co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G10180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905177: tracheary element differentiation	0.00E+00
2	GO:0071474: cellular hyperosmotic response	0.00E+00
3	GO:0000023: maltose metabolic process	0.00E+00
4	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
5	GO:0030155: regulation of cell adhesion	0.00E+00
6	GO:0019323: pentose catabolic process	0.00E+00
7	GO:0090627: plant epidermal cell differentiation	0.00E+00
8	GO:0090279: regulation of calcium ion import	0.00E+00
9	GO:0015717: triose phosphate transport	0.00E+00
10	GO:0015979: photosynthesis	2.74E-13
11	GO:0009735: response to cytokinin	1.16E-07
12	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.11E-06
13	GO:0006000: fructose metabolic process	4.13E-06
14	GO:0009773: photosynthetic electron transport in photosystem I	6.94E-06
15	GO:0005983: starch catabolic process	8.86E-06
16	GO:0006094: gluconeogenesis	1.11E-05
17	GO:0010021: amylopectin biosynthetic process	1.80E-05
18	GO:0009409: response to cold	6.85E-05
19	GO:0009645: response to low light intensity stimulus	8.22E-05
20	GO:0019252: starch biosynthetic process	8.98E-05
21	GO:0005978: glycogen biosynthetic process	1.06E-04
22	GO:0006002: fructose 6-phosphate metabolic process	1.33E-04
23	GO:0080093: regulation of photorespiration	1.50E-04
24	GO:0031998: regulation of fatty acid beta-oxidation	1.50E-04
25	GO:0005991: trehalose metabolic process	1.50E-04
26	GO:0000025: maltose catabolic process	1.50E-04
27	GO:0005980: glycogen catabolic process	1.50E-04
28	GO:0044262: cellular carbohydrate metabolic process	1.50E-04
29	GO:0005982: starch metabolic process	1.96E-04
30	GO:0051262: protein tetramerization	3.42E-04
31	GO:0009629: response to gravity	3.42E-04
32	GO:0005976: polysaccharide metabolic process	3.42E-04
33	GO:0007154: cell communication	3.42E-04
34	GO:0005986: sucrose biosynthetic process	3.54E-04
35	GO:0009266: response to temperature stimulus	4.00E-04
36	GO:0010025: wax biosynthetic process	4.99E-04
37	GO:0009644: response to high light intensity	5.19E-04
38	GO:0006289: nucleotide-excision repair	5.53E-04
39	GO:0035436: triose phosphate transmembrane transport	5.61E-04
40	GO:0090153: regulation of sphingolipid biosynthetic process	5.61E-04
41	GO:0048281: inflorescence morphogenesis	5.61E-04
42	GO:0006518: peptide metabolic process	5.61E-04
43	GO:0010623: programmed cell death involved in cell development	5.61E-04
44	GO:0009768: photosynthesis, light harvesting in photosystem I	6.09E-04
45	GO:0010017: red or far-red light signaling pathway	7.29E-04
46	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.03E-04
47	GO:0043481: anthocyanin accumulation in tissues in response to UV light	8.03E-04
48	GO:0010148: transpiration	8.03E-04
49	GO:0009052: pentose-phosphate shunt, non-oxidative branch	8.03E-04
50	GO:0010731: protein glutathionylation	8.03E-04
51	GO:0006284: base-excision repair	8.59E-04
52	GO:0042335: cuticle development	9.99E-04
53	GO:0010037: response to carbon dioxide	1.06E-03
54	GO:0015976: carbon utilization	1.06E-03
55	GO:0010023: proanthocyanidin biosynthetic process	1.06E-03
56	GO:0051322: anaphase	1.06E-03
57	GO:0019464: glycine decarboxylation via glycine cleavage system	1.06E-03
58	GO:0009765: photosynthesis, light harvesting	1.06E-03
59	GO:0010600: regulation of auxin biosynthetic process	1.06E-03
60	GO:0010508: positive regulation of autophagy	1.06E-03
61	GO:2000122: negative regulation of stomatal complex development	1.06E-03
62	GO:0015713: phosphoglycerate transport	1.06E-03
63	GO:0006097: glyoxylate cycle	1.35E-03
64	GO:0006461: protein complex assembly	1.35E-03
65	GO:0006544: glycine metabolic process	1.35E-03
66	GO:0009643: photosynthetic acclimation	1.65E-03
67	GO:0006563: L-serine metabolic process	1.65E-03
68	GO:0000470: maturation of LSU-rRNA	1.65E-03
69	GO:0009913: epidermal cell differentiation	1.65E-03
70	GO:0009955: adaxial/abaxial pattern specification	1.98E-03
71	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.98E-03
72	GO:1901259: chloroplast rRNA processing	1.98E-03
73	GO:0007623: circadian rhythm	2.10E-03
74	GO:0015995: chlorophyll biosynthetic process	2.21E-03
75	GO:0010103: stomatal complex morphogenesis	2.33E-03
76	GO:0010161: red light signaling pathway	2.33E-03
77	GO:0070370: cellular heat acclimation	2.33E-03
78	GO:0018298: protein-chromophore linkage	2.45E-03
79	GO:0009817: defense response to fungus, incompatible interaction	2.45E-03
80	GO:0009231: riboflavin biosynthetic process	2.70E-03
81	GO:0010928: regulation of auxin mediated signaling pathway	2.70E-03
82	GO:0030091: protein repair	2.70E-03
83	GO:0070413: trehalose metabolism in response to stress	2.70E-03
84	GO:0009704: de-etiolation	2.70E-03
85	GO:0006979: response to oxidative stress	2.88E-03
86	GO:0032544: plastid translation	3.08E-03
87	GO:0009827: plant-type cell wall modification	3.08E-03
88	GO:0009657: plastid organization	3.08E-03
89	GO:0001558: regulation of cell growth	3.08E-03
90	GO:0006783: heme biosynthetic process	3.49E-03
91	GO:0035999: tetrahydrofolate interconversion	3.91E-03
92	GO:0042761: very long-chain fatty acid biosynthetic process	3.91E-03
93	GO:0048829: root cap development	4.35E-03
94	GO:0006782: protoporphyrinogen IX biosynthetic process	4.35E-03
95	GO:0009750: response to fructose	4.80E-03
96	GO:0048765: root hair cell differentiation	4.80E-03
97	GO:0045037: protein import into chloroplast stroma	5.27E-03
98	GO:0010582: floral meristem determinacy	5.27E-03
99	GO:0006108: malate metabolic process	5.75E-03
100	GO:0009718: anthocyanin-containing compound biosynthetic process	5.75E-03
101	GO:0010102: lateral root morphogenesis	5.75E-03
102	GO:0010628: positive regulation of gene expression	5.75E-03
103	GO:0005975: carbohydrate metabolic process	5.89E-03
104	GO:0046686: response to cadmium ion	6.17E-03
105	GO:0019253: reductive pentose-phosphate cycle	6.25E-03
106	GO:0005985: sucrose metabolic process	6.77E-03
107	GO:0009624: response to nematode	7.61E-03
108	GO:0005992: trehalose biosynthetic process	7.84E-03
109	GO:0009944: polarity specification of adaxial/abaxial axis	7.84E-03
110	GO:0006281: DNA repair	7.86E-03
111	GO:0051302: regulation of cell division	8.40E-03
112	GO:0007017: microtubule-based process	8.40E-03
113	GO:0030245: cellulose catabolic process	9.56E-03
114	GO:0035428: hexose transmembrane transport	9.56E-03
115	GO:0001944: vasculature development	1.02E-02
116	GO:0009686: gibberellin biosynthetic process	1.02E-02
117	GO:0010089: xylem development	1.08E-02
118	GO:0042742: defense response to bacterium	1.09E-02
119	GO:0010182: sugar mediated signaling pathway	1.27E-02
120	GO:0048868: pollen tube development	1.27E-02
121	GO:0046323: glucose import	1.27E-02
122	GO:0015986: ATP synthesis coupled proton transport	1.34E-02
123	GO:0048825: cotyledon development	1.41E-02
124	GO:0000302: response to reactive oxygen species	1.47E-02
125	GO:1901657: glycosyl compound metabolic process	1.62E-02
126	GO:0006310: DNA recombination	1.69E-02
127	GO:0000910: cytokinesis	1.84E-02
128	GO:0009911: positive regulation of flower development	1.92E-02
129	GO:0006970: response to osmotic stress	2.20E-02
130	GO:0016311: dephosphorylation	2.23E-02
131	GO:0000160: phosphorelay signal transduction system	2.40E-02
132	GO:0009832: plant-type cell wall biogenesis	2.40E-02
133	GO:0010218: response to far red light	2.48E-02
134	GO:0009834: plant-type secondary cell wall biogenesis	2.48E-02
135	GO:0010119: regulation of stomatal movement	2.56E-02
136	GO:0009637: response to blue light	2.74E-02
137	GO:0009853: photorespiration	2.74E-02
138	GO:0006099: tricarboxylic acid cycle	2.83E-02
139	GO:0034599: cellular response to oxidative stress	2.83E-02
140	GO:0045454: cell redox homeostasis	3.04E-02
141	GO:0010114: response to red light	3.28E-02
142	GO:0009640: photomorphogenesis	3.28E-02
143	GO:0009737: response to abscisic acid	3.35E-02
144	GO:0009965: leaf morphogenesis	3.56E-02
145	GO:0016042: lipid catabolic process	3.64E-02
146	GO:0006855: drug transmembrane transport	3.66E-02
147	GO:0000165: MAPK cascade	3.76E-02
148	GO:0009664: plant-type cell wall organization	3.85E-02
149	GO:0009585: red, far-red light phototransduction	4.05E-02
150	GO:0006096: glycolytic process	4.56E-02
151	GO:0009626: plant-type hypersensitive response	4.78E-02
152	GO:0009740: gibberellic acid mediated signaling pathway	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0009899: ent-kaurene synthase activity	0.00E+00
2	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
3	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
4	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
5	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
6	GO:0005363: maltose transmembrane transporter activity	0.00E+00
7	GO:0004567: beta-mannosidase activity	0.00E+00
8	GO:0080082: esculin beta-glucosidase activity	0.00E+00
9	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.11E-06
10	GO:2001070: starch binding	4.37E-05
11	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	1.50E-04
12	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.50E-04
13	GO:0005227: calcium activated cation channel activity	1.50E-04
14	GO:0080079: cellobiose glucosidase activity	1.50E-04
15	GO:0008184: glycogen phosphorylase activity	1.50E-04
16	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.50E-04
17	GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity	1.50E-04
18	GO:0004853: uroporphyrinogen decarboxylase activity	1.50E-04
19	GO:0004134: 4-alpha-glucanotransferase activity	1.50E-04
20	GO:0004645: phosphorylase activity	1.50E-04
21	GO:0008158: hedgehog receptor activity	1.50E-04
22	GO:0010297: heteropolysaccharide binding	3.42E-04
23	GO:0033201: alpha-1,4-glucan synthase activity	3.42E-04
24	GO:0004750: ribulose-phosphate 3-epimerase activity	3.42E-04
25	GO:0003844: 1,4-alpha-glucan branching enzyme activity	3.42E-04
26	GO:0008967: phosphoglycolate phosphatase activity	3.42E-04
27	GO:0008266: poly(U) RNA binding	4.00E-04
28	GO:0031409: pigment binding	4.99E-04
29	GO:0045174: glutathione dehydrogenase (ascorbate) activity	5.61E-04
30	GO:0071917: triose-phosphate transmembrane transporter activity	5.61E-04
31	GO:0004324: ferredoxin-NADP+ reductase activity	5.61E-04
32	GO:0043169: cation binding	5.61E-04
33	GO:0004373: glycogen (starch) synthase activity	5.61E-04
34	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	8.03E-04
35	GO:0016851: magnesium chelatase activity	8.03E-04
36	GO:0042277: peptide binding	1.06E-03
37	GO:0015120: phosphoglycerate transmembrane transporter activity	1.06E-03
38	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.06E-03
39	GO:0019104: DNA N-glycosylase activity	1.06E-03
40	GO:0019199: transmembrane receptor protein kinase activity	1.06E-03
41	GO:0009011: starch synthase activity	1.06E-03
42	GO:0008878: glucose-1-phosphate adenylyltransferase activity	1.06E-03
43	GO:0048038: quinone binding	1.31E-03
44	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.34E-03
45	GO:0008725: DNA-3-methyladenine glycosylase activity	1.35E-03
46	GO:0004372: glycine hydroxymethyltransferase activity	1.35E-03
47	GO:0003959: NADPH dehydrogenase activity	1.35E-03
48	GO:0019843: rRNA binding	1.40E-03
49	GO:0016615: malate dehydrogenase activity	1.65E-03
50	GO:0004332: fructose-bisphosphate aldolase activity	1.65E-03
51	GO:0004130: cytochrome-c peroxidase activity	1.65E-03
52	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.98E-03
53	GO:0030060: L-malate dehydrogenase activity	1.98E-03
54	GO:0005261: cation channel activity	1.98E-03
55	GO:0004602: glutathione peroxidase activity	1.98E-03
56	GO:0016168: chlorophyll binding	1.99E-03
57	GO:0015078: hydrogen ion transmembrane transporter activity	3.08E-03
58	GO:0047372: acylglycerol lipase activity	4.80E-03
59	GO:0004089: carbonate dehydratase activity	5.75E-03
60	GO:0004022: alcohol dehydrogenase (NAD) activity	5.75E-03
61	GO:0015035: protein disulfide oxidoreductase activity	7.84E-03
62	GO:0005528: FK506 binding	7.84E-03
63	GO:0008810: cellulase activity	1.02E-02
64	GO:0030170: pyridoxal phosphate binding	1.06E-02
65	GO:0005355: glucose transmembrane transporter activity	1.34E-02
66	GO:0000156: phosphorelay response regulator activity	1.62E-02
67	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.68E-02
68	GO:0003684: damaged DNA binding	1.69E-02
69	GO:0016791: phosphatase activity	1.69E-02
70	GO:0005200: structural constituent of cytoskeleton	1.76E-02
71	GO:0016788: hydrolase activity, acting on ester bonds	2.09E-02
72	GO:0102483: scopolin beta-glucosidase activity	2.15E-02
73	GO:0004222: metalloendopeptidase activity	2.48E-02
74	GO:0052689: carboxylic ester hydrolase activity	2.81E-02
75	GO:0008422: beta-glucosidase activity	2.91E-02
76	GO:0004871: signal transducer activity	3.18E-02
77	GO:0004364: glutathione transferase activity	3.19E-02
78	GO:0016787: hydrolase activity	3.38E-02
79	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.66E-02
80	GO:0003924: GTPase activity	3.74E-02
81	GO:0009055: electron carrier activity	4.01E-02
82	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0042579: microbody	0.00E+00
2	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
3	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
4	GO:0009507: chloroplast	1.04E-26
5	GO:0009534: chloroplast thylakoid	7.52E-25
6	GO:0009941: chloroplast envelope	3.32E-20
7	GO:0009535: chloroplast thylakoid membrane	4.34E-20
8	GO:0009570: chloroplast stroma	2.23E-17
9	GO:0009579: thylakoid	5.24E-16
10	GO:0010287: plastoglobule	6.64E-07
11	GO:0009538: photosystem I reaction center	1.41E-06
12	GO:0010319: stromule	6.19E-06
13	GO:0009501: amyloplast	1.06E-04
14	GO:0009782: photosystem I antenna complex	1.50E-04
15	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.63E-04
16	GO:0009543: chloroplast thylakoid lumen	1.88E-04
17	GO:0043036: starch grain	3.42E-04
18	GO:0030093: chloroplast photosystem I	3.42E-04
19	GO:0009508: plastid chromosome	3.54E-04
20	GO:0030095: chloroplast photosystem II	4.00E-04
21	GO:0030076: light-harvesting complex	4.48E-04
22	GO:0010007: magnesium chelatase complex	5.61E-04
23	GO:0009706: chloroplast inner membrane	1.06E-03
24	GO:0009522: photosystem I	1.15E-03
25	GO:0009523: photosystem II	1.23E-03
26	GO:0030915: Smc5-Smc6 complex	1.35E-03
27	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	1.65E-03
28	GO:0009295: nucleoid	1.68E-03
29	GO:0009533: chloroplast stromal thylakoid	2.33E-03
30	GO:0048046: apoplast	2.98E-03
31	GO:0005763: mitochondrial small ribosomal subunit	3.49E-03
32	GO:0042644: chloroplast nucleoid	3.49E-03
33	GO:0045298: tubulin complex	3.49E-03
34	GO:0031977: thylakoid lumen	3.67E-03
35	GO:0016020: membrane	3.79E-03
36	GO:0009574: preprophase band	5.75E-03
37	GO:0009654: photosystem II oxygen evolving complex	8.40E-03
38	GO:0042651: thylakoid membrane	8.40E-03
39	GO:0015935: small ribosomal subunit	8.97E-03
40	GO:0005840: ribosome	1.17E-02
41	GO:0019898: extrinsic component of membrane	1.41E-02
42	GO:0009536: plastid	1.48E-02
43	GO:0005874: microtubule	2.45E-02
44	GO:0031969: chloroplast membrane	2.54E-02
45	GO:0005834: heterotrimeric G-protein complex	4.78E-02