GO Enrichment Analysis of Co-expressed Genes with
AT5G08740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009661: chromoplast organization | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0051246: regulation of protein metabolic process | 0.00E+00 |
| 4 | GO:0080005: photosystem stoichiometry adjustment | 1.05E-07 |
| 5 | GO:0016120: carotene biosynthetic process | 3.25E-06 |
| 6 | GO:0009657: plastid organization | 1.76E-05 |
| 7 | GO:0031426: polycistronic mRNA processing | 4.04E-05 |
| 8 | GO:0071461: cellular response to redox state | 4.04E-05 |
| 9 | GO:0006436: tryptophanyl-tRNA aminoacylation | 4.04E-05 |
| 10 | GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 4.04E-05 |
| 11 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.00E-04 |
| 12 | GO:0010343: singlet oxygen-mediated programmed cell death | 1.00E-04 |
| 13 | GO:0006695: cholesterol biosynthetic process | 1.00E-04 |
| 14 | GO:0034755: iron ion transmembrane transport | 1.00E-04 |
| 15 | GO:0016226: iron-sulfur cluster assembly | 1.25E-04 |
| 16 | GO:0051604: protein maturation | 1.73E-04 |
| 17 | GO:0006013: mannose metabolic process | 1.73E-04 |
| 18 | GO:0009791: post-embryonic development | 2.26E-04 |
| 19 | GO:2001141: regulation of RNA biosynthetic process | 2.55E-04 |
| 20 | GO:0010239: chloroplast mRNA processing | 2.55E-04 |
| 21 | GO:0006809: nitric oxide biosynthetic process | 2.55E-04 |
| 22 | GO:0009765: photosynthesis, light harvesting | 3.43E-04 |
| 23 | GO:0010027: thylakoid membrane organization | 3.52E-04 |
| 24 | GO:0000304: response to singlet oxygen | 4.37E-04 |
| 25 | GO:0016123: xanthophyll biosynthetic process | 4.37E-04 |
| 26 | GO:0006655: phosphatidylglycerol biosynthetic process | 5.37E-04 |
| 27 | GO:0010190: cytochrome b6f complex assembly | 5.37E-04 |
| 28 | GO:0001522: pseudouridine synthesis | 8.61E-04 |
| 29 | GO:0050821: protein stabilization | 8.61E-04 |
| 30 | GO:0048564: photosystem I assembly | 8.61E-04 |
| 31 | GO:0071482: cellular response to light stimulus | 9.77E-04 |
| 32 | GO:0033384: geranyl diphosphate biosynthetic process | 1.10E-03 |
| 33 | GO:0006783: heme biosynthetic process | 1.10E-03 |
| 34 | GO:0045337: farnesyl diphosphate biosynthetic process | 1.10E-03 |
| 35 | GO:0048507: meristem development | 1.10E-03 |
| 36 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.22E-03 |
| 37 | GO:0045036: protein targeting to chloroplast | 1.35E-03 |
| 38 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.35E-03 |
| 39 | GO:0006879: cellular iron ion homeostasis | 1.49E-03 |
| 40 | GO:0006352: DNA-templated transcription, initiation | 1.49E-03 |
| 41 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.63E-03 |
| 42 | GO:0055114: oxidation-reduction process | 2.02E-03 |
| 43 | GO:0006418: tRNA aminoacylation for protein translation | 2.55E-03 |
| 44 | GO:0003333: amino acid transmembrane transport | 2.72E-03 |
| 45 | GO:0010468: regulation of gene expression | 2.76E-03 |
| 46 | GO:0016117: carotenoid biosynthetic process | 3.42E-03 |
| 47 | GO:0009658: chloroplast organization | 3.57E-03 |
| 48 | GO:0006662: glycerol ether metabolic process | 3.80E-03 |
| 49 | GO:0010193: response to ozone | 4.38E-03 |
| 50 | GO:0045454: cell redox homeostasis | 5.28E-03 |
| 51 | GO:0009816: defense response to bacterium, incompatible interaction | 5.86E-03 |
| 52 | GO:0015995: chlorophyll biosynthetic process | 6.31E-03 |
| 53 | GO:0048481: plant ovule development | 6.77E-03 |
| 54 | GO:0007568: aging | 7.49E-03 |
| 55 | GO:0034599: cellular response to oxidative stress | 8.24E-03 |
| 56 | GO:0010114: response to red light | 9.53E-03 |
| 57 | GO:0009416: response to light stimulus | 1.16E-02 |
| 58 | GO:0006417: regulation of translation | 1.26E-02 |
| 59 | GO:0006457: protein folding | 1.50E-02 |
| 60 | GO:0006396: RNA processing | 1.54E-02 |
| 61 | GO:0006508: proteolysis | 1.79E-02 |
| 62 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.30E-02 |
| 63 | GO:0006979: response to oxidative stress | 2.37E-02 |
| 64 | GO:0048366: leaf development | 3.41E-02 |
| 65 | GO:0046686: response to cadmium ion | 3.65E-02 |
| 66 | GO:0046777: protein autophosphorylation | 3.71E-02 |
| 67 | GO:0016042: lipid catabolic process | 4.57E-02 |
| 68 | GO:0006281: DNA repair | 4.67E-02 |
| 69 | GO:0006397: mRNA processing | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 2 | GO:0004830: tryptophan-tRNA ligase activity | 4.04E-05 |
| 3 | GO:0030941: chloroplast targeting sequence binding | 4.04E-05 |
| 4 | GO:0008883: glutamyl-tRNA reductase activity | 1.00E-04 |
| 5 | GO:0004047: aminomethyltransferase activity | 1.00E-04 |
| 6 | GO:0004176: ATP-dependent peptidase activity | 1.13E-04 |
| 7 | GO:0004096: catalase activity | 1.73E-04 |
| 8 | GO:0003913: DNA photolyase activity | 1.73E-04 |
| 9 | GO:0032947: protein complex scaffold | 1.73E-04 |
| 10 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.73E-04 |
| 11 | GO:0048027: mRNA 5'-UTR binding | 2.55E-04 |
| 12 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 3.43E-04 |
| 13 | GO:0001053: plastid sigma factor activity | 3.43E-04 |
| 14 | GO:0051861: glycolipid binding | 3.43E-04 |
| 15 | GO:0016987: sigma factor activity | 3.43E-04 |
| 16 | GO:0004559: alpha-mannosidase activity | 6.40E-04 |
| 17 | GO:0004337: geranyltranstransferase activity | 1.10E-03 |
| 18 | GO:0005381: iron ion transmembrane transporter activity | 1.22E-03 |
| 19 | GO:0015174: basic amino acid transmembrane transporter activity | 1.22E-03 |
| 20 | GO:0004161: dimethylallyltranstransferase activity | 1.49E-03 |
| 21 | GO:0009982: pseudouridine synthase activity | 1.77E-03 |
| 22 | GO:0051536: iron-sulfur cluster binding | 2.39E-03 |
| 23 | GO:0003727: single-stranded RNA binding | 3.24E-03 |
| 24 | GO:0047134: protein-disulfide reductase activity | 3.42E-03 |
| 25 | GO:0004812: aminoacyl-tRNA ligase activity | 3.42E-03 |
| 26 | GO:0008080: N-acetyltransferase activity | 3.80E-03 |
| 27 | GO:0004791: thioredoxin-disulfide reductase activity | 3.99E-03 |
| 28 | GO:0010181: FMN binding | 3.99E-03 |
| 29 | GO:0008233: peptidase activity | 4.34E-03 |
| 30 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 4.79E-03 |
| 31 | GO:0008237: metallopeptidase activity | 5.21E-03 |
| 32 | GO:0008236: serine-type peptidase activity | 6.54E-03 |
| 33 | GO:0004222: metalloendopeptidase activity | 7.25E-03 |
| 34 | GO:0050897: cobalt ion binding | 7.49E-03 |
| 35 | GO:0050661: NADP binding | 8.75E-03 |
| 36 | GO:0043621: protein self-association | 1.01E-02 |
| 37 | GO:0005198: structural molecule activity | 1.03E-02 |
| 38 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.18E-02 |
| 39 | GO:0015171: amino acid transmembrane transporter activity | 1.26E-02 |
| 40 | GO:0015035: protein disulfide oxidoreductase activity | 1.54E-02 |
| 41 | GO:0016746: transferase activity, transferring acyl groups | 1.54E-02 |
| 42 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.80E-02 |
| 43 | GO:0005506: iron ion binding | 2.31E-02 |
| 44 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.64E-02 |
| 45 | GO:0016788: hydrolase activity, acting on ester bonds | 3.08E-02 |
| 46 | GO:0016491: oxidoreductase activity | 3.09E-02 |
| 47 | GO:0050660: flavin adenine dinucleotide binding | 3.37E-02 |
| 48 | GO:0052689: carboxylic ester hydrolase activity | 3.80E-02 |
| 49 | GO:0003924: GTPase activity | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.77E-14 |
| 2 | GO:0031969: chloroplast membrane | 6.73E-08 |
| 3 | GO:0009526: plastid envelope | 3.43E-04 |
| 4 | GO:0055035: plastid thylakoid membrane | 4.37E-04 |
| 5 | GO:0009941: chloroplast envelope | 4.45E-04 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 5.22E-04 |
| 7 | GO:0031359: integral component of chloroplast outer membrane | 7.49E-04 |
| 8 | GO:0042644: chloroplast nucleoid | 1.10E-03 |
| 9 | GO:0043234: protein complex | 2.23E-03 |
| 10 | GO:0009534: chloroplast thylakoid | 2.24E-03 |
| 11 | GO:0042651: thylakoid membrane | 2.55E-03 |
| 12 | GO:0009570: chloroplast stroma | 3.41E-03 |
| 13 | GO:0009707: chloroplast outer membrane | 6.77E-03 |
| 14 | GO:0031977: thylakoid lumen | 9.01E-03 |
| 15 | GO:0031966: mitochondrial membrane | 1.12E-02 |
| 16 | GO:0005635: nuclear envelope | 1.23E-02 |
| 17 | GO:0005747: mitochondrial respiratory chain complex I | 1.35E-02 |
| 18 | GO:0005759: mitochondrial matrix | 2.08E-02 |
| 19 | GO:0009536: plastid | 2.88E-02 |
| 20 | GO:0009505: plant-type cell wall | 2.94E-02 |
| 21 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.24E-02 |