GO Enrichment Analysis of Co-expressed Genes with
AT5G10690
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 2 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 5 | GO:0010027: thylakoid membrane organization | 8.30E-07 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 6.19E-06 |
| 7 | GO:0042371: vitamin K biosynthetic process | 1.21E-05 |
| 8 | GO:0043609: regulation of carbon utilization | 1.21E-05 |
| 9 | GO:0016117: carotenoid biosynthetic process | 3.02E-05 |
| 10 | GO:0035304: regulation of protein dephosphorylation | 3.21E-05 |
| 11 | GO:0018026: peptidyl-lysine monomethylation | 3.21E-05 |
| 12 | GO:0097054: L-glutamate biosynthetic process | 3.21E-05 |
| 13 | GO:0006000: fructose metabolic process | 5.78E-05 |
| 14 | GO:0015979: photosynthesis | 8.12E-05 |
| 15 | GO:0006537: glutamate biosynthetic process | 8.79E-05 |
| 16 | GO:0006020: inositol metabolic process | 8.79E-05 |
| 17 | GO:0006021: inositol biosynthetic process | 1.22E-04 |
| 18 | GO:0019676: ammonia assimilation cycle | 1.22E-04 |
| 19 | GO:0015994: chlorophyll metabolic process | 1.22E-04 |
| 20 | GO:0006564: L-serine biosynthetic process | 1.59E-04 |
| 21 | GO:0010236: plastoquinone biosynthetic process | 1.59E-04 |
| 22 | GO:0016123: xanthophyll biosynthetic process | 1.59E-04 |
| 23 | GO:0006465: signal peptide processing | 1.59E-04 |
| 24 | GO:0042793: transcription from plastid promoter | 1.98E-04 |
| 25 | GO:0042549: photosystem II stabilization | 1.98E-04 |
| 26 | GO:0046855: inositol phosphate dephosphorylation | 1.98E-04 |
| 27 | GO:0042372: phylloquinone biosynthetic process | 2.39E-04 |
| 28 | GO:0009416: response to light stimulus | 2.62E-04 |
| 29 | GO:0009772: photosynthetic electron transport in photosystem II | 2.82E-04 |
| 30 | GO:0009642: response to light intensity | 3.27E-04 |
| 31 | GO:0006002: fructose 6-phosphate metabolic process | 3.73E-04 |
| 32 | GO:0071482: cellular response to light stimulus | 3.73E-04 |
| 33 | GO:0010205: photoinhibition | 4.69E-04 |
| 34 | GO:0019684: photosynthesis, light reaction | 5.71E-04 |
| 35 | GO:0009073: aromatic amino acid family biosynthetic process | 5.71E-04 |
| 36 | GO:0006790: sulfur compound metabolic process | 6.23E-04 |
| 37 | GO:0010207: photosystem II assembly | 7.31E-04 |
| 38 | GO:0046854: phosphatidylinositol phosphorylation | 7.88E-04 |
| 39 | GO:0009658: chloroplast organization | 8.37E-04 |
| 40 | GO:0006814: sodium ion transport | 1.47E-03 |
| 41 | GO:0006281: DNA repair | 1.48E-03 |
| 42 | GO:0071554: cell wall organization or biogenesis | 1.61E-03 |
| 43 | GO:0018298: protein-chromophore linkage | 2.46E-03 |
| 44 | GO:0006499: N-terminal protein myristoylation | 2.63E-03 |
| 45 | GO:0009853: photorespiration | 2.89E-03 |
| 46 | GO:0009744: response to sucrose | 3.43E-03 |
| 47 | GO:0006364: rRNA processing | 4.20E-03 |
| 48 | GO:0009790: embryo development | 6.94E-03 |
| 49 | GO:0006810: transport | 7.65E-03 |
| 50 | GO:0009793: embryo development ending in seed dormancy | 1.21E-02 |
| 51 | GO:0055114: oxidation-reduction process | 1.30E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 2 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 4 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 5 | GO:0016041: glutamate synthase (ferredoxin) activity | 1.21E-05 |
| 6 | GO:0010242: oxygen evolving activity | 1.21E-05 |
| 7 | GO:0010291: carotene beta-ring hydroxylase activity | 3.21E-05 |
| 8 | GO:0047746: chlorophyllase activity | 3.21E-05 |
| 9 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.21E-05 |
| 10 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.21E-05 |
| 11 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.21E-05 |
| 12 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.21E-05 |
| 13 | GO:0003913: DNA photolyase activity | 5.78E-05 |
| 14 | GO:0008508: bile acid:sodium symporter activity | 8.79E-05 |
| 15 | GO:0004659: prenyltransferase activity | 1.22E-04 |
| 16 | GO:0016279: protein-lysine N-methyltransferase activity | 1.22E-04 |
| 17 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.59E-04 |
| 18 | GO:2001070: starch binding | 1.98E-04 |
| 19 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.39E-04 |
| 20 | GO:0009881: photoreceptor activity | 2.82E-04 |
| 21 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.15E-04 |
| 22 | GO:0008266: poly(U) RNA binding | 7.31E-04 |
| 23 | GO:0000287: magnesium ion binding | 8.23E-04 |
| 24 | GO:0003887: DNA-directed DNA polymerase activity | 8.44E-04 |
| 25 | GO:0003684: damaged DNA binding | 1.83E-03 |
| 26 | GO:0016413: O-acetyltransferase activity | 1.98E-03 |
| 27 | GO:0016597: amino acid binding | 1.98E-03 |
| 28 | GO:0004721: phosphoprotein phosphatase activity | 2.30E-03 |
| 29 | GO:0019825: oxygen binding | 3.68E-03 |
| 30 | GO:0051287: NAD binding | 3.90E-03 |
| 31 | GO:0005509: calcium ion binding | 4.81E-03 |
| 32 | GO:0005506: iron ion binding | 5.13E-03 |
| 33 | GO:0004252: serine-type endopeptidase activity | 6.70E-03 |
| 34 | GO:0020037: heme binding | 8.22E-03 |
| 35 | GO:0042802: identical protein binding | 9.21E-03 |
| 36 | GO:0016787: hydrolase activity | 1.12E-02 |
| 37 | GO:0004497: monooxygenase activity | 1.23E-02 |
| 38 | GO:0003924: GTPase activity | 1.62E-02 |
| 39 | GO:0005525: GTP binding | 3.48E-02 |
| 40 | GO:0005215: transporter activity | 4.34E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 7.70E-16 |
| 2 | GO:0009534: chloroplast thylakoid | 3.32E-10 |
| 3 | GO:0009570: chloroplast stroma | 3.43E-09 |
| 4 | GO:0009941: chloroplast envelope | 9.15E-06 |
| 5 | GO:0030095: chloroplast photosystem II | 1.03E-05 |
| 6 | GO:0009654: photosystem II oxygen evolving complex | 1.76E-05 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 2.07E-05 |
| 8 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.21E-05 |
| 9 | GO:0019898: extrinsic component of membrane | 4.31E-05 |
| 10 | GO:0031969: chloroplast membrane | 6.66E-05 |
| 11 | GO:0031977: thylakoid lumen | 1.51E-04 |
| 12 | GO:0009579: thylakoid | 3.31E-04 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 4.04E-04 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.21E-04 |
| 15 | GO:0009508: plastid chromosome | 6.76E-04 |
| 16 | GO:0009522: photosystem I | 1.47E-03 |
| 17 | GO:0009295: nucleoid | 1.91E-03 |
| 18 | GO:0009706: chloroplast inner membrane | 5.34E-03 |
| 19 | GO:0010287: plastoglobule | 6.01E-03 |
| 20 | GO:0005759: mitochondrial matrix | 7.30E-03 |
| 21 | GO:0016021: integral component of membrane | 2.90E-02 |