Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G04250

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1902039: negative regulation of seed dormancy process1.30E-05
2GO:0048838: release of seed from dormancy3.42E-05
3GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process6.16E-05
4GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.39E-05
5GO:0009939: positive regulation of gibberellic acid mediated signaling pathway1.30E-04
6GO:0009247: glycolipid biosynthetic process1.68E-04
7GO:1900057: positive regulation of leaf senescence2.99E-04
8GO:0019375: galactolipid biosynthetic process3.46E-04
9GO:0045893: positive regulation of transcription, DNA-templated3.51E-04
10GO:0048193: Golgi vesicle transport3.94E-04
11GO:0010112: regulation of systemic acquired resistance4.45E-04
12GO:0009835: fruit ripening4.45E-04
13GO:0009790: embryo development5.10E-04
14GO:0006470: protein dephosphorylation6.80E-04
15GO:0010030: positive regulation of seed germination8.32E-04
16GO:0046854: phosphatidylinositol phosphorylation8.32E-04
17GO:0010167: response to nitrate8.32E-04
18GO:0046777: protein autophosphorylation1.18E-03
19GO:0009693: ethylene biosynthetic process1.21E-03
20GO:0009749: response to glucose1.63E-03
21GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.70E-03
22GO:0071281: cellular response to iron ion1.86E-03
23GO:0071805: potassium ion transmembrane transport2.02E-03
24GO:0010027: thylakoid membrane organization2.18E-03
25GO:0010029: regulation of seed germination2.26E-03
26GO:0010119: regulation of stomatal movement2.87E-03
27GO:0051707: response to other organism3.63E-03
28GO:0009414: response to water deprivation5.54E-03
29GO:0006396: RNA processing5.77E-03
30GO:0000398: mRNA splicing, via spliceosome6.24E-03
31GO:0007623: circadian rhythm8.26E-03
32GO:0006468: protein phosphorylation9.35E-03
33GO:0007275: multicellular organism development1.12E-02
34GO:0009658: chloroplast organization1.12E-02
35GO:0007165: signal transduction1.18E-02
36GO:0009737: response to abscisic acid1.21E-02
37GO:0048364: root development1.77E-02
38GO:0008152: metabolic process1.85E-02
39GO:0009738: abscisic acid-activated signaling pathway2.53E-02
40GO:0035556: intracellular signal transduction2.69E-02
41GO:0009733: response to auxin4.65E-02
RankGO TermAdjusted P value
1GO:0008419: RNA lariat debranching enzyme activity0.00E+00
2GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity3.42E-05
3GO:0016307: phosphatidylinositol phosphate kinase activity3.42E-05
4GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity6.90E-05
5GO:0035250: UDP-galactosyltransferase activity9.36E-05
6GO:0010178: IAA-amino acid conjugate hydrolase activity9.36E-05
7GO:0004722: protein serine/threonine phosphatase activity1.13E-04
8GO:0003785: actin monomer binding1.68E-04
9GO:0004564: beta-fructofuranosidase activity3.46E-04
10GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity3.46E-04
11GO:0005267: potassium channel activity3.94E-04
12GO:0004575: sucrose alpha-glucosidase activity4.96E-04
13GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity5.49E-04
14GO:0004672: protein kinase activity1.15E-03
15GO:0004872: receptor activity1.63E-03
16GO:0051015: actin filament binding1.86E-03
17GO:0005524: ATP binding2.00E-03
18GO:0008237: metallopeptidase activity2.02E-03
19GO:0004721: phosphoprotein phosphatase activity2.43E-03
20GO:0004004: ATP-dependent RNA helicase activity2.43E-03
21GO:0004712: protein serine/threonine/tyrosine kinase activity3.24E-03
22GO:0004386: helicase activity6.01E-03
23GO:0030170: pyridoxal phosphate binding7.10E-03
24GO:0008194: UDP-glycosyltransferase activity8.93E-03
25GO:0042802: identical protein binding9.77E-03
26GO:0004871: signal transducer activity1.53E-02
27GO:0016757: transferase activity, transferring glycosyl groups1.94E-02
28GO:0016301: kinase activity2.50E-02
29GO:0004674: protein serine/threonine kinase activity2.81E-02
30GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.16E-02
RankGO TermAdjusted P value
1GO:0005788: endoplasmic reticulum lumen2.26E-03
2GO:0031225: anchored component of membrane4.38E-03
3GO:0009706: chloroplast inner membrane5.66E-03
4GO:0005874: microtubule1.27E-02
5GO:0005737: cytoplasm4.59E-02
6GO:0009536: plastid4.95E-02
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Gene type



Gene DE type