co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G05780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
2	GO:0006511: ubiquitin-dependent protein catabolic process	5.47E-29
3	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	9.85E-12
4	GO:0051603: proteolysis involved in cellular protein catabolic process	2.05E-10
5	GO:0030433: ubiquitin-dependent ERAD pathway	8.65E-09
6	GO:0046686: response to cadmium ion	5.75E-08
7	GO:0051788: response to misfolded protein	7.18E-08
8	GO:0043248: proteasome assembly	3.53E-06
9	GO:0030163: protein catabolic process	4.76E-06
10	GO:0006106: fumarate metabolic process	3.25E-05
11	GO:0035266: meristem growth	3.25E-05
12	GO:0007292: female gamete generation	3.25E-05
13	GO:0006434: seryl-tRNA aminoacylation	3.25E-05
14	GO:0006431: methionyl-tRNA aminoacylation	3.25E-05
15	GO:0042964: thioredoxin reduction	3.25E-05
16	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	3.25E-05
17	GO:0045454: cell redox homeostasis	3.80E-05
18	GO:0034976: response to endoplasmic reticulum stress	5.92E-05
19	GO:0009156: ribonucleoside monophosphate biosynthetic process	8.18E-05
20	GO:0015786: UDP-glucose transport	8.18E-05
21	GO:0015783: GDP-fucose transport	1.42E-04
22	GO:0060968: regulation of gene silencing	1.42E-04
23	GO:0055074: calcium ion homeostasis	1.42E-04
24	GO:0048868: pollen tube development	1.45E-04
25	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.83E-04
26	GO:0001676: long-chain fatty acid metabolic process	2.11E-04
27	GO:0072334: UDP-galactose transmembrane transport	2.11E-04
28	GO:0009647: skotomorphogenesis	2.11E-04
29	GO:0009165: nucleotide biosynthetic process	2.85E-04
30	GO:0010363: regulation of plant-type hypersensitive response	2.85E-04
31	GO:0010043: response to zinc ion	4.03E-04
32	GO:0048827: phyllome development	4.48E-04
33	GO:0048232: male gamete generation	4.48E-04
34	GO:0042176: regulation of protein catabolic process	4.48E-04
35	GO:0048528: post-embryonic root development	6.27E-04
36	GO:0010078: maintenance of root meristem identity	7.22E-04
37	GO:0031540: regulation of anthocyanin biosynthetic process	7.22E-04
38	GO:0019430: removal of superoxide radicals	8.20E-04
39	GO:0098656: anion transmembrane transport	9.20E-04
40	GO:0046685: response to arsenic-containing substance	9.20E-04
41	GO:0048829: root cap development	1.13E-03
42	GO:0010015: root morphogenesis	1.24E-03
43	GO:0006820: anion transport	1.36E-03
44	GO:0045037: protein import into chloroplast stroma	1.36E-03
45	GO:0006108: malate metabolic process	1.47E-03
46	GO:0010102: lateral root morphogenesis	1.47E-03
47	GO:0009933: meristem structural organization	1.60E-03
48	GO:0090351: seedling development	1.72E-03
49	GO:0006457: protein folding	1.72E-03
50	GO:0009116: nucleoside metabolic process	1.99E-03
51	GO:0042147: retrograde transport, endosome to Golgi	2.84E-03
52	GO:0009651: response to salt stress	3.06E-03
53	GO:0048825: cotyledon development	3.47E-03
54	GO:0010193: response to ozone	3.63E-03
55	GO:0009567: double fertilization forming a zygote and endosperm	4.14E-03
56	GO:0009408: response to heat	4.94E-03
57	GO:0016049: cell growth	5.41E-03
58	GO:0009817: defense response to fungus, incompatible interaction	5.60E-03
59	GO:0010311: lateral root formation	5.80E-03
60	GO:0006499: N-terminal protein myristoylation	5.99E-03
61	GO:0045087: innate immune response	6.60E-03
62	GO:0006099: tricarboxylic acid cycle	6.80E-03
63	GO:0007275: multicellular organism development	7.12E-03
64	GO:0006631: fatty acid metabolic process	7.43E-03
65	GO:0009926: auxin polar transport	7.87E-03
66	GO:0009965: leaf morphogenesis	8.53E-03
67	GO:0009793: embryo development ending in seed dormancy	8.75E-03
68	GO:0006812: cation transport	9.22E-03
69	GO:0009846: pollen germination	9.22E-03
70	GO:0009736: cytokinin-activated signaling pathway	9.69E-03
71	GO:0048367: shoot system development	1.11E-02
72	GO:0048316: seed development	1.11E-02
73	GO:0009553: embryo sac development	1.22E-02
74	GO:0006979: response to oxidative stress	1.79E-02
75	GO:0009617: response to bacterium	2.07E-02
76	GO:0048366: leaf development	2.80E-02
77	GO:0006886: intracellular protein transport	3.38E-02
78	GO:0048364: root development	3.96E-02

Rank	GO Term	Adjusted P value
1	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
2	GO:0004298: threonine-type endopeptidase activity	2.87E-24
3	GO:0008233: peptidase activity	2.21E-15
4	GO:0036402: proteasome-activating ATPase activity	9.85E-12
5	GO:0017025: TBP-class protein binding	2.57E-09
6	GO:0016887: ATPase activity	8.50E-06
7	GO:0004825: methionine-tRNA ligase activity	3.25E-05
8	GO:0004333: fumarate hydratase activity	3.25E-05
9	GO:0010013: N-1-naphthylphthalamic acid binding	3.25E-05
10	GO:0004828: serine-tRNA ligase activity	3.25E-05
11	GO:0003756: protein disulfide isomerase activity	1.12E-04
12	GO:0005457: GDP-fucose transmembrane transporter activity	1.42E-04
13	GO:0008253: 5'-nucleotidase activity	1.42E-04
14	GO:0004148: dihydrolipoyl dehydrogenase activity	1.42E-04
15	GO:0005460: UDP-glucose transmembrane transporter activity	2.11E-04
16	GO:0004749: ribose phosphate diphosphokinase activity	2.11E-04
17	GO:0015368: calcium:cation antiporter activity	2.85E-04
18	GO:0015369: calcium:proton antiporter activity	2.85E-04
19	GO:0005459: UDP-galactose transmembrane transporter activity	3.65E-04
20	GO:0102391: decanoate--CoA ligase activity	5.36E-04
21	GO:0004467: long-chain fatty acid-CoA ligase activity	6.27E-04
22	GO:0015491: cation:cation antiporter activity	7.22E-04
23	GO:0015288: porin activity	7.22E-04
24	GO:0008308: voltage-gated anion channel activity	8.20E-04
25	GO:0030234: enzyme regulator activity	1.13E-03
26	GO:0004177: aminopeptidase activity	1.24E-03
27	GO:0000049: tRNA binding	1.36E-03
28	GO:0005524: ATP binding	1.44E-03
29	GO:0004175: endopeptidase activity	1.60E-03
30	GO:0008514: organic anion transmembrane transporter activity	2.69E-03
31	GO:0004791: thioredoxin-disulfide reductase activity	3.31E-03
32	GO:0016853: isomerase activity	3.31E-03
33	GO:0050897: cobalt ion binding	6.19E-03
34	GO:0003746: translation elongation factor activity	6.60E-03
35	GO:0051082: unfolded protein binding	1.24E-02
36	GO:0008565: protein transporter activity	1.65E-02
37	GO:0000287: magnesium ion binding	2.46E-02
38	GO:0050660: flavin adenine dinucleotide binding	2.77E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	9.72E-47
2	GO:0005839: proteasome core complex	2.87E-24
3	GO:0031595: nuclear proteasome complex	5.47E-14
4	GO:0005829: cytosol	8.99E-14
5	GO:0008541: proteasome regulatory particle, lid subcomplex	2.04E-12
6	GO:0031597: cytosolic proteasome complex	2.20E-11
7	GO:0019773: proteasome core complex, alpha-subunit complex	1.36E-10
8	GO:0008540: proteasome regulatory particle, base subcomplex	3.41E-10
9	GO:0045239: tricarboxylic acid cycle enzyme complex	3.25E-05
10	GO:0046861: glyoxysomal membrane	1.42E-04
11	GO:0005788: endoplasmic reticulum lumen	2.83E-04
12	GO:0030904: retromer complex	4.48E-04
13	GO:0005737: cytoplasm	5.31E-04
14	GO:0005774: vacuolar membrane	6.81E-04
15	GO:0046930: pore complex	8.20E-04
16	GO:0009514: glyoxysome	8.20E-04
17	GO:0022626: cytosolic ribosome	1.18E-03
18	GO:0005759: mitochondrial matrix	1.62E-03
19	GO:0009506: plasmodesma	1.95E-03
20	GO:0005741: mitochondrial outer membrane	2.26E-03
21	GO:0048046: apoplast	3.46E-03
22	GO:0016592: mediator complex	3.80E-03
23	GO:0031902: late endosome membrane	7.43E-03
24	GO:0005634: nucleus	8.07E-03
25	GO:0005747: mitochondrial respiratory chain complex I	1.11E-02
26	GO:0009706: chloroplast inner membrane	1.24E-02
27	GO:0005623: cell	1.48E-02
28	GO:0005618: cell wall	1.73E-02
29	GO:0009705: plant-type vacuole membrane	1.83E-02
30	GO:0009505: plant-type cell wall	2.23E-02
31	GO:0005773: vacuole	2.50E-02
32	GO:0005783: endoplasmic reticulum	3.52E-02
33	GO:0005886: plasma membrane	3.66E-02