GO Enrichment Analysis of Co-expressed Genes with
AT5G03900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005997: xylulose metabolic process | 0.00E+00 |
| 2 | GO:0080005: photosystem stoichiometry adjustment | 1.69E-08 |
| 3 | GO:0071461: cellular response to redox state | 1.39E-05 |
| 4 | GO:0010362: negative regulation of anion channel activity by blue light | 1.39E-05 |
| 5 | GO:0010343: singlet oxygen-mediated programmed cell death | 3.65E-05 |
| 6 | GO:0016117: carotenoid biosynthetic process | 3.68E-05 |
| 7 | GO:0006696: ergosterol biosynthetic process | 6.55E-05 |
| 8 | GO:0006013: mannose metabolic process | 6.55E-05 |
| 9 | GO:2001141: regulation of RNA biosynthetic process | 9.94E-05 |
| 10 | GO:0009902: chloroplast relocation | 1.37E-04 |
| 11 | GO:0009765: photosynthesis, light harvesting | 1.37E-04 |
| 12 | GO:0006552: leucine catabolic process | 1.37E-04 |
| 13 | GO:0000304: response to singlet oxygen | 1.78E-04 |
| 14 | GO:0016123: xanthophyll biosynthetic process | 1.78E-04 |
| 15 | GO:0016120: carotene biosynthetic process | 1.78E-04 |
| 16 | GO:0010190: cytochrome b6f complex assembly | 2.22E-04 |
| 17 | GO:0071482: cellular response to light stimulus | 4.16E-04 |
| 18 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 4.68E-04 |
| 19 | GO:0009638: phototropism | 5.23E-04 |
| 20 | GO:0045036: protein targeting to chloroplast | 5.78E-04 |
| 21 | GO:0006352: DNA-templated transcription, initiation | 6.34E-04 |
| 22 | GO:0010207: photosystem II assembly | 8.13E-04 |
| 23 | GO:0006366: transcription from RNA polymerase II promoter | 1.13E-03 |
| 24 | GO:0016226: iron-sulfur cluster assembly | 1.20E-03 |
| 25 | GO:0046777: protein autophosphorylation | 1.28E-03 |
| 26 | GO:0010118: stomatal movement | 1.49E-03 |
| 27 | GO:0042335: cuticle development | 1.49E-03 |
| 28 | GO:0009791: post-embryonic development | 1.72E-03 |
| 29 | GO:0009816: defense response to bacterium, incompatible interaction | 2.39E-03 |
| 30 | GO:0018298: protein-chromophore linkage | 2.75E-03 |
| 31 | GO:0000160: phosphorelay signal transduction system | 2.84E-03 |
| 32 | GO:0009637: response to blue light | 3.22E-03 |
| 33 | GO:0007623: circadian rhythm | 8.74E-03 |
| 34 | GO:0010228: vegetative to reproductive phase transition of meristem | 9.02E-03 |
| 35 | GO:0010468: regulation of gene expression | 9.90E-03 |
| 36 | GO:0016310: phosphorylation | 1.52E-02 |
| 37 | GO:0055114: oxidation-reduction process | 1.68E-02 |
| 38 | GO:0006508: proteolysis | 1.90E-02 |
| 39 | GO:0009735: response to cytokinin | 2.57E-02 |
| 40 | GO:0035556: intracellular signal transduction | 2.85E-02 |
| 41 | GO:0006457: protein folding | 3.30E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 2 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 3 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 4 | GO:0004856: xylulokinase activity | 1.39E-05 |
| 5 | GO:0030941: chloroplast targeting sequence binding | 1.39E-05 |
| 6 | GO:0004485: methylcrotonoyl-CoA carboxylase activity | 1.39E-05 |
| 7 | GO:0051996: squalene synthase activity | 1.39E-05 |
| 8 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 3.65E-05 |
| 9 | GO:0004047: aminomethyltransferase activity | 3.65E-05 |
| 10 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 6.55E-05 |
| 11 | GO:0004075: biotin carboxylase activity | 6.55E-05 |
| 12 | GO:0004180: carboxypeptidase activity | 6.55E-05 |
| 13 | GO:0009882: blue light photoreceptor activity | 9.94E-05 |
| 14 | GO:0001053: plastid sigma factor activity | 1.37E-04 |
| 15 | GO:0051861: glycolipid binding | 1.37E-04 |
| 16 | GO:0016987: sigma factor activity | 1.37E-04 |
| 17 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.78E-04 |
| 18 | GO:0004559: alpha-mannosidase activity | 2.68E-04 |
| 19 | GO:0071949: FAD binding | 4.68E-04 |
| 20 | GO:0000155: phosphorelay sensor kinase activity | 7.52E-04 |
| 21 | GO:0001046: core promoter sequence-specific DNA binding | 1.00E-03 |
| 22 | GO:0010181: FMN binding | 1.64E-03 |
| 23 | GO:0048038: quinone binding | 1.80E-03 |
| 24 | GO:0004518: nuclease activity | 1.88E-03 |
| 25 | GO:0008236: serine-type peptidase activity | 2.66E-03 |
| 26 | GO:0050897: cobalt ion binding | 3.03E-03 |
| 27 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.03E-03 |
| 28 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.69E-03 |
| 29 | GO:0016301: kinase activity | 6.79E-03 |
| 30 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 7.11E-03 |
| 31 | GO:0016491: oxidoreductase activity | 8.11E-03 |
| 32 | GO:0042802: identical protein binding | 1.03E-02 |
| 33 | GO:0008233: peptidase activity | 1.37E-02 |
| 34 | GO:0016740: transferase activity | 3.16E-02 |
| 35 | GO:0030246: carbohydrate binding | 3.39E-02 |
| 36 | GO:0005515: protein binding | 4.11E-02 |
| 37 | GO:0003824: catalytic activity | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.41E-07 |
| 2 | GO:0031969: chloroplast membrane | 8.58E-05 |
| 3 | GO:0031359: integral component of chloroplast outer membrane | 3.15E-04 |
| 4 | GO:0042651: thylakoid membrane | 1.07E-03 |
| 5 | GO:0009707: chloroplast outer membrane | 2.75E-03 |
| 6 | GO:0010287: plastoglobule | 6.73E-03 |
| 7 | GO:0009536: plastid | 7.55E-03 |
| 8 | GO:0005759: mitochondrial matrix | 8.19E-03 |
| 9 | GO:0009535: chloroplast thylakoid membrane | 1.38E-02 |
| 10 | GO:0005773: vacuole | 3.29E-02 |