co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G02490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006005: L-fucose biosynthetic process	0.00E+00
2	GO:1904580: regulation of intracellular mRNA localization	0.00E+00
3	GO:0010324: membrane invagination	0.00E+00
4	GO:0043462: regulation of ATPase activity	0.00E+00
5	GO:1902001: fatty acid transmembrane transport	0.00E+00
6	GO:0009408: response to heat	2.27E-07
7	GO:0051131: chaperone-mediated protein complex assembly	9.85E-07
8	GO:0009073: aromatic amino acid family biosynthetic process	3.96E-05
9	GO:0051014: actin filament severing	4.04E-05
10	GO:0071277: cellular response to calcium ion	4.04E-05
11	GO:0099636: cytoplasmic streaming	4.04E-05
12	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	4.04E-05
13	GO:0042350: GDP-L-fucose biosynthetic process	4.04E-05
14	GO:0006457: protein folding	4.22E-05
15	GO:0000266: mitochondrial fission	4.67E-05
16	GO:0080147: root hair cell development	9.13E-05
17	GO:0015908: fatty acid transport	1.00E-04
18	GO:0071668: plant-type cell wall assembly	1.00E-04
19	GO:1902066: regulation of cell wall pectin metabolic process	1.00E-04
20	GO:0055088: lipid homeostasis	1.00E-04
21	GO:1901672: positive regulation of systemic acquired resistance	1.73E-04
22	GO:0048586: regulation of long-day photoperiodism, flowering	1.73E-04
23	GO:0032922: circadian regulation of gene expression	1.73E-04
24	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.73E-04
25	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	1.73E-04
26	GO:0010104: regulation of ethylene-activated signaling pathway	2.55E-04
27	GO:0080037: negative regulation of cytokinin-activated signaling pathway	3.43E-04
28	GO:0051764: actin crosslink formation	3.43E-04
29	GO:0048830: adventitious root development	3.43E-04
30	GO:2000762: regulation of phenylpropanoid metabolic process	4.37E-04
31	GO:0033365: protein localization to organelle	5.37E-04
32	GO:0010337: regulation of salicylic acid metabolic process	5.37E-04
33	GO:0009759: indole glucosinolate biosynthetic process	5.37E-04
34	GO:0009423: chorismate biosynthetic process	6.40E-04
35	GO:0033962: cytoplasmic mRNA processing body assembly	6.40E-04
36	GO:0006897: endocytosis	6.80E-04
37	GO:0051693: actin filament capping	7.49E-04
38	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	8.61E-04
39	GO:0030162: regulation of proteolysis	8.61E-04
40	GO:0050821: protein stabilization	8.61E-04
41	GO:0010208: pollen wall assembly	9.77E-04
42	GO:0007338: single fertilization	1.10E-03
43	GO:0008202: steroid metabolic process	1.22E-03
44	GO:1900426: positive regulation of defense response to bacterium	1.22E-03
45	GO:0090332: stomatal closure	1.22E-03
46	GO:0030042: actin filament depolymerization	1.22E-03
47	GO:0048268: clathrin coat assembly	1.22E-03
48	GO:0009641: shade avoidance	1.35E-03
49	GO:0006896: Golgi to vacuole transport	1.35E-03
50	GO:0009682: induced systemic resistance	1.49E-03
51	GO:0052544: defense response by callose deposition in cell wall	1.49E-03
52	GO:0009684: indoleacetic acid biosynthetic process	1.49E-03
53	GO:0006913: nucleocytoplasmic transport	1.49E-03
54	GO:0015706: nitrate transport	1.63E-03
55	GO:0007015: actin filament organization	1.92E-03
56	GO:0006446: regulation of translational initiation	1.92E-03
57	GO:0010167: response to nitrate	2.07E-03
58	GO:0007033: vacuole organization	2.07E-03
59	GO:0009825: multidimensional cell growth	2.07E-03
60	GO:0000162: tryptophan biosynthetic process	2.23E-03
61	GO:0007010: cytoskeleton organization	2.39E-03
62	GO:0010187: negative regulation of seed germination	2.39E-03
63	GO:0051017: actin filament bundle assembly	2.39E-03
64	GO:0006952: defense response	2.55E-03
65	GO:0003333: amino acid transmembrane transport	2.72E-03
66	GO:0061077: chaperone-mediated protein folding	2.72E-03
67	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.89E-03
68	GO:0071456: cellular response to hypoxia	2.89E-03
69	GO:0071472: cellular response to salt stress	3.80E-03
70	GO:0042742: defense response to bacterium	4.30E-03
71	GO:0010090: trichome morphogenesis	4.79E-03
72	GO:0009567: double fertilization forming a zygote and endosperm	5.00E-03
73	GO:0010286: heat acclimation	5.21E-03
74	GO:0009911: positive regulation of flower development	5.64E-03
75	GO:0009816: defense response to bacterium, incompatible interaction	5.86E-03
76	GO:0042128: nitrate assimilation	6.09E-03
77	GO:0048573: photoperiodism, flowering	6.31E-03
78	GO:0048767: root hair elongation	7.01E-03
79	GO:0008152: metabolic process	7.17E-03
80	GO:0009631: cold acclimation	7.49E-03
81	GO:0006865: amino acid transport	7.74E-03
82	GO:0045087: innate immune response	7.99E-03
83	GO:0010114: response to red light	9.53E-03
84	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.09E-02
85	GO:0009737: response to abscisic acid	1.12E-02
86	GO:0006396: RNA processing	1.54E-02
87	GO:0006468: protein phosphorylation	1.66E-02
88	GO:0006413: translational initiation	2.12E-02
89	GO:0040008: regulation of growth	2.15E-02
90	GO:0010150: leaf senescence	2.22E-02
91	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.41E-02
92	GO:0006470: protein dephosphorylation	2.45E-02
93	GO:0007166: cell surface receptor signaling pathway	2.45E-02
94	GO:0006970: response to osmotic stress	3.20E-02
95	GO:0048366: leaf development	3.41E-02
96	GO:0006869: lipid transport	4.30E-02
97	GO:0032259: methylation	4.53E-02
98	GO:0048364: root development	4.81E-02
99	GO:0007165: signal transduction	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0004107: chorismate synthase activity	0.00E+00
2	GO:0004164: diphthine synthase activity	0.00E+00
3	GO:0051082: unfolded protein binding	3.98E-06
4	GO:0015245: fatty acid transporter activity	4.04E-05
5	GO:0050577: GDP-L-fucose synthase activity	4.04E-05
6	GO:0031072: heat shock protein binding	5.43E-05
7	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	1.00E-04
8	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	1.00E-04
9	GO:0032934: sterol binding	1.00E-04
10	GO:0046527: glucosyltransferase activity	3.43E-04
11	GO:0004012: phospholipid-translocating ATPase activity	6.40E-04
12	GO:0004656: procollagen-proline 4-dioxygenase activity	6.40E-04
13	GO:0004525: ribonuclease III activity	8.61E-04
14	GO:0008142: oxysterol binding	9.77E-04
15	GO:0015112: nitrate transmembrane transporter activity	1.22E-03
16	GO:0005524: ATP binding	1.23E-03
17	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.25E-03
18	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.25E-03
19	GO:0005545: 1-phosphatidylinositol binding	1.35E-03
20	GO:0003729: mRNA binding	1.37E-03
21	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.77E-03
22	GO:0031418: L-ascorbic acid binding	2.39E-03
23	GO:0008194: UDP-glycosyltransferase activity	2.60E-03
24	GO:0030276: clathrin binding	3.80E-03
25	GO:0010181: FMN binding	3.99E-03
26	GO:0050662: coenzyme binding	3.99E-03
27	GO:0016853: isomerase activity	3.99E-03
28	GO:0051015: actin filament binding	4.79E-03
29	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.99E-03
30	GO:0015171: amino acid transmembrane transporter activity	1.26E-02
31	GO:0031625: ubiquitin protein ligase binding	1.26E-02
32	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.35E-02
33	GO:0003779: actin binding	1.48E-02
34	GO:0008026: ATP-dependent helicase activity	1.57E-02
35	GO:0005525: GTP binding	1.91E-02
36	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.12E-02
37	GO:0008017: microtubule binding	2.30E-02
38	GO:0005506: iron ion binding	2.31E-02
39	GO:0003743: translation initiation factor activity	2.48E-02
40	GO:0008168: methyltransferase activity	2.95E-02
41	GO:0000287: magnesium ion binding	2.99E-02
42	GO:0004674: protein serine/threonine kinase activity	3.23E-02
43	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.25E-02
44	GO:0004722: protein serine/threonine phosphatase activity	4.30E-02
45	GO:0003924: GTPase activity	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	9.00E-05
2	GO:0005901: caveola	1.00E-04
3	GO:0030136: clathrin-coated vesicle	1.65E-04
4	GO:0005884: actin filament	1.49E-03
5	GO:0005730: nucleolus	1.66E-03
6	GO:0005794: Golgi apparatus	1.91E-03
7	GO:0005741: mitochondrial outer membrane	2.72E-03
8	GO:0005905: clathrin-coated pit	2.72E-03
9	GO:0009506: plasmodesma	3.44E-03
10	GO:0005829: cytosol	3.51E-03
11	GO:0005768: endosome	3.76E-03
12	GO:0005737: cytoplasm	4.12E-03
13	GO:0009536: plastid	5.57E-03
14	GO:0000932: P-body	5.64E-03
15	GO:0000139: Golgi membrane	6.32E-03
16	GO:0019005: SCF ubiquitin ligase complex	6.77E-03
17	GO:0043231: intracellular membrane-bounded organelle	7.17E-03
18	GO:0031902: late endosome membrane	9.01E-03
19	GO:0005856: cytoskeleton	1.03E-02
20	GO:0005783: endoplasmic reticulum	1.43E-02
21	GO:0009706: chloroplast inner membrane	1.51E-02
22	GO:0005623: cell	1.80E-02
23	GO:0009524: phragmoplast	1.84E-02
24	GO:0005802: trans-Golgi network	1.86E-02
25	GO:0005622: intracellular	2.06E-02
26	GO:0005874: microtubule	3.45E-02
27	GO:0005789: endoplasmic reticulum membrane	3.58E-02
28	GO:0016020: membrane	4.91E-02