co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G03120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019428: allantoin biosynthetic process	0.00E+00
2	GO:0006069: ethanol oxidation	0.00E+00
3	GO:0006721: terpenoid metabolic process	0.00E+00
4	GO:0006592: ornithine biosynthetic process	0.00E+00
5	GO:0046890: regulation of lipid biosynthetic process	0.00E+00
6	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
7	GO:0046292: formaldehyde metabolic process	0.00E+00
8	GO:0010513: positive regulation of phosphatidylinositol biosynthetic process	0.00E+00
9	GO:0006108: malate metabolic process	2.64E-05
10	GO:0009853: photorespiration	6.31E-05
11	GO:0051603: proteolysis involved in cellular protein catabolic process	1.82E-04
12	GO:0010265: SCF complex assembly	2.18E-04
13	GO:0006144: purine nucleobase metabolic process	2.18E-04
14	GO:0001560: regulation of cell growth by extracellular stimulus	2.18E-04
15	GO:0006835: dicarboxylic acid transport	2.18E-04
16	GO:0019628: urate catabolic process	2.18E-04
17	GO:0016487: farnesol metabolic process	2.18E-04
18	GO:0006007: glucose catabolic process	2.18E-04
19	GO:0031468: nuclear envelope reassembly	2.18E-04
20	GO:0006432: phenylalanyl-tRNA aminoacylation	4.86E-04
21	GO:0080026: response to indolebutyric acid	4.86E-04
22	GO:0019441: tryptophan catabolic process to kynurenine	4.86E-04
23	GO:0097054: L-glutamate biosynthetic process	4.86E-04
24	GO:0019222: regulation of metabolic process	4.86E-04
25	GO:0055088: lipid homeostasis	4.86E-04
26	GO:0019388: galactose catabolic process	4.86E-04
27	GO:0006006: glucose metabolic process	5.92E-04
28	GO:0050826: response to freezing	5.92E-04
29	GO:0006099: tricarboxylic acid cycle	6.99E-04
30	GO:0007623: circadian rhythm	7.25E-04
31	GO:0046417: chorismate metabolic process	7.90E-04
32	GO:0045793: positive regulation of cell size	7.90E-04
33	GO:0006760: folic acid-containing compound metabolic process	7.90E-04
34	GO:0071494: cellular response to UV-C	7.90E-04
35	GO:0055114: oxidation-reduction process	8.23E-04
36	GO:0006487: protein N-linked glycosylation	9.15E-04
37	GO:0015992: proton transport	1.10E-03
38	GO:1901332: negative regulation of lateral root development	1.13E-03
39	GO:0032981: mitochondrial respiratory chain complex I assembly	1.13E-03
40	GO:0009590: detection of gravity	1.13E-03
41	GO:0006168: adenine salvage	1.13E-03
42	GO:0051289: protein homotetramerization	1.13E-03
43	GO:1902290: positive regulation of defense response to oomycetes	1.13E-03
44	GO:0080024: indolebutyric acid metabolic process	1.13E-03
45	GO:0032877: positive regulation of DNA endoreduplication	1.13E-03
46	GO:0006166: purine ribonucleoside salvage	1.13E-03
47	GO:0006107: oxaloacetate metabolic process	1.13E-03
48	GO:0006241: CTP biosynthetic process	1.13E-03
49	GO:0006537: glutamate biosynthetic process	1.13E-03
50	GO:0006165: nucleoside diphosphate phosphorylation	1.13E-03
51	GO:0006228: UTP biosynthetic process	1.13E-03
52	GO:0006012: galactose metabolic process	1.31E-03
53	GO:0005975: carbohydrate metabolic process	1.42E-03
54	GO:0006749: glutathione metabolic process	1.50E-03
55	GO:0032366: intracellular sterol transport	1.50E-03
56	GO:0044205: 'de novo' UMP biosynthetic process	1.50E-03
57	GO:0019676: ammonia assimilation cycle	1.50E-03
58	GO:0015743: malate transport	1.50E-03
59	GO:0051781: positive regulation of cell division	1.50E-03
60	GO:0051365: cellular response to potassium ion starvation	1.50E-03
61	GO:0006183: GTP biosynthetic process	1.50E-03
62	GO:0006221: pyrimidine nucleotide biosynthetic process	1.50E-03
63	GO:0046686: response to cadmium ion	1.51E-03
64	GO:0006096: glycolytic process	1.62E-03
65	GO:0042391: regulation of membrane potential	1.66E-03
66	GO:0009620: response to fungus	1.83E-03
67	GO:0009229: thiamine diphosphate biosynthetic process	1.91E-03
68	GO:0044209: AMP salvage	1.91E-03
69	GO:0015986: ATP synthesis coupled proton transport	1.92E-03
70	GO:0003006: developmental process involved in reproduction	2.35E-03
71	GO:0009228: thiamine biosynthetic process	2.35E-03
72	GO:0009117: nucleotide metabolic process	2.35E-03
73	GO:0006751: glutathione catabolic process	2.35E-03
74	GO:0070814: hydrogen sulfide biosynthetic process	2.35E-03
75	GO:0006796: phosphate-containing compound metabolic process	2.35E-03
76	GO:0009612: response to mechanical stimulus	2.83E-03
77	GO:0009615: response to virus	3.17E-03
78	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	3.33E-03
79	GO:0050790: regulation of catalytic activity	3.33E-03
80	GO:0010044: response to aluminum ion	3.33E-03
81	GO:0071446: cellular response to salicylic acid stimulus	3.33E-03
82	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.33E-03
83	GO:0016042: lipid catabolic process	3.35E-03
84	GO:0009751: response to salicylic acid	3.43E-03
85	GO:0006491: N-glycan processing	3.86E-03
86	GO:1900150: regulation of defense response to fungus	3.86E-03
87	GO:0009690: cytokinin metabolic process	3.86E-03
88	GO:0000028: ribosomal small subunit assembly	3.86E-03
89	GO:0048658: anther wall tapetum development	3.86E-03
90	GO:0005978: glycogen biosynthetic process	3.86E-03
91	GO:0006526: arginine biosynthetic process	4.42E-03
92	GO:0009407: toxin catabolic process	4.55E-03
93	GO:0009821: alkaloid biosynthetic process	5.00E-03
94	GO:0080144: amino acid homeostasis	5.00E-03
95	GO:0051453: regulation of intracellular pH	5.62E-03
96	GO:0006631: fatty acid metabolic process	6.20E-03
97	GO:0000103: sulfate assimilation	6.25E-03
98	GO:0043069: negative regulation of programmed cell death	6.25E-03
99	GO:0009970: cellular response to sulfate starvation	6.25E-03
100	GO:0006896: Golgi to vacuole transport	6.25E-03
101	GO:0006995: cellular response to nitrogen starvation	6.25E-03
102	GO:0009926: auxin polar transport	6.73E-03
103	GO:0018119: peptidyl-cysteine S-nitrosylation	6.91E-03
104	GO:0048229: gametophyte development	6.91E-03
105	GO:0072593: reactive oxygen species metabolic process	6.91E-03
106	GO:0009073: aromatic amino acid family biosynthetic process	6.91E-03
107	GO:0009636: response to toxic substance	7.56E-03
108	GO:0002213: defense response to insect	7.60E-03
109	GO:0006807: nitrogen compound metabolic process	8.30E-03
110	GO:2000028: regulation of photoperiodism, flowering	8.30E-03
111	GO:0006094: gluconeogenesis	8.30E-03
112	GO:0010020: chloroplast fission	9.03E-03
113	GO:0007034: vacuolar transport	9.03E-03
114	GO:0010039: response to iron ion	9.79E-03
115	GO:0007030: Golgi organization	9.79E-03
116	GO:0006071: glycerol metabolic process	1.06E-02
117	GO:0048316: seed development	1.11E-02
118	GO:0009116: nucleoside metabolic process	1.14E-02
119	GO:0009863: salicylic acid mediated signaling pathway	1.14E-02
120	GO:0045454: cell redox homeostasis	1.18E-02
121	GO:0009695: jasmonic acid biosynthetic process	1.22E-02
122	GO:0019953: sexual reproduction	1.22E-02
123	GO:0019915: lipid storage	1.30E-02
124	GO:0061077: chaperone-mediated protein folding	1.30E-02
125	GO:0031408: oxylipin biosynthetic process	1.30E-02
126	GO:0080092: regulation of pollen tube growth	1.39E-02
127	GO:0019748: secondary metabolic process	1.39E-02
128	GO:0009058: biosynthetic process	1.71E-02
129	GO:0080022: primary root development	1.75E-02
130	GO:0034220: ion transmembrane transport	1.75E-02
131	GO:0000413: protein peptidyl-prolyl isomerization	1.75E-02
132	GO:0010051: xylem and phloem pattern formation	1.75E-02
133	GO:0010118: stomatal movement	1.75E-02
134	GO:0015991: ATP hydrolysis coupled proton transport	1.75E-02
135	GO:0042631: cellular response to water deprivation	1.75E-02
136	GO:0006508: proteolysis	1.84E-02
137	GO:0006662: glycerol ether metabolic process	1.85E-02
138	GO:0006520: cellular amino acid metabolic process	1.85E-02
139	GO:0061025: membrane fusion	1.95E-02
140	GO:0006814: sodium ion transport	1.95E-02
141	GO:0019252: starch biosynthetic process	2.05E-02
142	GO:0055072: iron ion homeostasis	2.05E-02
143	GO:0006623: protein targeting to vacuole	2.05E-02
144	GO:0010228: vegetative to reproductive phase transition of meristem	2.35E-02
145	GO:1901657: glycosyl compound metabolic process	2.36E-02
146	GO:0009828: plant-type cell wall loosening	2.46E-02
147	GO:0010286: heat acclimation	2.57E-02
148	GO:0009617: response to bacterium	2.68E-02
149	GO:0000910: cytokinesis	2.68E-02
150	GO:0009735: response to cytokinin	2.84E-02
151	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.91E-02
152	GO:0009627: systemic acquired resistance	3.02E-02
153	GO:0006974: cellular response to DNA damage stimulus	3.02E-02
154	GO:0009555: pollen development	3.17E-02
155	GO:0009826: unidimensional cell growth	3.34E-02
156	GO:0008219: cell death	3.37E-02
157	GO:0009817: defense response to fungus, incompatible interaction	3.37E-02
158	GO:0010311: lateral root formation	3.49E-02
159	GO:0048767: root hair elongation	3.49E-02
160	GO:0006811: ion transport	3.62E-02
161	GO:0010043: response to zinc ion	3.74E-02
162	GO:0007568: aging	3.74E-02
163	GO:0009631: cold acclimation	3.74E-02
164	GO:0009409: response to cold	3.76E-02
165	GO:0045087: innate immune response	3.99E-02
166	GO:0034599: cellular response to oxidative stress	4.12E-02
167	GO:0042542: response to hydrogen peroxide	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0050334: thiaminase activity	0.00E+00
2	GO:0004151: dihydroorotase activity	0.00E+00
3	GO:0017153: sodium:dicarboxylate symporter activity	0.00E+00
4	GO:0047886: farnesol dehydrogenase activity	0.00E+00
5	GO:0008777: acetylornithine deacetylase activity	0.00E+00
6	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
7	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
8	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
9	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
10	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
11	GO:0015930: glutamate synthase activity	0.00E+00
12	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
13	GO:0050152: omega-amidase activity	0.00E+00
14	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
15	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
16	GO:0004576: oligosaccharyl transferase activity	3.41E-05
17	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	5.47E-05
18	GO:0030060: L-malate dehydrogenase activity	1.11E-04
19	GO:0005261: cation channel activity	1.11E-04
20	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.56E-04
21	GO:0004034: aldose 1-epimerase activity	1.88E-04
22	GO:0004321: fatty-acyl-CoA synthase activity	2.18E-04
23	GO:0010209: vacuolar sorting signal binding	2.18E-04
24	GO:0016041: glutamate synthase (ferredoxin) activity	2.18E-04
25	GO:0046480: galactolipid galactosyltransferase activity	2.18E-04
26	GO:0004347: glucose-6-phosphate isomerase activity	2.18E-04
27	GO:0080079: cellobiose glucosidase activity	2.18E-04
28	GO:0016788: hydrolase activity, acting on ester bonds	2.65E-04
29	GO:0051980: iron-nicotianamine transmembrane transporter activity	4.86E-04
30	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	4.86E-04
31	GO:0004106: chorismate mutase activity	4.86E-04
32	GO:0004061: arylformamidase activity	4.86E-04
33	GO:0004826: phenylalanine-tRNA ligase activity	4.86E-04
34	GO:0004614: phosphoglucomutase activity	4.86E-04
35	GO:0050897: cobalt ion binding	5.89E-04
36	GO:0004022: alcohol dehydrogenase (NAD) activity	5.92E-04
37	GO:0004089: carbonate dehydratase activity	5.92E-04
38	GO:0030552: cAMP binding	7.45E-04
39	GO:0030553: cGMP binding	7.45E-04
40	GO:0004557: alpha-galactosidase activity	7.90E-04
41	GO:0004781: sulfate adenylyltransferase (ATP) activity	7.90E-04
42	GO:0052692: raffinose alpha-galactosidase activity	7.90E-04
43	GO:0004185: serine-type carboxypeptidase activity	9.07E-04
44	GO:0005216: ion channel activity	1.01E-03
45	GO:0005507: copper ion binding	1.03E-03
46	GO:0004298: threonine-type endopeptidase activity	1.10E-03
47	GO:0004550: nucleoside diphosphate kinase activity	1.13E-03
48	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.13E-03
49	GO:0035529: NADH pyrophosphatase activity	1.13E-03
50	GO:0003999: adenine phosphoribosyltransferase activity	1.13E-03
51	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.50E-03
52	GO:0004301: epoxide hydrolase activity	1.50E-03
53	GO:0010011: auxin binding	1.50E-03
54	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.50E-03
55	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	1.50E-03
56	GO:0005249: voltage-gated potassium channel activity	1.66E-03
57	GO:0030551: cyclic nucleotide binding	1.66E-03
58	GO:0004040: amidase activity	1.91E-03
59	GO:0051538: 3 iron, 4 sulfur cluster binding	1.91E-03
60	GO:0015035: protein disulfide oxidoreductase activity	2.13E-03
61	GO:0008137: NADH dehydrogenase (ubiquinone) activity	2.20E-03
62	GO:0052689: carboxylic ester hydrolase activity	2.25E-03
63	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	2.35E-03
64	GO:0016615: malate dehydrogenase activity	2.35E-03
65	GO:0051117: ATPase binding	2.35E-03
66	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	2.35E-03
67	GO:0004602: glutathione peroxidase activity	2.83E-03
68	GO:0042162: telomeric DNA binding	3.33E-03
69	GO:0004427: inorganic diphosphatase activity	3.33E-03
70	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.33E-03
71	GO:0015140: malate transmembrane transporter activity	3.33E-03
72	GO:0030247: polysaccharide binding	3.72E-03
73	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.86E-03
74	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.00E-03
75	GO:0016207: 4-coumarate-CoA ligase activity	5.00E-03
76	GO:0008889: glycerophosphodiester phosphodiesterase activity	5.00E-03
77	GO:0016844: strictosidine synthase activity	5.62E-03
78	GO:0045309: protein phosphorylated amino acid binding	5.62E-03
79	GO:0051539: 4 iron, 4 sulfur cluster binding	5.95E-03
80	GO:0004364: glutathione transferase activity	6.46E-03
81	GO:0008794: arsenate reductase (glutaredoxin) activity	6.91E-03
82	GO:0005089: Rho guanyl-nucleotide exchange factor activity	6.91E-03
83	GO:0004129: cytochrome-c oxidase activity	6.91E-03
84	GO:0019904: protein domain specific binding	6.91E-03
85	GO:0000049: tRNA binding	7.60E-03
86	GO:0015198: oligopeptide transporter activity	7.60E-03
87	GO:0008378: galactosyltransferase activity	7.60E-03
88	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.86E-03
89	GO:0031072: heat shock protein binding	8.30E-03
90	GO:0008266: poly(U) RNA binding	9.03E-03
91	GO:0016298: lipase activity	9.40E-03
92	GO:0008234: cysteine-type peptidase activity	1.01E-02
93	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.11E-02
94	GO:0043130: ubiquitin binding	1.14E-02
95	GO:0005528: FK506 binding	1.14E-02
96	GO:0022857: transmembrane transporter activity	1.22E-02
97	GO:0008324: cation transmembrane transporter activity	1.22E-02
98	GO:0030246: carbohydrate binding	1.31E-02
99	GO:0047134: protein-disulfide reductase activity	1.66E-02
100	GO:0004791: thioredoxin-disulfide reductase activity	1.95E-02
101	GO:0016853: isomerase activity	1.95E-02
102	GO:0050662: coenzyme binding	1.95E-02
103	GO:0004872: receptor activity	2.05E-02
104	GO:0004197: cysteine-type endopeptidase activity	2.25E-02
105	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.36E-02
106	GO:0008237: metallopeptidase activity	2.57E-02
107	GO:0016787: hydrolase activity	2.67E-02
108	GO:0015250: water channel activity	2.79E-02
109	GO:0008236: serine-type peptidase activity	3.25E-02
110	GO:0000287: magnesium ion binding	3.41E-02
111	GO:0030145: manganese ion binding	3.74E-02
112	GO:0003697: single-stranded DNA binding	3.99E-02
113	GO:0008233: peptidase activity	4.22E-02
114	GO:0008422: beta-glucosidase activity	4.25E-02
115	GO:0050661: NADP binding	4.38E-02
116	GO:0046872: metal ion binding	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0016469: proton-transporting two-sector ATPase complex	0.00E+00
2	GO:0005773: vacuole	5.22E-09
3	GO:0005829: cytosol	7.90E-09
4	GO:0005747: mitochondrial respiratory chain complex I	5.10E-08
5	GO:0045271: respiratory chain complex I	1.82E-06
6	GO:0005783: endoplasmic reticulum	3.02E-05
7	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	3.41E-05
8	GO:0005753: mitochondrial proton-transporting ATP synthase complex	3.90E-05
9	GO:0008250: oligosaccharyltransferase complex	5.47E-05
10	GO:0031966: mitochondrial membrane	1.52E-04
11	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	2.18E-04
12	GO:0009536: plastid	2.41E-04
13	GO:0005697: telomerase holoenzyme complex	4.86E-04
14	GO:0005764: lysosome	6.66E-04
15	GO:0005774: vacuolar membrane	1.05E-03
16	GO:0005839: proteasome core complex	1.10E-03
17	GO:0048046: apoplast	1.19E-03
18	GO:0016471: vacuolar proton-transporting V-type ATPase complex	1.50E-03
19	GO:0005746: mitochondrial respiratory chain	1.91E-03
20	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	2.35E-03
21	GO:0005777: peroxisome	2.67E-03
22	GO:0010319: stromule	2.82E-03
23	GO:0031359: integral component of chloroplast outer membrane	3.33E-03
24	GO:0005788: endoplasmic reticulum lumen	3.35E-03
25	GO:0005759: mitochondrial matrix	3.64E-03
26	GO:0009507: chloroplast	3.71E-03
27	GO:0009501: amyloplast	3.86E-03
28	GO:0045273: respiratory chain complex II	3.86E-03
29	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.86E-03
30	GO:0009707: chloroplast outer membrane	4.12E-03
31	GO:0005618: cell wall	4.19E-03
32	GO:0000325: plant-type vacuole	4.76E-03
33	GO:0005763: mitochondrial small ribosomal subunit	5.00E-03
34	GO:0005887: integral component of plasma membrane	5.57E-03
35	GO:0030665: clathrin-coated vesicle membrane	5.62E-03
36	GO:0005886: plasma membrane	5.83E-03
37	GO:0017119: Golgi transport complex	6.25E-03
38	GO:0009508: plastid chromosome	8.30E-03
39	GO:0005750: mitochondrial respiratory chain complex III	9.03E-03
40	GO:0000502: proteasome complex	9.08E-03
41	GO:0009505: plant-type cell wall	1.07E-02
42	GO:0005758: mitochondrial intermembrane space	1.14E-02
43	GO:0016020: membrane	1.31E-02
44	GO:0005794: Golgi apparatus	1.43E-02
45	GO:0005739: mitochondrion	1.51E-02
46	GO:0009543: chloroplast thylakoid lumen	1.62E-02
47	GO:0009941: chloroplast envelope	1.63E-02
48	GO:0005623: cell	1.67E-02
49	GO:0005770: late endosome	1.85E-02
50	GO:0009295: nucleoid	2.57E-02
51	GO:0005576: extracellular region	3.21E-02
52	GO:0009570: chloroplast stroma	3.23E-02
53	GO:0016021: integral component of membrane	3.82E-02
54	GO:0031969: chloroplast membrane	4.30E-02
55	GO:0031902: late endosome membrane	4.51E-02