co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G04870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042353: fucose biosynthetic process	0.00E+00
2	GO:0032497: detection of lipopolysaccharide	0.00E+00
3	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
4	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
5	GO:0010046: response to mycotoxin	0.00E+00
6	GO:0035420: MAPK cascade involved in innate immune response	0.00E+00
7	GO:0032499: detection of peptidoglycan	0.00E+00
8	GO:2001143: N-methylnicotinate transport	0.00E+00
9	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
10	GO:0046398: UDP-glucuronate metabolic process	0.00E+00
11	GO:0034263: positive regulation of autophagy in response to ER overload	0.00E+00
12	GO:0052573: UDP-D-galactose metabolic process	0.00E+00
13	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
14	GO:2001142: nicotinate transport	0.00E+00
15	GO:0002764: immune response-regulating signaling pathway	0.00E+00
16	GO:0080050: regulation of seed development	0.00E+00
17	GO:0006468: protein phosphorylation	2.42E-12
18	GO:0010200: response to chitin	1.17E-07
19	GO:0046777: protein autophosphorylation	1.79E-06
20	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.47E-06
21	GO:0009626: plant-type hypersensitive response	3.40E-06
22	GO:0006955: immune response	3.99E-06
23	GO:0042742: defense response to bacterium	1.32E-05
24	GO:0048544: recognition of pollen	1.53E-05
25	GO:0071323: cellular response to chitin	2.72E-05
26	GO:0006904: vesicle docking involved in exocytosis	3.41E-05
27	GO:0010337: regulation of salicylic acid metabolic process	1.13E-04
28	GO:0006887: exocytosis	1.51E-04
29	GO:1900150: regulation of defense response to fungus	2.58E-04
30	GO:0007166: cell surface receptor signaling pathway	2.58E-04
31	GO:0030974: thiamine pyrophosphate transport	2.70E-04
32	GO:0080157: regulation of plant-type cell wall organization or biogenesis	2.70E-04
33	GO:0050691: regulation of defense response to virus by host	2.70E-04
34	GO:0032491: detection of molecule of fungal origin	2.70E-04
35	GO:0051180: vitamin transport	2.70E-04
36	GO:0071366: cellular response to indolebutyric acid stimulus	2.70E-04
37	GO:0015893: drug transport	5.94E-04
38	GO:0052542: defense response by callose deposition	5.94E-04
39	GO:2000071: regulation of defense response by callose deposition	5.94E-04
40	GO:0002221: pattern recognition receptor signaling pathway	5.94E-04
41	GO:0046740: transport of virus in host, cell to cell	5.94E-04
42	GO:0010155: regulation of proton transport	5.94E-04
43	GO:0042754: negative regulation of circadian rhythm	5.94E-04
44	GO:0010372: positive regulation of gibberellin biosynthetic process	5.94E-04
45	GO:2000030: regulation of response to red or far red light	5.94E-04
46	GO:0008219: cell death	7.22E-04
47	GO:0009817: defense response to fungus, incompatible interaction	7.22E-04
48	GO:0016045: detection of bacterium	9.62E-04
49	GO:0010359: regulation of anion channel activity	9.62E-04
50	GO:0010253: UDP-rhamnose biosynthetic process	9.62E-04
51	GO:0045793: positive regulation of cell size	9.62E-04
52	GO:0006011: UDP-glucose metabolic process	9.62E-04
53	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	9.62E-04
54	GO:0042344: indole glucosinolate catabolic process	9.62E-04
55	GO:0045087: innate immune response	9.69E-04
56	GO:0009611: response to wounding	9.88E-04
57	GO:0070588: calcium ion transmembrane transport	9.99E-04
58	GO:0046854: phosphatidylinositol phosphorylation	9.99E-04
59	GO:0009863: salicylic acid mediated signaling pathway	1.23E-03
60	GO:0015696: ammonium transport	1.38E-03
61	GO:0002679: respiratory burst involved in defense response	1.38E-03
62	GO:0006986: response to unfolded protein	1.38E-03
63	GO:0010071: root meristem specification	1.38E-03
64	GO:0034219: carbohydrate transmembrane transport	1.38E-03
65	GO:0030100: regulation of endocytosis	1.38E-03
66	GO:0009399: nitrogen fixation	1.38E-03
67	GO:0033014: tetrapyrrole biosynthetic process	1.38E-03
68	GO:0009226: nucleotide-sugar biosynthetic process	1.38E-03
69	GO:0006470: protein dephosphorylation	1.41E-03
70	GO:0031348: negative regulation of defense response	1.62E-03
71	GO:1902347: response to strigolactone	1.84E-03
72	GO:0080142: regulation of salicylic acid biosynthetic process	1.84E-03
73	GO:0009694: jasmonic acid metabolic process	1.84E-03
74	GO:0072488: ammonium transmembrane transport	1.84E-03
75	GO:0006536: glutamate metabolic process	1.84E-03
76	GO:0033356: UDP-L-arabinose metabolic process	1.84E-03
77	GO:0071219: cellular response to molecule of bacterial origin	1.84E-03
78	GO:0006817: phosphate ion transport	1.92E-03
79	GO:0009823: cytokinin catabolic process	2.35E-03
80	GO:0045038: protein import into chloroplast thylakoid membrane	2.35E-03
81	GO:0009164: nucleoside catabolic process	2.35E-03
82	GO:0045489: pectin biosynthetic process	2.42E-03
83	GO:0015691: cadmium ion transport	2.90E-03
84	GO:0006751: glutathione catabolic process	2.90E-03
85	GO:0010256: endomembrane system organization	2.90E-03
86	GO:0010193: response to ozone	2.98E-03
87	GO:0006952: defense response	3.14E-03
88	GO:0009742: brassinosteroid mediated signaling pathway	3.26E-03
89	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.26E-03
90	GO:0080113: regulation of seed growth	3.49E-03
91	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.49E-03
92	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.12E-03
93	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	4.12E-03
94	GO:0009845: seed germination	4.46E-03
95	GO:0006491: N-glycan processing	4.77E-03
96	GO:0009690: cytokinin metabolic process	4.77E-03
97	GO:0010078: maintenance of root meristem identity	4.77E-03
98	GO:0045010: actin nucleation	4.77E-03
99	GO:0048658: anther wall tapetum development	4.77E-03
100	GO:0010492: maintenance of shoot apical meristem identity	4.77E-03
101	GO:0006402: mRNA catabolic process	4.77E-03
102	GO:0009627: systemic acquired resistance	4.80E-03
103	GO:0006997: nucleus organization	5.47E-03
104	GO:0010204: defense response signaling pathway, resistance gene-independent	5.47E-03
105	GO:0030968: endoplasmic reticulum unfolded protein response	5.47E-03
106	GO:0009699: phenylpropanoid biosynthetic process	5.47E-03
107	GO:0009932: cell tip growth	5.47E-03
108	GO:0060321: acceptance of pollen	5.47E-03
109	GO:0007165: signal transduction	5.62E-03
110	GO:0009737: response to abscisic acid	5.90E-03
111	GO:0006783: heme biosynthetic process	6.20E-03
112	GO:0098656: anion transmembrane transport	6.20E-03
113	GO:0051865: protein autoubiquitination	6.20E-03
114	GO:0008202: steroid metabolic process	6.96E-03
115	GO:0006779: porphyrin-containing compound biosynthetic process	6.96E-03
116	GO:0016051: carbohydrate biosynthetic process	7.11E-03
117	GO:0010468: regulation of gene expression	7.61E-03
118	GO:0019538: protein metabolic process	7.75E-03
119	GO:0048829: root cap development	7.75E-03
120	GO:0010192: mucilage biosynthetic process	7.75E-03
121	GO:0006782: protoporphyrinogen IX biosynthetic process	7.75E-03
122	GO:0007064: mitotic sister chromatid cohesion	7.75E-03
123	GO:0016310: phosphorylation	7.99E-03
124	GO:0052544: defense response by callose deposition in cell wall	8.58E-03
125	GO:0046686: response to cadmium ion	9.08E-03
126	GO:0071365: cellular response to auxin stimulus	9.44E-03
127	GO:0055046: microgametogenesis	1.03E-02
128	GO:0031347: regulation of defense response	1.11E-02
129	GO:0034605: cellular response to heat	1.12E-02
130	GO:0002237: response to molecule of bacterial origin	1.12E-02
131	GO:0071732: cellular response to nitric oxide	1.22E-02
132	GO:0009969: xyloglucan biosynthetic process	1.22E-02
133	GO:0080188: RNA-directed DNA methylation	1.22E-02
134	GO:0048366: leaf development	1.31E-02
135	GO:0009555: pollen development	1.34E-02
136	GO:2000377: regulation of reactive oxygen species metabolic process	1.42E-02
137	GO:0006487: protein N-linked glycosylation	1.42E-02
138	GO:0035556: intracellular signal transduction	1.45E-02
139	GO:0016998: cell wall macromolecule catabolic process	1.62E-02
140	GO:0035428: hexose transmembrane transport	1.73E-02
141	GO:0030433: ubiquitin-dependent ERAD pathway	1.73E-02
142	GO:0030245: cellulose catabolic process	1.73E-02
143	GO:0010017: red or far-red light signaling pathway	1.73E-02
144	GO:0009814: defense response, incompatible interaction	1.73E-02
145	GO:0009624: response to nematode	1.77E-02
146	GO:0071369: cellular response to ethylene stimulus	1.84E-02
147	GO:0071215: cellular response to abscisic acid stimulus	1.84E-02
148	GO:0009686: gibberellin biosynthetic process	1.84E-02
149	GO:0009306: protein secretion	1.95E-02
150	GO:0010089: xylem development	1.95E-02
151	GO:0010214: seed coat development	1.95E-02
152	GO:0042147: retrograde transport, endosome to Golgi	2.07E-02
153	GO:0000271: polysaccharide biosynthetic process	2.19E-02
154	GO:0080022: primary root development	2.19E-02
155	GO:0042631: cellular response to water deprivation	2.19E-02
156	GO:0046323: glucose import	2.31E-02
157	GO:0009960: endosperm development	2.31E-02
158	GO:0006397: mRNA processing	2.41E-02
159	GO:0002229: defense response to oomycetes	2.68E-02
160	GO:0031047: gene silencing by RNA	2.81E-02
161	GO:0071281: cellular response to iron ion	2.94E-02
162	GO:0010090: trichome morphogenesis	2.94E-02
163	GO:1901657: glycosyl compound metabolic process	2.94E-02
164	GO:0007623: circadian rhythm	3.06E-02
165	GO:0006914: autophagy	3.07E-02
166	GO:0001666: response to hypoxia	3.48E-02
167	GO:0009615: response to virus	3.48E-02
168	GO:0009816: defense response to bacterium, incompatible interaction	3.63E-02
169	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.63E-02
170	GO:0009617: response to bacterium	3.65E-02
171	GO:0006979: response to oxidative stress	3.85E-02
172	GO:0048573: photoperiodism, flowering	3.91E-02
173	GO:0015995: chlorophyll biosynthetic process	3.91E-02
174	GO:0016049: cell growth	4.06E-02
175	GO:0010311: lateral root formation	4.36E-02
176	GO:0009813: flavonoid biosynthetic process	4.36E-02
177	GO:0006811: ion transport	4.51E-02
178	GO:0006499: N-terminal protein myristoylation	4.51E-02
179	GO:0010119: regulation of stomatal movement	4.66E-02
180	GO:0009637: response to blue light	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity	0.00E+00
2	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
3	GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity	0.00E+00
4	GO:2001080: chitosan binding	0.00E+00
5	GO:0047350: glucuronate-1-phosphate uridylyltransferase activity	0.00E+00
6	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
7	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
8	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
9	GO:0090416: nicotinate transporter activity	0.00E+00
10	GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity	0.00E+00
11	GO:0070566: adenylyltransferase activity	0.00E+00
12	GO:0005522: profilin binding	0.00E+00
13	GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity	0.00E+00
14	GO:0016301: kinase activity	2.22E-14
15	GO:0005524: ATP binding	3.06E-13
16	GO:0004674: protein serine/threonine kinase activity	7.30E-10
17	GO:0004672: protein kinase activity	2.71E-08
18	GO:0019199: transmembrane receptor protein kinase activity	4.90E-05
19	GO:0047631: ADP-ribose diphosphatase activity	7.79E-05
20	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.73E-04
21	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	2.70E-04
22	GO:0090422: thiamine pyrophosphate transporter activity	2.70E-04
23	GO:0015085: calcium ion transmembrane transporter activity	2.70E-04
24	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	2.70E-04
25	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.70E-04
26	GO:0050377: UDP-glucose 4,6-dehydratase activity	5.94E-04
27	GO:0004103: choline kinase activity	5.94E-04
28	GO:0008883: glutamyl-tRNA reductase activity	5.94E-04
29	GO:0008460: dTDP-glucose 4,6-dehydratase activity	5.94E-04
30	GO:0010280: UDP-L-rhamnose synthase activity	5.94E-04
31	GO:1990585: hydroxyproline O-arabinosyltransferase activity	5.94E-04
32	GO:0019888: protein phosphatase regulator activity	7.96E-04
33	GO:0005388: calcium-transporting ATPase activity	7.96E-04
34	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	8.65E-04
35	GO:0003840: gamma-glutamyltransferase activity	9.62E-04
36	GO:0036374: glutathione hydrolase activity	9.62E-04
37	GO:0004383: guanylate cyclase activity	9.62E-04
38	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	9.62E-04
39	GO:0004722: protein serine/threonine phosphatase activity	1.08E-03
40	GO:0015086: cadmium ion transmembrane transporter activity	1.38E-03
41	GO:0004351: glutamate decarboxylase activity	1.38E-03
42	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	1.38E-03
43	GO:0001653: peptide receptor activity	1.38E-03
44	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.38E-03
45	GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity	1.38E-03
46	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.38E-03
47	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.62E-03
48	GO:0030246: carbohydrate binding	1.70E-03
49	GO:0043015: gamma-tubulin binding	1.84E-03
50	GO:0008514: organic anion transmembrane transporter activity	1.92E-03
51	GO:0005516: calmodulin binding	2.12E-03
52	GO:0031625: ubiquitin protein ligase binding	2.20E-03
53	GO:0018685: alkane 1-monooxygenase activity	2.35E-03
54	GO:0002020: protease binding	2.35E-03
55	GO:0004356: glutamate-ammonia ligase activity	2.35E-03
56	GO:0045431: flavonol synthase activity	2.35E-03
57	GO:0019139: cytokinin dehydrogenase activity	2.35E-03
58	GO:0000210: NAD+ diphosphatase activity	2.90E-03
59	GO:0035673: oligopeptide transmembrane transporter activity	2.90E-03
60	GO:0008519: ammonium transmembrane transporter activity	2.90E-03
61	GO:0004709: MAP kinase kinase kinase activity	2.90E-03
62	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.49E-03
63	GO:0004559: alpha-mannosidase activity	3.49E-03
64	GO:0051020: GTPase binding	3.49E-03
65	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	3.49E-03
66	GO:0019899: enzyme binding	4.12E-03
67	GO:0008143: poly(A) binding	4.12E-03
68	GO:0004143: diacylglycerol kinase activity	4.12E-03
69	GO:0016621: cinnamoyl-CoA reductase activity	4.12E-03
70	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.77E-03
71	GO:0015144: carbohydrate transmembrane transporter activity	5.07E-03
72	GO:0004430: 1-phosphatidylinositol 4-kinase activity	5.47E-03
73	GO:0003951: NAD+ kinase activity	5.47E-03
74	GO:0008142: oxysterol binding	5.47E-03
75	GO:0005351: sugar:proton symporter activity	5.90E-03
76	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	7.75E-03
77	GO:0003729: mRNA binding	8.31E-03
78	GO:0015198: oligopeptide transporter activity	9.44E-03
79	GO:0004521: endoribonuclease activity	9.44E-03
80	GO:0035091: phosphatidylinositol binding	9.94E-03
81	GO:0005315: inorganic phosphate transmembrane transporter activity	1.03E-02
82	GO:0046982: protein heterodimerization activity	1.04E-02
83	GO:0008131: primary amine oxidase activity	1.12E-02
84	GO:0051119: sugar transmembrane transporter activity	1.22E-02
85	GO:0008061: chitin binding	1.22E-02
86	GO:0050660: flavin adenine dinucleotide binding	1.28E-02
87	GO:0033612: receptor serine/threonine kinase binding	1.62E-02
88	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.62E-02
89	GO:0004540: ribonuclease activity	1.62E-02
90	GO:0003779: actin binding	1.72E-02
91	GO:0022891: substrate-specific transmembrane transporter activity	1.84E-02
92	GO:0016758: transferase activity, transferring hexosyl groups	2.16E-02
93	GO:0050662: coenzyme binding	2.43E-02
94	GO:0005355: glucose transmembrane transporter activity	2.43E-02
95	GO:0009055: electron carrier activity	2.49E-02
96	GO:0004518: nuclease activity	2.81E-02
97	GO:0051015: actin filament binding	2.94E-02
98	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.21E-02
99	GO:0005509: calcium ion binding	3.38E-02
100	GO:0005515: protein binding	3.77E-02
101	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.77E-02
102	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.88E-02
103	GO:0030247: polysaccharide binding	3.91E-02
104	GO:0004683: calmodulin-dependent protein kinase activity	3.91E-02
105	GO:0102483: scopolin beta-glucosidase activity	3.91E-02
106	GO:0003682: chromatin binding	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0045335: phagocytic vesicle	0.00E+00
2	GO:0005886: plasma membrane	1.12E-17
3	GO:0000145: exocyst	8.40E-07
4	GO:0016021: integral component of membrane	8.12E-06
5	GO:0005768: endosome	8.52E-06
6	GO:0070062: extracellular exosome	2.72E-05
7	GO:0010008: endosome membrane	4.46E-05
8	GO:0005802: trans-Golgi network	1.71E-04
9	GO:0005911: cell-cell junction	2.70E-04
10	GO:0016442: RISC complex	2.70E-04
11	GO:0010494: cytoplasmic stress granule	3.84E-04
12	GO:0080085: signal recognition particle, chloroplast targeting	5.94E-04
13	GO:0000159: protein phosphatase type 2A complex	6.14E-04
14	GO:0019897: extrinsic component of plasma membrane	9.62E-04
15	GO:0005794: Golgi apparatus	1.76E-03
16	GO:0005829: cytosol	2.77E-03
17	GO:0012505: endomembrane system	2.92E-03
18	GO:0009506: plasmodesma	3.10E-03
19	GO:0030173: integral component of Golgi membrane	3.49E-03
20	GO:0016363: nuclear matrix	3.49E-03
21	GO:0005783: endoplasmic reticulum	5.86E-03
22	GO:0000139: Golgi membrane	6.91E-03
23	GO:0015030: Cajal body	6.96E-03
24	GO:0048471: perinuclear region of cytoplasm	8.58E-03
25	GO:0090406: pollen tube	9.18E-03
26	GO:0043234: protein complex	1.32E-02
27	GO:0005635: nuclear envelope	1.33E-02
28	GO:0030136: clathrin-coated vesicle	2.07E-02
29	GO:0032580: Golgi cisterna membrane	3.07E-02
30	GO:0005887: integral component of plasma membrane	3.34E-02
31	GO:0000932: P-body	3.48E-02
32	GO:0000786: nucleosome	4.82E-02