03E-03 |
| 50 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.23E-03 |
| 51 | GO:0001055: RNA polymerase II activity | 4.44E-03 |
| 52 | GO:0043621: protein self-association | 5.17E-03 |
| 53 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 5.45E-03 |
| 54 | GO:0001054: RNA polymerase I activity | 5.45E-03 |
| 55 | GO:0004129: cytochrome-c oxidase activity | 5.45E-03 |
| 56 | GO:0008794: arsenate reductase (glutaredoxin) activity | 5.45E-03 |
| 57 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.57E-03 |
| 58 | GO:0001056: RNA polymerase III activity | 5.98E-03 |
| 59 | GO:0000049: tRNA binding | 5.98E-03 |
| 60 | GO:0004089: carbonate dehydratase activity | 6.54E-03 |
| 61 | GO:0015266: protein channel activity | 6.54E-03 |
| 62 | GO:0043130: ubiquitin binding | 8.92E-03 |
| 63 | GO:0005528: FK506 binding | 8.92E-03 |
| 64 | GO:0015035: protein disulfide oxidoreductase activity | 9.44E-03 |
| 65 | GO:0004386: helicase activity | 1.00E-02 |
| 66 | GO:0047134: protein-disulfide reductase activity | 1.30E-02 |
| 67 | GO:0004527: exonuclease activity | 1.45E-02 |
| 68 | GO:0008080: N-acetyltransferase activity | 1.45E-02 |
| 69 | GO:0004791: thioredoxin-disulfide reductase activity | 1.52E-02 |
| 70 | GO:0003824: catalytic activity | 1.66E-02 |
| 71 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.84E-02 |
| 72 | GO:0016597: amino acid binding | 2.10E-02 |
| 73 | GO:0008375: acetylglucosaminyltransferase activity | 2.36E-02 |
| 74 | GO:0016788: hydrolase activity, acting on ester bonds | 2.51E-02 |
| 75 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.64E-02 |
| 76 | GO:0050897: cobalt ion binding | 2.93E-02 |
| 77 | GO:0003746: translation elongation factor activity | 3.12E-02 |
| 78 | GO:0052689: carboxylic ester hydrolase activity | 3.37E-02 |
| 79 | GO:0005525: GTP binding | 3.83E-02 |
| 80 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.96E-02 |
| 81 | GO:0005198: structural molecule activity | 4.06E-02 |
| 82 | GO:0016787: hydrolase activity | 4.42E-02 |
| 83 | GO:0003924: GTPase activity | 4.49E-02 |
| 84 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016469: proton-transporting two-sector ATPase complex | 0.00E+00 |
| 2 | GO:0005747: mitochondrial respiratory chain complex I | 8.84E-17 |
| 3 | GO:0045271: respiratory chain complex I | 1.28E-10 |
| 4 | GO:0031966: mitochondrial membrane | 1.81E-07 |
| 5 | GO:0045273: respiratory chain complex II | 1.95E-06 |
| 6 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 1.95E-06 |
| 7 | GO:0005739: mitochondrion | 1.42E-05 |
| 8 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 2.26E-05 |
| 9 | GO:0000152: nuclear ubiquitin ligase complex | 1.71E-04 |
| 10 | GO:0005783: endoplasmic reticulum | 3.25E-04 |
| 11 | GO:0005750: mitochondrial respiratory chain complex III | 4.79E-04 |
| 12 | GO:0005853: eukaryotic translation elongation factor 1 complex | 6.32E-04 |
| 13 | GO:0005758: mitochondrial intermembrane space | 6.60E-04 |
| 14 | GO:0005840: ribosome | 1.14E-03 |
| 15 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 1.20E-03 |
| 16 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 1.20E-03 |
| 17 | GO:0033179: proton-transporting V-type ATPase, V0 domain | 1.20E-03 |
| 18 | GO:0005773: vacuole | 1.28E-03 |
| 19 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 1.52E-03 |
| 20 | GO:0008250: oligosaccharyltransferase complex | 1.52E-03 |
| 21 | GO:0009536: plastid | 1.55E-03 |
| 22 | GO:0031209: SCAR complex | 1.87E-03 |
| 23 | GO:0032588: trans-Golgi network membrane | 1.87E-03 |
| 24 | GO:0005829: cytosol | 2.54E-03 |
| 25 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 2.64E-03 |
| 26 | GO:0000421: autophagosome membrane | 3.06E-03 |
| 27 | GO:0009507: chloroplast | 3.93E-03 |
| 28 | GO:0005763: mitochondrial small ribosomal subunit | 3.95E-03 |
| 29 | GO:0005736: DNA-directed RNA polymerase I complex | 3.95E-03 |
| 30 | GO:0005666: DNA-directed RNA polymerase III complex | 4.44E-03 |
| 31 | GO:0016604: nuclear body | 4.44E-03 |
| 32 | GO:0005665: DNA-directed RNA polymerase II, core complex | 5.98E-03 |
| 33 | GO:0016607: nuclear speck | 7.86E-03 |
| 34 | GO:0005789: endoplasmic reticulum membrane | 8.25E-03 |
| 35 | GO:0000419: DNA-directed RNA polymerase V complex | 8.30E-03 |
| 36 | GO:0031410: cytoplasmic vesicle | 1.09E-02 |
| 37 | GO:0005774: vacuolar membrane | 1.19E-02 |
| 38 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.23E-02 |
| 39 | GO:0071944: cell periphery | 1.84E-02 |
| 40 | GO:0032580: Golgi cisterna membrane | 1.93E-02 |
| 41 | GO:0022626: cytosolic ribosome | 1.95E-02 |
| 42 | GO:0005788: endoplasmic reticulum lumen | 2.27E-02 |
| 43 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.70E-02 |
| 44 | GO:0000325: plant-type vacuole | 2.93E-02 |
| 45 | GO:0005730: nucleolus | 3.15E-02 |
| 46 | GO:0022625: cytosolic large ribosomal subunit | 3.21E-02 |
| 47 | GO:0005856: cytoskeleton | 4.06E-02 |