co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G09320

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009249: protein lipoylation	0.00E+00
2	GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	0.00E+00
3	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
4	GO:0009583: detection of light stimulus	0.00E+00
5	GO:0009106: lipoate metabolic process	0.00E+00
6	GO:0071000: response to magnetism	0.00E+00
7	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
8	GO:0006907: pinocytosis	0.00E+00
9	GO:0016123: xanthophyll biosynthetic process	6.48E-07
10	GO:0010275: NAD(P)H dehydrogenase complex assembly	3.07E-06
11	GO:0009658: chloroplast organization	6.25E-06
12	GO:0016120: carotene biosynthetic process	7.21E-05
13	GO:0045038: protein import into chloroplast thylakoid membrane	7.21E-05
14	GO:0048438: floral whorl development	2.57E-04
15	GO:1902458: positive regulation of stomatal opening	2.57E-04
16	GO:0034970: histone H3-R2 methylation	2.57E-04
17	GO:0034972: histone H3-R26 methylation	2.57E-04
18	GO:0046900: tetrahydrofolylpolyglutamate metabolic process	2.57E-04
19	GO:0071806: protein transmembrane transport	2.57E-04
20	GO:0034971: histone H3-R17 methylation	2.57E-04
21	GO:0072387: flavin adenine dinucleotide metabolic process	2.57E-04
22	GO:0042371: vitamin K biosynthetic process	2.57E-04
23	GO:0071454: cellular response to anoxia	2.57E-04
24	GO:0043686: co-translational protein modification	2.57E-04
25	GO:1900426: positive regulation of defense response to bacterium	4.27E-04
26	GO:0009098: leucine biosynthetic process	4.27E-04
27	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	5.68E-04
28	GO:1903426: regulation of reactive oxygen species biosynthetic process	5.68E-04
29	GO:0080153: negative regulation of reductive pentose-phosphate cycle	5.68E-04
30	GO:0080185: effector dependent induction by symbiont of host immune response	5.68E-04
31	GO:0010343: singlet oxygen-mediated programmed cell death	5.68E-04
32	GO:1901529: positive regulation of anion channel activity	5.68E-04
33	GO:0080005: photosystem stoichiometry adjustment	5.68E-04
34	GO:0010617: circadian regulation of calcium ion oscillation	5.68E-04
35	GO:0050688: regulation of defense response to virus	5.68E-04
36	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	5.68E-04
37	GO:0099402: plant organ development	5.68E-04
38	GO:0009767: photosynthetic electron transport chain	7.47E-04
39	GO:0019253: reductive pentose-phosphate cycle	8.40E-04
40	GO:0010207: photosystem II assembly	8.40E-04
41	GO:1902448: positive regulation of shade avoidance	9.22E-04
42	GO:1901672: positive regulation of systemic acquired resistance	9.22E-04
43	GO:0009451: RNA modification	1.08E-03
44	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.32E-03
45	GO:0090307: mitotic spindle assembly	1.32E-03
46	GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center	1.32E-03
47	GO:0033014: tetrapyrrole biosynthetic process	1.32E-03
48	GO:1901332: negative regulation of lateral root development	1.32E-03
49	GO:0009644: response to high light intensity	1.35E-03
50	GO:0042274: ribosomal small subunit biogenesis	1.76E-03
51	GO:0031935: regulation of chromatin silencing	1.76E-03
52	GO:0009765: photosynthesis, light harvesting	1.76E-03
53	GO:0031122: cytoplasmic microtubule organization	1.76E-03
54	GO:1902347: response to strigolactone	1.76E-03
55	GO:0008033: tRNA processing	2.10E-03
56	GO:0035434: copper ion transmembrane transport	2.25E-03
57	GO:0009107: lipoate biosynthetic process	2.25E-03
58	GO:0009616: virus induced gene silencing	2.25E-03
59	GO:0010117: photoprotection	2.25E-03
60	GO:0046283: anthocyanin-containing compound metabolic process	2.25E-03
61	GO:0031365: N-terminal protein amino acid modification	2.25E-03
62	GO:1901371: regulation of leaf morphogenesis	2.77E-03
63	GO:0060918: auxin transport	2.77E-03
64	GO:0009643: photosynthetic acclimation	2.77E-03
65	GO:0010310: regulation of hydrogen peroxide metabolic process	3.33E-03
66	GO:0015977: carbon fixation	3.33E-03
67	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.33E-03
68	GO:0010076: maintenance of floral meristem identity	3.33E-03
69	GO:0017148: negative regulation of translation	3.33E-03
70	GO:0010019: chloroplast-nucleus signaling pathway	3.33E-03
71	GO:0006401: RNA catabolic process	3.93E-03
72	GO:0009772: photosynthetic electron transport in photosystem II	3.93E-03
73	GO:1900056: negative regulation of leaf senescence	3.93E-03
74	GO:0010050: vegetative phase change	3.93E-03
75	GO:0080111: DNA demethylation	3.93E-03
76	GO:0051510: regulation of unidimensional cell growth	3.93E-03
77	GO:0010044: response to aluminum ion	3.93E-03
78	GO:0016126: sterol biosynthetic process	4.03E-03
79	GO:0048564: photosystem I assembly	4.56E-03
80	GO:0042255: ribosome assembly	4.56E-03
81	GO:0006353: DNA-templated transcription, termination	4.56E-03
82	GO:0006402: mRNA catabolic process	4.56E-03
83	GO:0006605: protein targeting	4.56E-03
84	GO:0009704: de-etiolation	4.56E-03
85	GO:2000070: regulation of response to water deprivation	4.56E-03
86	GO:0015995: chlorophyll biosynthetic process	4.74E-03
87	GO:0022900: electron transport chain	5.22E-03
88	GO:0032544: plastid translation	5.22E-03
89	GO:0018298: protein-chromophore linkage	5.25E-03
90	GO:0010218: response to far red light	5.79E-03
91	GO:0006783: heme biosynthetic process	5.92E-03
92	GO:0000373: Group II intron splicing	5.92E-03
93	GO:0009910: negative regulation of flower development	6.07E-03
94	GO:0009638: phototropism	6.64E-03
95	GO:0006779: porphyrin-containing compound biosynthetic process	6.64E-03
96	GO:0010380: regulation of chlorophyll biosynthetic process	6.64E-03
97	GO:0031425: chloroplast RNA processing	6.64E-03
98	GO:0010267: production of ta-siRNAs involved in RNA interference	6.64E-03
99	GO:0009637: response to blue light	6.65E-03
100	GO:0045036: protein targeting to chloroplast	7.40E-03
101	GO:0009773: photosynthetic electron transport in photosystem I	8.19E-03
102	GO:0043085: positive regulation of catalytic activity	8.19E-03
103	GO:0009744: response to sucrose	8.59E-03
104	GO:0010114: response to red light	8.59E-03
105	GO:0045037: protein import into chloroplast stroma	9.00E-03
106	GO:0010582: floral meristem determinacy	9.00E-03
107	GO:0010075: regulation of meristem growth	9.85E-03
108	GO:0009725: response to hormone	9.85E-03
109	GO:0009785: blue light signaling pathway	9.85E-03
110	GO:0009266: response to temperature stimulus	1.07E-02
111	GO:0034605: cellular response to heat	1.07E-02
112	GO:0006541: glutamine metabolic process	1.07E-02
113	GO:0006364: rRNA processing	1.16E-02
114	GO:0090351: seedling development	1.16E-02
115	GO:0010025: wax biosynthetic process	1.25E-02
116	GO:0006863: purine nucleobase transport	1.25E-02
117	GO:0080167: response to karrikin	1.28E-02
118	GO:0006289: nucleotide-excision repair	1.35E-02
119	GO:2000377: regulation of reactive oxygen species metabolic process	1.35E-02
120	GO:0006825: copper ion transport	1.45E-02
121	GO:0007017: microtubule-based process	1.45E-02
122	GO:0016226: iron-sulfur cluster assembly	1.65E-02
123	GO:0080092: regulation of pollen tube growth	1.65E-02
124	GO:0009793: embryo development ending in seed dormancy	1.71E-02
125	GO:0055114: oxidation-reduction process	1.75E-02
126	GO:0009306: protein secretion	1.86E-02
127	GO:0016117: carotenoid biosynthetic process	1.97E-02
128	GO:0070417: cellular response to cold	1.97E-02
129	GO:0010118: stomatal movement	2.09E-02
130	GO:0009958: positive gravitropism	2.20E-02
131	GO:0048868: pollen tube development	2.20E-02
132	GO:0042752: regulation of circadian rhythm	2.32E-02
133	GO:0009646: response to absence of light	2.32E-02
134	GO:0015986: ATP synthesis coupled proton transport	2.32E-02
135	GO:0009791: post-embryonic development	2.43E-02
136	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.56E-02
137	GO:0010193: response to ozone	2.56E-02
138	GO:0032502: developmental process	2.68E-02
139	GO:0019761: glucosinolate biosynthetic process	2.68E-02
140	GO:0007623: circadian rhythm	2.87E-02
141	GO:0010228: vegetative to reproductive phase transition of meristem	3.00E-02
142	GO:0051607: defense response to virus	3.19E-02
143	GO:0000910: cytokinesis	3.19E-02
144	GO:0009816: defense response to bacterium, incompatible interaction	3.46E-02
145	GO:0009416: response to light stimulus	4.28E-02
146	GO:0009853: photorespiration	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0033819: lipoyl(octanoyl) transferase activity	0.00E+00
2	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
3	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
4	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
5	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
6	GO:1990534: thermospermine oxidase activity	0.00E+00
7	GO:0003862: 3-isopropylmalate dehydrogenase activity	3.07E-06
8	GO:0004848: ureidoglycolate hydrolase activity	1.11E-05
9	GO:0004654: polyribonucleotide nucleotidyltransferase activity	2.57E-04
10	GO:0046906: tetrapyrrole binding	2.57E-04
11	GO:0004325: ferrochelatase activity	2.57E-04
12	GO:0042586: peptide deformylase activity	2.57E-04
13	GO:0008242: omega peptidase activity	2.57E-04
14	GO:0015075: ion transmembrane transporter activity	2.57E-04
15	GO:0030941: chloroplast targeting sequence binding	2.57E-04
16	GO:0048038: quinone binding	2.91E-04
17	GO:0009977: proton motive force dependent protein transmembrane transporter activity	5.68E-04
18	GO:0016415: octanoyltransferase activity	5.68E-04
19	GO:0035241: protein-arginine omega-N monomethyltransferase activity	5.68E-04
20	GO:0034722: gamma-glutamyl-peptidase activity	5.68E-04
21	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	5.68E-04
22	GO:0017118: lipoyltransferase activity	5.68E-04
23	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	5.68E-04
24	GO:0008469: histone-arginine N-methyltransferase activity	9.22E-04
25	GO:0004180: carboxypeptidase activity	9.22E-04
26	GO:0032947: protein complex scaffold	9.22E-04
27	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.22E-04
28	GO:0000900: translation repressor activity, nucleic acid binding	9.22E-04
29	GO:0016984: ribulose-bisphosphate carboxylase activity	1.32E-03
30	GO:0000254: C-4 methylsterol oxidase activity	1.32E-03
31	GO:0016851: magnesium chelatase activity	1.32E-03
32	GO:0009882: blue light photoreceptor activity	1.32E-03
33	GO:0043023: ribosomal large subunit binding	1.32E-03
34	GO:0051537: 2 iron, 2 sulfur cluster binding	1.35E-03
35	GO:0051861: glycolipid binding	1.76E-03
36	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.76E-03
37	GO:0043015: gamma-tubulin binding	1.76E-03
38	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.76E-03
39	GO:0016491: oxidoreductase activity	1.79E-03
40	GO:0051011: microtubule minus-end binding	2.25E-03
41	GO:0003723: RNA binding	2.74E-03
42	GO:0015631: tubulin binding	3.33E-03
43	GO:0019843: rRNA binding	3.71E-03
44	GO:0019899: enzyme binding	3.93E-03
45	GO:0005375: copper ion transmembrane transporter activity	5.22E-03
46	GO:0009055: electron carrier activity	5.64E-03
47	GO:0004519: endonuclease activity	5.76E-03
48	GO:0071949: FAD binding	5.92E-03
49	GO:0005089: Rho guanyl-nucleotide exchange factor activity	8.19E-03
50	GO:0031072: heat shock protein binding	9.85E-03
51	GO:0009982: pseudouridine synthase activity	9.85E-03
52	GO:0000175: 3'-5'-exoribonuclease activity	9.85E-03
53	GO:0051287: NAD binding	1.04E-02
54	GO:0008131: primary amine oxidase activity	1.07E-02
55	GO:0008061: chitin binding	1.16E-02
56	GO:0003690: double-stranded DNA binding	1.20E-02
57	GO:0003887: DNA-directed DNA polymerase activity	1.25E-02
58	GO:0051536: iron-sulfur cluster binding	1.35E-02
59	GO:0005345: purine nucleobase transmembrane transporter activity	1.45E-02
60	GO:0022891: substrate-specific transmembrane transporter activity	1.76E-02
61	GO:0003727: single-stranded RNA binding	1.86E-02
62	GO:0008080: N-acetyltransferase activity	2.20E-02
63	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	2.20E-02
64	GO:0004872: receptor activity	2.43E-02
65	GO:0004518: nuclease activity	2.68E-02
66	GO:0008483: transaminase activity	3.06E-02
67	GO:0005200: structural constituent of cytoskeleton	3.06E-02
68	GO:0016168: chlorophyll binding	3.46E-02
69	GO:0042802: identical protein binding	3.64E-02
70	GO:0008236: serine-type peptidase activity	3.87E-02
71	GO:0008168: methyltransferase activity	4.26E-02
72	GO:0000287: magnesium ion binding	4.34E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.86E-28
2	GO:0009535: chloroplast thylakoid membrane	3.21E-15
3	GO:0009570: chloroplast stroma	4.41E-09
4	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.09E-05
5	GO:0009579: thylakoid	2.99E-04
6	GO:0009706: chloroplast inner membrane	4.54E-04
7	GO:0009536: plastid	4.55E-04
8	GO:0008274: gamma-tubulin ring complex	5.68E-04
9	GO:0080085: signal recognition particle, chloroplast targeting	5.68E-04
10	GO:0031969: chloroplast membrane	5.95E-04
11	GO:0009941: chloroplast envelope	6.16E-04
12	GO:0009543: chloroplast thylakoid lumen	6.42E-04
13	GO:0009528: plastid inner membrane	9.22E-04
14	GO:0009573: chloroplast ribulose bisphosphate carboxylase complex	9.22E-04
15	GO:0033281: TAT protein transport complex	9.22E-04
16	GO:0016605: PML body	9.22E-04
17	GO:0000923: equatorial microtubule organizing center	1.32E-03
18	GO:0030286: dynein complex	1.76E-03
19	GO:0055035: plastid thylakoid membrane	2.25E-03
20	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	2.77E-03
21	GO:0009840: chloroplastic endopeptidase Clp complex	3.33E-03
22	GO:0005655: nucleolar ribonuclease P complex	3.33E-03
23	GO:0000123: histone acetyltransferase complex	3.93E-03
24	GO:0031359: integral component of chloroplast outer membrane	3.93E-03
25	GO:0009534: chloroplast thylakoid	4.49E-03
26	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	5.22E-03
27	GO:0009707: chloroplast outer membrane	5.25E-03
28	GO:0000922: spindle pole	5.92E-03
29	GO:0016604: nuclear body	6.64E-03
30	GO:0016324: apical plasma membrane	7.40E-03
31	GO:0048471: perinuclear region of cytoplasm	8.19E-03
32	GO:0009508: plastid chromosome	9.85E-03
33	GO:0030095: chloroplast photosystem II	1.07E-02
34	GO:0043234: protein complex	1.25E-02
35	GO:0005875: microtubule associated complex	1.25E-02
36	GO:0042651: thylakoid membrane	1.45E-02
37	GO:0015935: small ribosomal subunit	1.55E-02
38	GO:0009505: plant-type cell wall	1.63E-02
39	GO:0005623: cell	2.13E-02
40	GO:0009523: photosystem II	2.43E-02
41	GO:0010319: stromule	3.06E-02
42	GO:0009295: nucleoid	3.06E-02