GO Enrichment Analysis of Co-expressed Genes with
AT5G03300
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 2 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 3 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 4 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 5 | GO:0051050: positive regulation of transport | 0.00E+00 |
| 6 | GO:0006412: translation | 3.83E-11 |
| 7 | GO:0006364: rRNA processing | 4.58E-10 |
| 8 | GO:0010162: seed dormancy process | 2.40E-07 |
| 9 | GO:0031120: snRNA pseudouridine synthesis | 4.04E-05 |
| 10 | GO:0031118: rRNA pseudouridine synthesis | 4.04E-05 |
| 11 | GO:0000494: box C/D snoRNA 3'-end processing | 4.04E-05 |
| 12 | GO:1990258: histone glutamine methylation | 4.04E-05 |
| 13 | GO:0009944: polarity specification of adaxial/abaxial axis | 9.13E-05 |
| 14 | GO:0045041: protein import into mitochondrial intermembrane space | 1.00E-04 |
| 15 | GO:0009553: embryo sac development | 1.02E-04 |
| 16 | GO:0007005: mitochondrion organization | 1.25E-04 |
| 17 | GO:0009294: DNA mediated transformation | 1.38E-04 |
| 18 | GO:0009735: response to cytokinin | 2.19E-04 |
| 19 | GO:0006986: response to unfolded protein | 2.55E-04 |
| 20 | GO:0051085: chaperone mediated protein folding requiring cofactor | 2.55E-04 |
| 21 | GO:0009855: determination of bilateral symmetry | 2.55E-04 |
| 22 | GO:0051131: chaperone-mediated protein complex assembly | 2.55E-04 |
| 23 | GO:0042273: ribosomal large subunit biogenesis | 3.43E-04 |
| 24 | GO:0042254: ribosome biogenesis | 4.18E-04 |
| 25 | GO:0031167: rRNA methylation | 4.37E-04 |
| 26 | GO:0006458: 'de novo' protein folding | 6.40E-04 |
| 27 | GO:0042026: protein refolding | 6.40E-04 |
| 28 | GO:0080186: developmental vegetative growth | 7.49E-04 |
| 29 | GO:0001558: regulation of cell growth | 9.77E-04 |
| 30 | GO:0001510: RNA methylation | 9.77E-04 |
| 31 | GO:0016569: covalent chromatin modification | 1.29E-03 |
| 32 | GO:0030422: production of siRNA involved in RNA interference | 1.35E-03 |
| 33 | GO:0046686: response to cadmium ion | 1.47E-03 |
| 34 | GO:0006108: malate metabolic process | 1.77E-03 |
| 35 | GO:0006413: translational initiation | 2.17E-03 |
| 36 | GO:0000027: ribosomal large subunit assembly | 2.39E-03 |
| 37 | GO:0006457: protein folding | 2.44E-03 |
| 38 | GO:0051302: regulation of cell division | 2.55E-03 |
| 39 | GO:0061077: chaperone-mediated protein folding | 2.72E-03 |
| 40 | GO:0008033: tRNA processing | 3.61E-03 |
| 41 | GO:0010197: polar nucleus fusion | 3.80E-03 |
| 42 | GO:0009960: endosperm development | 3.80E-03 |
| 43 | GO:0009408: response to heat | 6.50E-03 |
| 44 | GO:0016049: cell growth | 6.54E-03 |
| 45 | GO:0048527: lateral root development | 7.49E-03 |
| 46 | GO:0006099: tricarboxylic acid cycle | 8.24E-03 |
| 47 | GO:0000154: rRNA modification | 1.03E-02 |
| 48 | GO:0006414: translational elongation | 1.73E-02 |
| 49 | GO:0009723: response to ethylene | 3.37E-02 |
| 50 | GO:0045892: negative regulation of transcription, DNA-templated | 4.07E-02 |
| 51 | GO:0032259: methylation | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 9.81E-14 |
| 2 | GO:0003723: RNA binding | 8.66E-07 |
| 3 | GO:0004407: histone deacetylase activity | 1.21E-06 |
| 4 | GO:0019843: rRNA binding | 6.45E-06 |
| 5 | GO:0030515: snoRNA binding | 1.02E-05 |
| 6 | GO:0044183: protein binding involved in protein folding | 3.96E-05 |
| 7 | GO:0008746: NAD(P)+ transhydrogenase activity | 4.04E-05 |
| 8 | GO:1990259: histone-glutamine methyltransferase activity | 4.04E-05 |
| 9 | GO:0051082: unfolded protein binding | 1.06E-04 |
| 10 | GO:0008649: rRNA methyltransferase activity | 1.73E-04 |
| 11 | GO:0016615: malate dehydrogenase activity | 5.37E-04 |
| 12 | GO:0003746: translation elongation factor activity | 5.76E-04 |
| 13 | GO:0030060: L-malate dehydrogenase activity | 6.40E-04 |
| 14 | GO:0008235: metalloexopeptidase activity | 7.49E-04 |
| 15 | GO:0008135: translation factor activity, RNA binding | 9.77E-04 |
| 16 | GO:0009982: pseudouridine synthase activity | 1.77E-03 |
| 17 | GO:0000166: nucleotide binding | 1.77E-03 |
| 18 | GO:0051087: chaperone binding | 2.55E-03 |
| 19 | GO:0003743: translation initiation factor activity | 2.71E-03 |
| 20 | GO:0003924: GTPase activity | 6.50E-03 |
| 21 | GO:0050897: cobalt ion binding | 7.49E-03 |
| 22 | GO:0005507: copper ion binding | 1.65E-02 |
| 23 | GO:0005525: GTP binding | 1.91E-02 |
| 24 | GO:0008168: methyltransferase activity | 2.95E-02 |
| 25 | GO:0003729: mRNA binding | 3.49E-02 |
| 26 | GO:0016787: hydrolase activity | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005730: nucleolus | 3.74E-22 |
| 2 | GO:0005840: ribosome | 3.83E-08 |
| 3 | GO:0022626: cytosolic ribosome | 4.67E-08 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 7.89E-08 |
| 5 | GO:0032040: small-subunit processome | 4.12E-07 |
| 6 | GO:0022627: cytosolic small ribosomal subunit | 8.10E-07 |
| 7 | GO:0031428: box C/D snoRNP complex | 5.05E-06 |
| 8 | GO:0005759: mitochondrial matrix | 1.04E-05 |
| 9 | GO:0005774: vacuolar membrane | 3.50E-05 |
| 10 | GO:0005829: cytosol | 1.28E-04 |
| 11 | GO:0031429: box H/ACA snoRNP complex | 2.55E-04 |
| 12 | GO:0015934: large ribosomal subunit | 5.28E-04 |
| 13 | GO:0009506: plasmodesma | 9.84E-04 |
| 14 | GO:0005747: mitochondrial respiratory chain complex I | 1.18E-03 |
| 15 | GO:0005834: heterotrimeric G-protein complex | 1.21E-03 |
| 16 | GO:0015030: Cajal body | 1.22E-03 |
| 17 | GO:0005773: vacuole | 2.36E-03 |
| 18 | GO:0015935: small ribosomal subunit | 2.72E-03 |
| 19 | GO:0009532: plastid stroma | 2.72E-03 |
| 20 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.91E-03 |
| 21 | GO:0005737: cytoplasm | 4.12E-03 |
| 22 | GO:0016592: mediator complex | 4.58E-03 |
| 23 | GO:0010319: stromule | 5.21E-03 |
| 24 | GO:0030529: intracellular ribonucleoprotein complex | 5.64E-03 |
| 25 | GO:0005618: cell wall | 6.05E-03 |
| 26 | GO:0005739: mitochondrion | 1.79E-02 |
| 27 | GO:0005634: nucleus | 2.27E-02 |