Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G05987

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035269: protein O-linked mannosylation0.00E+00
2GO:1990569: UDP-N-acetylglucosamine transmembrane transport0.00E+00
3GO:0015789: UDP-N-acetylgalactosamine transport0.00E+00
4GO:1901799: negative regulation of proteasomal protein catabolic process0.00E+00
5GO:0001881: receptor recycling0.00E+00
6GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process0.00E+00
7GO:1903857: negative regulation of cytokinin dehydrogenase activity0.00E+00
8GO:0009264: deoxyribonucleotide catabolic process0.00E+00
9GO:0006511: ubiquitin-dependent protein catabolic process4.65E-09
10GO:0043248: proteasome assembly4.69E-05
11GO:0015991: ATP hydrolysis coupled proton transport7.02E-05
12GO:0006506: GPI anchor biosynthetic process1.13E-04
13GO:0006914: autophagy1.43E-04
14GO:0015786: UDP-glucose transport3.55E-04
15GO:0045905: positive regulation of translational termination3.55E-04
16GO:0043132: NAD transport3.55E-04
17GO:0045901: positive regulation of translational elongation3.55E-04
18GO:0006123: mitochondrial electron transport, cytochrome c to oxygen3.55E-04
19GO:0006452: translational frameshifting3.55E-04
20GO:0051788: response to misfolded protein3.55E-04
21GO:0008333: endosome to lysosome transport5.82E-04
22GO:0044375: regulation of peroxisome size5.82E-04
23GO:0015783: GDP-fucose transport5.82E-04
24GO:0015992: proton transport7.05E-04
25GO:0051603: proteolysis involved in cellular protein catabolic process7.67E-04
26GO:0015858: nucleoside transport8.33E-04
27GO:0009647: skotomorphogenesis8.33E-04
28GO:0006168: adenine salvage8.33E-04
29GO:0071786: endoplasmic reticulum tubular network organization8.33E-04
30GO:0046836: glycolipid transport8.33E-04
31GO:0006166: purine ribonucleoside salvage8.33E-04
32GO:0072334: UDP-galactose transmembrane transport8.33E-04
33GO:0006412: translation8.72E-04
34GO:0010363: regulation of plant-type hypersensitive response1.10E-03
35GO:0006621: protein retention in ER lumen1.10E-03
36GO:0006623: protein targeting to vacuole1.30E-03
37GO:0009697: salicylic acid biosynthetic process1.40E-03
38GO:0010117: photoprotection1.40E-03
39GO:0097428: protein maturation by iron-sulfur cluster transfer1.40E-03
40GO:0007029: endoplasmic reticulum organization1.40E-03
41GO:1902183: regulation of shoot apical meristem development1.40E-03
42GO:0044209: AMP salvage1.40E-03
43GO:0030163: protein catabolic process1.58E-03
44GO:0045040: protein import into mitochondrial outer membrane1.72E-03
45GO:0002238: response to molecule of fungal origin1.72E-03
46GO:0006121: mitochondrial electron transport, succinate to ubiquinone1.72E-03
47GO:0001731: formation of translation preinitiation complex1.72E-03
48GO:0098655: cation transmembrane transport2.06E-03
49GO:0009554: megasporogenesis2.06E-03
50GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c2.42E-03
51GO:0022904: respiratory electron transport chain2.42E-03
52GO:0048528: post-embryonic root development2.42E-03
53GO:0006744: ubiquinone biosynthetic process2.42E-03
54GO:1900056: negative regulation of leaf senescence2.42E-03
55GO:0009690: cytokinin metabolic process2.80E-03
56GO:0031540: regulation of anthocyanin biosynthetic process2.80E-03
57GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline2.80E-03
58GO:0010043: response to zinc ion2.99E-03
59GO:0010204: defense response signaling pathway, resistance gene-independent3.21E-03
60GO:0006972: hyperosmotic response3.21E-03
61GO:0009853: photorespiration3.27E-03
62GO:0010206: photosystem II repair3.63E-03
63GO:0009060: aerobic respiration3.63E-03
64GO:0015780: nucleotide-sugar transport3.63E-03
65GO:0098656: anion transmembrane transport3.63E-03
66GO:0046685: response to arsenic-containing substance3.63E-03
67GO:0006839: mitochondrial transport3.73E-03
68GO:0042254: ribosome biogenesis4.02E-03
69GO:0030042: actin filament depolymerization4.06E-03
70GO:0009870: defense response signaling pathway, resistance gene-dependent4.52E-03
71GO:0043069: negative regulation of programmed cell death4.52E-03
72GO:0015031: protein transport4.78E-03
73GO:0071365: cellular response to auxin stimulus5.48E-03
74GO:0008361: regulation of cell size5.48E-03
75GO:0006820: anion transport5.48E-03
76GO:0006626: protein targeting to mitochondrion5.98E-03
77GO:0006810: transport6.15E-03
78GO:0007034: vacuolar transport6.50E-03
79GO:0006446: regulation of translational initiation6.50E-03
80GO:0007033: vacuole organization7.04E-03
81GO:0007030: Golgi organization7.04E-03
82GO:0010167: response to nitrate7.04E-03
83GO:0034976: response to endoplasmic reticulum stress7.59E-03
84GO:0006406: mRNA export from nucleus8.16E-03
85GO:0006487: protein N-linked glycosylation8.16E-03
86GO:0009116: nucleoside metabolic process8.16E-03
87GO:0009651: response to salt stress8.69E-03
88GO:0008299: isoprenoid biosynthetic process8.74E-03
89GO:0061077: chaperone-mediated protein folding9.34E-03
90GO:0019722: calcium-mediated signaling1.12E-02
91GO:0010089: xylem development1.12E-02
92GO:0010584: pollen exine formation1.12E-02
93GO:0042147: retrograde transport, endosome to Golgi1.19E-02
94GO:0010118: stomatal movement1.25E-02
95GO:0006413: translational initiation1.30E-02
96GO:0015986: ATP synthesis coupled proton transport1.39E-02
97GO:0007623: circadian rhythm1.40E-02
98GO:0048825: cotyledon development1.46E-02
99GO:0009791: post-embryonic development1.46E-02
100GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.56E-02
101GO:0006906: vesicle fusion2.16E-02
102GO:0006950: response to stress2.24E-02
103GO:0009832: plant-type cell wall biogenesis2.50E-02
104GO:0009723: response to ethylene2.51E-02
105GO:0006499: N-terminal protein myristoylation2.58E-02
106GO:0000724: double-strand break repair via homologous recombination2.76E-02
107GO:0016192: vesicle-mediated transport2.83E-02
108GO:0045087: innate immune response2.85E-02
109GO:0006099: tricarboxylic acid cycle2.94E-02
110GO:0006887: exocytosis3.22E-02
111GO:0008283: cell proliferation3.42E-02
112GO:0008643: carbohydrate transport3.61E-02
113GO:0006855: drug transmembrane transport3.81E-02
114GO:0006812: cation transport4.01E-02
115GO:0006486: protein glycosylation4.22E-02
116GO:0009736: cytokinin-activated signaling pathway4.22E-02
117GO:0009909: regulation of flower development4.54E-02
RankGO TermAdjusted P value
1GO:0044610: FMN transmembrane transporter activity0.00E+00
2GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity0.00E+00
3GO:0004298: threonine-type endopeptidase activity7.29E-15
4GO:0008233: peptidase activity2.93E-09
5GO:0003735: structural constituent of ribosome5.17E-05
6GO:0005347: ATP transmembrane transporter activity6.56E-05
7GO:0019786: Atg8-specific protease activity1.56E-04
8GO:0015230: FAD transmembrane transporter activity1.56E-04
9GO:0046961: proton-transporting ATPase activity, rotational mechanism2.86E-04
10GO:0019779: Atg8 activating enzyme activity3.55E-04
11GO:0008517: folic acid transporter activity3.55E-04
12GO:0015228: coenzyme A transmembrane transporter activity3.55E-04
13GO:0004582: dolichyl-phosphate beta-D-mannosyltransferase activity3.55E-04
14GO:0051724: NAD transporter activity3.55E-04
15GO:0050347: trans-octaprenyltranstransferase activity3.55E-04
16GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity3.55E-04
17GO:0008253: 5'-nucleotidase activity5.82E-04
18GO:0005457: GDP-fucose transmembrane transporter activity5.82E-04
19GO:0003999: adenine phosphoribosyltransferase activity8.33E-04
20GO:0022890: inorganic cation transmembrane transporter activity8.33E-04
21GO:0005460: UDP-glucose transmembrane transporter activity8.33E-04
22GO:0017089: glycolipid transporter activity8.33E-04
23GO:0004576: oligosaccharyl transferase activity1.10E-03
24GO:0019776: Atg8 ligase activity1.10E-03
25GO:0016004: phospholipase activator activity1.10E-03
26GO:0004659: prenyltransferase activity1.10E-03
27GO:0015368: calcium:cation antiporter activity1.10E-03
28GO:0051861: glycolipid binding1.10E-03
29GO:0015369: calcium:proton antiporter activity1.10E-03
30GO:0046923: ER retention sequence binding1.10E-03
31GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances1.10E-03
32GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.40E-03
33GO:0080122: AMP transmembrane transporter activity1.40E-03
34GO:0000104: succinate dehydrogenase activity1.40E-03
35GO:0008177: succinate dehydrogenase (ubiquinone) activity1.40E-03
36GO:0051538: 3 iron, 4 sulfur cluster binding1.40E-03
37GO:0005459: UDP-galactose transmembrane transporter activity1.40E-03
38GO:0010427: abscisic acid binding1.72E-03
39GO:0004656: procollagen-proline 4-dioxygenase activity2.06E-03
40GO:0051020: GTPase binding2.06E-03
41GO:0015217: ADP transmembrane transporter activity2.06E-03
42GO:0005338: nucleotide-sugar transmembrane transporter activity2.42E-03
43GO:0003743: translation initiation factor activity2.75E-03
44GO:0043022: ribosome binding2.80E-03
45GO:0015491: cation:cation antiporter activity2.80E-03
46GO:0015288: porin activity2.80E-03
47GO:0015078: hydrogen ion transmembrane transporter activity3.21E-03
48GO:0008308: voltage-gated anion channel activity3.21E-03
49GO:0003746: translation elongation factor activity3.27E-03
50GO:0045309: protein phosphorylated amino acid binding4.06E-03
51GO:0019904: protein domain specific binding4.99E-03
52GO:0008559: xenobiotic-transporting ATPase activity4.99E-03
53GO:0004161: dimethylallyltranstransferase activity4.99E-03
54GO:0031418: L-ascorbic acid binding8.16E-03
55GO:0005528: FK506 binding8.16E-03
56GO:0003756: protein disulfide isomerase activity1.12E-02
57GO:0008514: organic anion transmembrane transporter activity1.12E-02
58GO:0004872: receptor activity1.46E-02
59GO:0008017: microtubule binding1.46E-02
60GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.78E-02
61GO:0004721: phosphoprotein phosphatase activity2.24E-02
62GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.41E-02
63GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.85E-02
64GO:0000149: SNARE binding3.04E-02
65GO:0051539: 4 iron, 4 sulfur cluster binding3.13E-02
66GO:0004364: glutathione transferase activity3.32E-02
67GO:0005484: SNAP receptor activity3.42E-02
68GO:0051537: 2 iron, 2 sulfur cluster binding3.61E-02
69GO:0005198: structural molecule activity3.71E-02
70GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.81E-02
71GO:0009055: electron carrier activity4.24E-02
72GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.86E-02
RankGO TermAdjusted P value
1GO:0000502: proteasome complex1.50E-19
2GO:0005839: proteasome core complex7.29E-15
3GO:0005774: vacuolar membrane4.32E-10
4GO:0019773: proteasome core complex, alpha-subunit complex1.68E-08
5GO:0000421: autophagosome membrane1.55E-06
6GO:0022626: cytosolic ribosome2.30E-06
7GO:0005773: vacuole3.09E-06
8GO:0031410: cytoplasmic vesicle4.18E-05
9GO:0005829: cytosol1.25E-04
10GO:0009510: plasmodesmatal desmotubule1.56E-04
11GO:0019774: proteasome core complex, beta-subunit complex1.56E-04
12GO:0072546: ER membrane protein complex1.56E-04
13GO:0022625: cytosolic large ribosomal subunit1.70E-04
14GO:0031901: early endosome membrane1.73E-04
15GO:0005840: ribosome2.08E-04
16GO:0008541: proteasome regulatory particle, lid subcomplex2.86E-04
17GO:0000325: plant-type vacuole3.23E-04
18GO:0033185: dolichol-phosphate-mannose synthase complex3.55E-04
19GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain3.55E-04
20GO:0045281: succinate dehydrogenase complex3.55E-04
21GO:0005789: endoplasmic reticulum membrane5.06E-04
22GO:0046861: glyoxysomal membrane5.82E-04
23GO:0005794: Golgi apparatus5.95E-04
24GO:0045271: respiratory chain complex I6.43E-04
25GO:0005783: endoplasmic reticulum6.53E-04
26GO:0005741: mitochondrial outer membrane7.05E-04
27GO:0033180: proton-transporting V-type ATPase, V1 domain8.33E-04
28GO:0071782: endoplasmic reticulum tubular network8.33E-04
29GO:0005775: vacuolar lumen8.33E-04
30GO:0033179: proton-transporting V-type ATPase, V0 domain1.10E-03
31GO:0009526: plastid envelope1.10E-03
32GO:0005776: autophagosome1.10E-03
33GO:0016471: vacuolar proton-transporting V-type ATPase complex1.10E-03
34GO:0008250: oligosaccharyltransferase complex1.40E-03
35GO:0016282: eukaryotic 43S preinitiation complex1.72E-03
36GO:0000974: Prp19 complex1.72E-03
37GO:0005771: multivesicular body1.72E-03
38GO:0030904: retromer complex1.72E-03
39GO:0033290: eukaryotic 48S preinitiation complex2.06E-03
40GO:0005788: endoplasmic reticulum lumen2.11E-03
41GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane2.80E-03
42GO:0045273: respiratory chain complex II2.80E-03
43GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)2.80E-03
44GO:0046930: pore complex3.21E-03
45GO:0009514: glyoxysome3.21E-03
46GO:0005779: integral component of peroxisomal membrane3.21E-03
47GO:0005742: mitochondrial outer membrane translocase complex3.21E-03
48GO:0022627: cytosolic small ribosomal subunit3.22E-03
49GO:0071011: precatalytic spliceosome4.06E-03
50GO:0005737: cytoplasm4.46E-03
51GO:0005874: microtubule4.93E-03
52GO:0071013: catalytic step 2 spliceosome4.99E-03
53GO:0031966: mitochondrial membrane5.28E-03
54GO:0005750: mitochondrial respiratory chain complex III6.50E-03
55GO:0005747: mitochondrial respiratory chain complex I6.91E-03
56GO:0005753: mitochondrial proton-transporting ATP synthase complex7.04E-03
57GO:0005769: early endosome7.59E-03
58GO:0005743: mitochondrial inner membrane7.71E-03
59GO:0005758: mitochondrial intermembrane space8.16E-03
60GO:0042651: thylakoid membrane8.74E-03
61GO:0070469: respiratory chain8.74E-03
62GO:0015935: small ribosomal subunit9.34E-03
63GO:0015629: actin cytoskeleton1.06E-02
64GO:0005744: mitochondrial inner membrane presequence translocase complex1.12E-02
65GO:0009705: plant-type vacuole membrane1.40E-02
66GO:0009504: cell plate1.46E-02
67GO:0005778: peroxisomal membrane1.84E-02
68GO:0000139: Golgi membrane1.87E-02
69GO:0005730: nucleolus2.60E-02
70GO:0015934: large ribosomal subunit2.67E-02
71GO:0031902: late endosome membrane3.22E-02
72GO:0031201: SNARE complex3.22E-02
73GO:0043231: intracellular membrane-bounded organelle4.36E-02
74GO:0016021: integral component of membrane4.83E-02
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Gene type



Gene DE type