co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G09490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044843: cell cycle G1/S phase transition	0.00E+00
2	GO:0034050: host programmed cell death induced by symbiont	0.00E+00
3	GO:1904874: positive regulation of telomerase RNA localization to Cajal body	0.00E+00
4	GO:0006412: translation	3.30E-62
5	GO:0042254: ribosome biogenesis	1.44E-28
6	GO:0000027: ribosomal large subunit assembly	8.58E-06
7	GO:0000028: ribosomal small subunit assembly	5.25E-05
8	GO:0006407: rRNA export from nucleus	9.50E-05
9	GO:0031120: snRNA pseudouridine synthesis	9.50E-05
10	GO:0031118: rRNA pseudouridine synthesis	9.50E-05
11	GO:0030490: maturation of SSU-rRNA	9.50E-05
12	GO:0000494: box C/D snoRNA 3'-end processing	9.50E-05
13	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	9.50E-05
14	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	9.50E-05
15	GO:1990258: histone glutamine methylation	9.50E-05
16	GO:0010162: seed dormancy process	1.20E-04
17	GO:0006626: protein targeting to mitochondrion	1.88E-04
18	GO:0045905: positive regulation of translational termination	2.24E-04
19	GO:0045901: positive regulation of translational elongation	2.24E-04
20	GO:0048569: post-embryonic animal organ development	2.24E-04
21	GO:0006452: translational frameshifting	2.24E-04
22	GO:0009735: response to cytokinin	2.24E-04
23	GO:0009944: polarity specification of adaxial/abaxial axis	3.00E-04
24	GO:0006364: rRNA processing	3.09E-04
25	GO:0042256: mature ribosome assembly	3.73E-04
26	GO:0009294: DNA mediated transformation	4.36E-04
27	GO:0007004: telomere maintenance via telomerase	5.37E-04
28	GO:0031167: rRNA methylation	9.02E-04
29	GO:0000470: maturation of LSU-rRNA	1.10E-03
30	GO:0009955: adaxial/abaxial pattern specification	1.31E-03
31	GO:0001522: pseudouridine synthesis	1.78E-03
32	GO:0001558: regulation of cell growth	2.03E-03
33	GO:0001510: RNA methylation	2.03E-03
34	GO:0012501: programmed cell death	3.44E-03
35	GO:0051302: regulation of cell division	5.46E-03
36	GO:0015031: protein transport	6.06E-03
37	GO:0007005: mitochondrion organization	6.20E-03
38	GO:0009409: response to cold	6.66E-03
39	GO:0008033: tRNA processing	7.79E-03
40	GO:0000413: protein peptidyl-prolyl isomerization	7.79E-03
41	GO:0010197: polar nucleus fusion	8.21E-03
42	GO:0009644: response to high light intensity	2.23E-02
43	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.41E-02
44	GO:0016569: covalent chromatin modification	3.20E-02
45	GO:0000398: mRNA splicing, via spliceosome	3.70E-02
46	GO:0006457: protein folding	4.59E-02
47	GO:0006413: translational initiation	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0016018: cyclosporin A binding	0.00E+00
2	GO:0034513: box H/ACA snoRNA binding	0.00E+00
3	GO:0003735: structural constituent of ribosome	2.40E-70
4	GO:0003729: mRNA binding	3.09E-11
5	GO:0019843: rRNA binding	7.43E-11
6	GO:0003723: RNA binding	3.70E-06
7	GO:0030515: snoRNA binding	4.01E-05
8	GO:1990259: histone-glutamine methyltransferase activity	9.50E-05
9	GO:0070034: telomerase RNA binding	2.24E-04
10	GO:0004407: histone deacetylase activity	3.00E-04
11	GO:0008649: rRNA methyltransferase activity	3.73E-04
12	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.33E-03
13	GO:0008235: metalloexopeptidase activity	1.54E-03
14	GO:0003746: translation elongation factor activity	1.68E-03
15	GO:0043022: ribosome binding	1.78E-03
16	GO:0044183: protein binding involved in protein folding	3.14E-03
17	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.35E-02
18	GO:0008234: cysteine-type peptidase activity	2.80E-02
19	GO:0051082: unfolded protein binding	3.34E-02
20	GO:0046872: metal ion binding	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0090661: box H/ACA telomerase RNP complex	0.00E+00
2	GO:0072589: box H/ACA scaRNP complex	0.00E+00
3	GO:0022626: cytosolic ribosome	3.28E-50
4	GO:0022625: cytosolic large ribosomal subunit	4.90E-50
5	GO:0005840: ribosome	1.84E-44
6	GO:0022627: cytosolic small ribosomal subunit	2.53E-31
7	GO:0005730: nucleolus	3.31E-20
8	GO:0005829: cytosol	6.04E-14
9	GO:0015934: large ribosomal subunit	3.88E-13
10	GO:0005737: cytoplasm	2.16E-12
11	GO:0009506: plasmodesma	5.11E-12
12	GO:0015935: small ribosomal subunit	1.73E-07
13	GO:0015030: Cajal body	1.34E-06
14	GO:0005774: vacuolar membrane	4.52E-06
15	GO:0005773: vacuole	2.57E-05
16	GO:0030686: 90S preribosome	9.50E-05
17	GO:0005758: mitochondrial intermembrane space	3.00E-04
18	GO:0005853: eukaryotic translation elongation factor 1 complex	3.73E-04
19	GO:0031429: box H/ACA snoRNP complex	5.37E-04
20	GO:0016020: membrane	8.57E-04
21	GO:0005618: cell wall	8.98E-04
22	GO:0030529: intracellular ribonucleoprotein complex	1.04E-03
23	GO:0031428: box C/D snoRNP complex	1.10E-03
24	GO:0016272: prefoldin complex	1.31E-03
25	GO:0005742: mitochondrial outer membrane translocase complex	2.03E-03
26	GO:0009507: chloroplast	3.31E-03
27	GO:0032040: small-subunit processome	3.44E-03
28	GO:0005747: mitochondrial respiratory chain complex I	3.52E-03
29	GO:0005622: intracellular	1.53E-02
30	GO:0005743: mitochondrial inner membrane	1.87E-02
31	GO:0005654: nucleoplasm	3.85E-02