co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G11790

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010412: mannan metabolic process	0.00E+00
2	GO:0031338: regulation of vesicle fusion	1.08E-04
3	GO:0060627: regulation of vesicle-mediated transport	1.08E-04
4	GO:0016051: carbohydrate biosynthetic process	1.85E-04
5	GO:0015786: UDP-glucose transport	2.52E-04
6	GO:0044210: 'de novo' CTP biosynthetic process	4.19E-04
7	GO:0090630: activation of GTPase activity	4.19E-04
8	GO:0015783: GDP-fucose transport	4.19E-04
9	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	5.16E-04
10	GO:0072334: UDP-galactose transmembrane transport	6.01E-04
11	GO:0045489: pectin biosynthetic process	7.01E-04
12	GO:0046345: abscisic acid catabolic process	7.98E-04
13	GO:0015689: molybdate ion transport	7.98E-04
14	GO:0046355: mannan catabolic process	7.98E-04
15	GO:0022622: root system development	7.98E-04
16	GO:0006665: sphingolipid metabolic process	1.01E-03
17	GO:0032957: inositol trisphosphate metabolic process	1.01E-03
18	GO:0048359: mucilage metabolic process involved in seed coat development	1.01E-03
19	GO:0009823: cytokinin catabolic process	1.01E-03
20	GO:0006656: phosphatidylcholine biosynthetic process	1.01E-03
21	GO:0009828: plant-type cell wall loosening	1.03E-03
22	GO:0045490: pectin catabolic process	1.19E-03
23	GO:0047484: regulation of response to osmotic stress	1.23E-03
24	GO:0071555: cell wall organization	1.28E-03
25	GO:0010103: stomatal complex morphogenesis	1.73E-03
26	GO:0032880: regulation of protein localization	1.73E-03
27	GO:0009690: cytokinin metabolic process	2.00E-03
28	GO:0035265: organ growth	2.00E-03
29	GO:0015780: nucleotide-sugar transport	2.57E-03
30	GO:0042761: very long-chain fatty acid biosynthetic process	2.88E-03
31	GO:0009664: plant-type cell wall organization	3.20E-03
32	GO:0009641: shade avoidance	3.20E-03
33	GO:0006949: syncytium formation	3.20E-03
34	GO:0042538: hyperosmotic salinity response	3.20E-03
35	GO:0043086: negative regulation of catalytic activity	4.05E-03
36	GO:2000012: regulation of auxin polar transport	4.23E-03
37	GO:0042545: cell wall modification	4.72E-03
38	GO:0009624: response to nematode	4.86E-03
39	GO:0010025: wax biosynthetic process	5.35E-03
40	GO:0009833: plant-type primary cell wall biogenesis	5.35E-03
41	GO:0006825: copper ion transport	6.15E-03
42	GO:0030154: cell differentiation	6.24E-03
43	GO:0070417: cellular response to cold	8.32E-03
44	GO:0008284: positive regulation of cell proliferation	8.32E-03
45	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.32E-03
46	GO:0042631: cellular response to water deprivation	8.79E-03
47	GO:0009958: positive gravitropism	9.26E-03
48	GO:0010268: brassinosteroid homeostasis	9.26E-03
49	GO:0009739: response to gibberellin	9.39E-03
50	GO:0010468: regulation of gene expression	1.00E-02
51	GO:0016132: brassinosteroid biosynthetic process	1.07E-02
52	GO:0080156: mitochondrial mRNA modification	1.07E-02
53	GO:1901657: glycosyl compound metabolic process	1.18E-02
54	GO:0009639: response to red or far red light	1.23E-02
55	GO:0016125: sterol metabolic process	1.23E-02
56	GO:0009826: unidimensional cell growth	1.25E-02
57	GO:0048527: lateral root development	1.86E-02
58	GO:0007568: aging	1.86E-02
59	GO:0009631: cold acclimation	1.86E-02
60	GO:0006886: intracellular protein transport	2.00E-02
61	GO:0016310: phosphorylation	2.12E-02
62	GO:0009414: response to water deprivation	2.18E-02
63	GO:0006897: endocytosis	2.25E-02
64	GO:0006631: fatty acid metabolic process	2.25E-02
65	GO:0006979: response to oxidative stress	2.27E-02
66	GO:0008283: cell proliferation	2.38E-02
67	GO:0010114: response to red light	2.38E-02
68	GO:0042546: cell wall biogenesis	2.45E-02
69	GO:0008643: carbohydrate transport	2.52E-02
70	GO:0009873: ethylene-activated signaling pathway	3.08E-02
71	GO:0009742: brassinosteroid mediated signaling pathway	3.94E-02
72	GO:0009058: biosynthetic process	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0003883: CTP synthase activity	5.42E-06
2	GO:0004105: choline-phosphate cytidylyltransferase activity	1.08E-04
3	GO:0017040: ceramidase activity	2.52E-04
4	GO:0047216: inositol 3-alpha-galactosyltransferase activity	2.52E-04
5	GO:0048531: beta-1,3-galactosyltransferase activity	2.52E-04
6	GO:0008083: growth factor activity	2.55E-04
7	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	4.19E-04
8	GO:0005457: GDP-fucose transmembrane transporter activity	4.19E-04
9	GO:0047325: inositol tetrakisphosphate 1-kinase activity	4.19E-04
10	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	4.19E-04
11	GO:0005460: UDP-glucose transmembrane transporter activity	6.01E-04
12	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	6.01E-04
13	GO:0016985: mannan endo-1,4-beta-mannosidase activity	7.98E-04
14	GO:0015098: molybdate ion transmembrane transporter activity	7.98E-04
15	GO:0005459: UDP-galactose transmembrane transporter activity	1.01E-03
16	GO:0019139: cytokinin dehydrogenase activity	1.01E-03
17	GO:0017137: Rab GTPase binding	1.01E-03
18	GO:0046910: pectinesterase inhibitor activity	1.10E-03
19	GO:0016209: antioxidant activity	2.00E-03
20	GO:0015020: glucuronosyltransferase activity	3.20E-03
21	GO:0005543: phospholipid binding	3.53E-03
22	GO:0045330: aspartyl esterase activity	3.79E-03
23	GO:0030599: pectinesterase activity	4.58E-03
24	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.59E-03
25	GO:0044212: transcription regulatory region DNA binding	5.49E-03
26	GO:0004857: enzyme inhibitor activity	5.75E-03
27	GO:0016758: transferase activity, transferring hexosyl groups	5.92E-03
28	GO:0004707: MAP kinase activity	6.56E-03
29	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	6.99E-03
30	GO:0030570: pectate lyase activity	7.42E-03
31	GO:0008514: organic anion transmembrane transporter activity	7.87E-03
32	GO:0001085: RNA polymerase II transcription factor binding	9.26E-03
33	GO:0016757: transferase activity, transferring glycosyl groups	1.09E-02
34	GO:0016759: cellulose synthase activity	1.23E-02
35	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.28E-02
36	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.31E-02
37	GO:0008375: acetylglucosaminyltransferase activity	1.51E-02
38	GO:0102483: scopolin beta-glucosidase activity	1.56E-02
39	GO:0005096: GTPase activator activity	1.74E-02
40	GO:0004222: metalloendopeptidase activity	1.80E-02
41	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.86E-02
42	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.86E-02
43	GO:0003993: acid phosphatase activity	2.05E-02
44	GO:0008422: beta-glucosidase activity	2.12E-02
45	GO:0003924: GTPase activity	2.39E-02
46	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.39E-02
47	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.55E-02
48	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.55E-02
49	GO:0016874: ligase activity	3.63E-02
50	GO:0022857: transmembrane transporter activity	3.63E-02
51	GO:0016829: lyase activity	4.69E-02
52	GO:0004252: serine-type endopeptidase activity	4.78E-02
53	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0031357: integral component of chloroplast inner membrane	2.52E-04
2	GO:0005794: Golgi apparatus	2.71E-04
3	GO:0000139: Golgi membrane	5.29E-04
4	GO:0031012: extracellular matrix	4.23E-03
5	GO:0005618: cell wall	4.41E-03
6	GO:0005576: extracellular region	6.45E-03
7	GO:0005905: clathrin-coated pit	6.56E-03
8	GO:0030136: clathrin-coated vesicle	8.32E-03
9	GO:0005615: extracellular space	9.39E-03
10	GO:0005667: transcription factor complex	1.51E-02
11	GO:0031225: anchored component of membrane	1.62E-02
12	GO:0005802: trans-Golgi network	1.67E-02
13	GO:0005622: intracellular	1.91E-02
14	GO:0005768: endosome	1.97E-02
15	GO:0009505: plant-type cell wall	2.98E-02
16	GO:0012505: endomembrane system	3.70E-02
17	GO:0005654: nucleoplasm	4.35E-02