GO Enrichment Analysis of Co-expressed Genes with
AT5G04260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090239: regulation of histone H4 acetylation | 0.00E+00 |
| 2 | GO:0001881: receptor recycling | 0.00E+00 |
| 3 | GO:0046487: glyoxylate metabolic process | 0.00E+00 |
| 4 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.54E-15 |
| 5 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.88E-09 |
| 6 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 5.43E-06 |
| 7 | GO:0043248: proteasome assembly | 8.37E-06 |
| 8 | GO:0032365: intracellular lipid transport | 5.48E-05 |
| 9 | GO:0006212: uracil catabolic process | 1.34E-04 |
| 10 | GO:0051788: response to misfolded protein | 1.34E-04 |
| 11 | GO:0019483: beta-alanine biosynthetic process | 1.34E-04 |
| 12 | GO:0043981: histone H4-K5 acetylation | 1.34E-04 |
| 13 | GO:0008333: endosome to lysosome transport | 2.28E-04 |
| 14 | GO:0009647: skotomorphogenesis | 3.33E-04 |
| 15 | GO:0001676: long-chain fatty acid metabolic process | 3.33E-04 |
| 16 | GO:0046836: glycolipid transport | 3.33E-04 |
| 17 | GO:0030163: protein catabolic process | 4.10E-04 |
| 18 | GO:0006914: autophagy | 4.36E-04 |
| 19 | GO:0010363: regulation of plant-type hypersensitive response | 4.45E-04 |
| 20 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.47E-04 |
| 21 | GO:0010043: response to zinc ion | 7.69E-04 |
| 22 | GO:1901001: negative regulation of response to salt stress | 8.25E-04 |
| 23 | GO:0009554: megasporogenesis | 8.25E-04 |
| 24 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 9.62E-04 |
| 25 | GO:0048528: post-embryonic root development | 9.62E-04 |
| 26 | GO:0006506: GPI anchor biosynthetic process | 1.11E-03 |
| 27 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.11E-03 |
| 28 | GO:0043562: cellular response to nitrogen levels | 1.26E-03 |
| 29 | GO:0022900: electron transport chain | 1.26E-03 |
| 30 | GO:0098656: anion transmembrane transport | 1.41E-03 |
| 31 | GO:0046685: response to arsenic-containing substance | 1.41E-03 |
| 32 | GO:0010449: root meristem growth | 1.58E-03 |
| 33 | GO:0048229: gametophyte development | 1.93E-03 |
| 34 | GO:0006820: anion transport | 2.11E-03 |
| 35 | GO:0006807: nitrogen compound metabolic process | 2.30E-03 |
| 36 | GO:0006626: protein targeting to mitochondrion | 2.30E-03 |
| 37 | GO:2000028: regulation of photoperiodism, flowering | 2.30E-03 |
| 38 | GO:0007034: vacuolar transport | 2.49E-03 |
| 39 | GO:0046686: response to cadmium ion | 2.70E-03 |
| 40 | GO:0006406: mRNA export from nucleus | 3.11E-03 |
| 41 | GO:0006289: nucleotide-excision repair | 3.11E-03 |
| 42 | GO:0061077: chaperone-mediated protein folding | 3.54E-03 |
| 43 | GO:0016226: iron-sulfur cluster assembly | 3.77E-03 |
| 44 | GO:0007005: mitochondrion organization | 3.77E-03 |
| 45 | GO:0042147: retrograde transport, endosome to Golgi | 4.47E-03 |
| 46 | GO:0006623: protein targeting to vacuole | 5.48E-03 |
| 47 | GO:0010183: pollen tube guidance | 5.48E-03 |
| 48 | GO:0048825: cotyledon development | 5.48E-03 |
| 49 | GO:0009556: microsporogenesis | 5.48E-03 |
| 50 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 5.74E-03 |
| 51 | GO:0010193: response to ozone | 5.74E-03 |
| 52 | GO:0006635: fatty acid beta-oxidation | 5.74E-03 |
| 53 | GO:0016049: cell growth | 8.60E-03 |
| 54 | GO:0009817: defense response to fungus, incompatible interaction | 8.91E-03 |
| 55 | GO:0015031: protein transport | 9.66E-03 |
| 56 | GO:0009631: cold acclimation | 9.86E-03 |
| 57 | GO:0000724: double-strand break repair via homologous recombination | 1.02E-02 |
| 58 | GO:0006631: fatty acid metabolic process | 1.19E-02 |
| 59 | GO:0008283: cell proliferation | 1.26E-02 |
| 60 | GO:0009846: pollen germination | 1.48E-02 |
| 61 | GO:0009908: flower development | 1.55E-02 |
| 62 | GO:0009736: cytokinin-activated signaling pathway | 1.55E-02 |
| 63 | GO:0009735: response to cytokinin | 1.57E-02 |
| 64 | GO:0009553: embryo sac development | 1.95E-02 |
| 65 | GO:0009793: embryo development ending in seed dormancy | 2.06E-02 |
| 66 | GO:0000398: mRNA splicing, via spliceosome | 2.21E-02 |
| 67 | GO:0009845: seed germination | 2.47E-02 |
| 68 | GO:0006413: translational initiation | 2.80E-02 |
| 69 | GO:0009651: response to salt stress | 3.28E-02 |
| 70 | GO:0009617: response to bacterium | 3.34E-02 |
| 71 | GO:0006970: response to osmotic stress | 4.23E-02 |
| 72 | GO:0009860: pollen tube growth | 4.23E-02 |
| 73 | GO:0048366: leaf development | 4.51E-02 |
| 74 | GO:0016192: vesicle-mediated transport | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 2 | GO:0004298: threonine-type endopeptidase activity | 3.81E-28 |
| 3 | GO:0008233: peptidase activity | 2.39E-17 |
| 4 | GO:0019786: Atg8-specific protease activity | 5.48E-05 |
| 5 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 5.48E-05 |
| 6 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 5.48E-05 |
| 7 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 5.48E-05 |
| 8 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 5.48E-05 |
| 9 | GO:0032934: sterol binding | 1.34E-04 |
| 10 | GO:0019779: Atg8 activating enzyme activity | 1.34E-04 |
| 11 | GO:1990585: hydroxyproline O-arabinosyltransferase activity | 1.34E-04 |
| 12 | GO:0017089: glycolipid transporter activity | 3.33E-04 |
| 13 | GO:0070628: proteasome binding | 4.45E-04 |
| 14 | GO:0019776: Atg8 ligase activity | 4.45E-04 |
| 15 | GO:0051861: glycolipid binding | 4.45E-04 |
| 16 | GO:0008198: ferrous iron binding | 5.66E-04 |
| 17 | GO:0031593: polyubiquitin binding | 6.92E-04 |
| 18 | GO:0102391: decanoate--CoA ligase activity | 8.25E-04 |
| 19 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 9.62E-04 |
| 20 | GO:0004467: long-chain fatty acid-CoA ligase activity | 9.62E-04 |
| 21 | GO:0015288: porin activity | 1.11E-03 |
| 22 | GO:0005198: structural molecule activity | 1.19E-03 |
| 23 | GO:0008308: voltage-gated anion channel activity | 1.26E-03 |
| 24 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.93E-03 |
| 25 | GO:0008327: methyl-CpG binding | 1.93E-03 |
| 26 | GO:0004175: endopeptidase activity | 2.49E-03 |
| 27 | GO:0005528: FK506 binding | 3.11E-03 |
| 28 | GO:0043130: ubiquitin binding | 3.11E-03 |
| 29 | GO:0004540: ribonuclease activity | 3.54E-03 |
| 30 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 5.74E-03 |
| 31 | GO:0003684: damaged DNA binding | 6.55E-03 |
| 32 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.91E-03 |
| 33 | GO:0050897: cobalt ion binding | 9.86E-03 |
| 34 | GO:0003746: translation elongation factor activity | 1.05E-02 |
| 35 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.33E-02 |
| 36 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.40E-02 |
| 37 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.55E-02 |
| 38 | GO:0015035: protein disulfide oxidoreductase activity | 2.04E-02 |
| 39 | GO:0005515: protein binding | 2.19E-02 |
| 40 | GO:0008017: microtubule binding | 3.04E-02 |
| 41 | GO:0003743: translation initiation factor activity | 3.29E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 1.18E-30 |
| 2 | GO:0005839: proteasome core complex | 3.81E-28 |
| 3 | GO:0019773: proteasome core complex, alpha-subunit complex | 2.81E-15 |
| 4 | GO:0005829: cytosol | 4.58E-07 |
| 5 | GO:0000421: autophagosome membrane | 2.21E-05 |
| 6 | GO:0022626: cytosolic ribosome | 5.29E-05 |
| 7 | GO:0008541: proteasome regulatory particle, lid subcomplex | 6.26E-05 |
| 8 | GO:0031410: cytoplasmic vesicle | 1.91E-04 |
| 9 | GO:0046861: glyoxysomal membrane | 2.28E-04 |
| 10 | GO:0005634: nucleus | 2.82E-04 |
| 11 | GO:1990726: Lsm1-7-Pat1 complex | 3.33E-04 |
| 12 | GO:0005775: vacuolar lumen | 3.33E-04 |
| 13 | GO:0005776: autophagosome | 4.45E-04 |
| 14 | GO:0005774: vacuolar membrane | 5.47E-04 |
| 15 | GO:0005771: multivesicular body | 6.92E-04 |
| 16 | GO:0030904: retromer complex | 6.92E-04 |
| 17 | GO:0005801: cis-Golgi network | 8.25E-04 |
| 18 | GO:0005688: U6 snRNP | 1.11E-03 |
| 19 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 1.26E-03 |
| 20 | GO:0046930: pore complex | 1.26E-03 |
| 21 | GO:0009514: glyoxysome | 1.26E-03 |
| 22 | GO:0005773: vacuole | 1.27E-03 |
| 23 | GO:0071011: precatalytic spliceosome | 1.58E-03 |
| 24 | GO:0071013: catalytic step 2 spliceosome | 1.93E-03 |
| 25 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.11E-03 |
| 26 | GO:0005737: cytoplasm | 2.16E-03 |
| 27 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.18E-03 |
| 28 | GO:0005750: mitochondrial respiratory chain complex III | 2.49E-03 |
| 29 | GO:0000419: DNA-directed RNA polymerase V complex | 2.90E-03 |
| 30 | GO:0005769: early endosome | 2.90E-03 |
| 31 | GO:0005758: mitochondrial intermembrane space | 3.11E-03 |
| 32 | GO:0005741: mitochondrial outer membrane | 3.54E-03 |
| 33 | GO:0016592: mediator complex | 6.00E-03 |
| 34 | GO:0005874: microtubule | 6.32E-03 |
| 35 | GO:0000932: P-body | 7.40E-03 |
| 36 | GO:0009507: chloroplast | 7.63E-03 |
| 37 | GO:0005788: endoplasmic reticulum lumen | 7.69E-03 |
| 38 | GO:0015934: large ribosomal subunit | 9.86E-03 |
| 39 | GO:0005819: spindle | 1.12E-02 |
| 40 | GO:0031902: late endosome membrane | 1.19E-02 |
| 41 | GO:0090406: pollen tube | 1.26E-02 |
| 42 | GO:0005747: mitochondrial respiratory chain complex I | 1.79E-02 |
| 43 | GO:0005777: peroxisome | 1.97E-02 |
| 44 | GO:0009524: phragmoplast | 2.43E-02 |
| 45 | GO:0005783: endoplasmic reticulum | 2.59E-02 |
| 46 | GO:0005759: mitochondrial matrix | 2.75E-02 |
| 47 | GO:0005802: trans-Golgi network | 2.76E-02 |
| 48 | GO:0009705: plant-type vacuole membrane | 2.94E-02 |
| 49 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.29E-02 |