co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G02100

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080053: response to phenylalanine	0.00E+00
2	GO:0045730: respiratory burst	0.00E+00
3	GO:0043462: regulation of ATPase activity	0.00E+00
4	GO:1902001: fatty acid transmembrane transport	0.00E+00
5	GO:0043201: response to leucine	0.00E+00
6	GO:0080052: response to histidine	0.00E+00
7	GO:0002237: response to molecule of bacterial origin	2.55E-06
8	GO:0080147: root hair cell development	4.61E-06
9	GO:0009423: chorismate biosynthetic process	1.91E-05
10	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.42E-05
11	GO:0009408: response to heat	3.70E-05
12	GO:0003400: regulation of COPII vesicle coating	7.23E-05
13	GO:0046167: glycerol-3-phosphate biosynthetic process	7.23E-05
14	GO:0009609: response to symbiotic bacterium	7.23E-05
15	GO:0006007: glucose catabolic process	7.23E-05
16	GO:0009073: aromatic amino acid family biosynthetic process	9.43E-05
17	GO:0000266: mitochondrial fission	1.10E-04
18	GO:0042939: tripeptide transport	1.74E-04
19	GO:0030187: melatonin biosynthetic process	1.74E-04
20	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.74E-04
21	GO:0071668: plant-type cell wall assembly	1.74E-04
22	GO:0051262: protein tetramerization	1.74E-04
23	GO:1902066: regulation of cell wall pectin metabolic process	1.74E-04
24	GO:0055088: lipid homeostasis	1.74E-04
25	GO:0006641: triglyceride metabolic process	1.74E-04
26	GO:0010372: positive regulation of gibberellin biosynthetic process	1.74E-04
27	GO:0019632: shikimate metabolic process	1.74E-04
28	GO:0015908: fatty acid transport	1.74E-04
29	GO:0048586: regulation of long-day photoperiodism, flowering	2.93E-04
30	GO:0032922: circadian regulation of gene expression	2.93E-04
31	GO:0019563: glycerol catabolic process	2.93E-04
32	GO:0006065: UDP-glucuronate biosynthetic process	2.93E-04
33	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	2.93E-04
34	GO:0052546: cell wall pectin metabolic process	2.93E-04
35	GO:1901672: positive regulation of systemic acquired resistance	2.93E-04
36	GO:0009306: protein secretion	3.31E-04
37	GO:0043207: response to external biotic stimulus	4.23E-04
38	GO:0006072: glycerol-3-phosphate metabolic process	4.23E-04
39	GO:0010104: regulation of ethylene-activated signaling pathway	4.23E-04
40	GO:0010188: response to microbial phytotoxin	5.65E-04
41	GO:0042938: dipeptide transport	5.65E-04
42	GO:0080037: negative regulation of cytokinin-activated signaling pathway	5.65E-04
43	GO:0033356: UDP-L-arabinose metabolic process	5.65E-04
44	GO:2000762: regulation of phenylpropanoid metabolic process	7.14E-04
45	GO:0006461: protein complex assembly	7.14E-04
46	GO:0009164: nucleoside catabolic process	7.14E-04
47	GO:0009617: response to bacterium	7.67E-04
48	GO:0006888: ER to Golgi vesicle-mediated transport	8.59E-04
49	GO:0033365: protein localization to organelle	8.73E-04
50	GO:0009832: plant-type cell wall biogenesis	9.91E-04
51	GO:0015977: carbon fixation	1.04E-03
52	GO:0009610: response to symbiotic fungus	1.21E-03
53	GO:0098869: cellular oxidant detoxification	1.21E-03
54	GO:0000338: protein deneddylation	1.21E-03
55	GO:0071669: plant-type cell wall organization or biogenesis	1.21E-03
56	GO:0006457: protein folding	1.22E-03
57	GO:0006099: tricarboxylic acid cycle	1.23E-03
58	GO:0006402: mRNA catabolic process	1.40E-03
59	GO:0006605: protein targeting	1.40E-03
60	GO:0030162: regulation of proteolysis	1.40E-03
61	GO:0009808: lignin metabolic process	1.59E-03
62	GO:0006972: hyperosmotic response	1.59E-03
63	GO:0010208: pollen wall assembly	1.59E-03
64	GO:0009932: cell tip growth	1.59E-03
65	GO:0006754: ATP biosynthetic process	1.80E-03
66	GO:0015780: nucleotide-sugar transport	1.80E-03
67	GO:0006032: chitin catabolic process	2.23E-03
68	GO:0051555: flavonol biosynthetic process	2.23E-03
69	GO:0006896: Golgi to vacuole transport	2.23E-03
70	GO:0042742: defense response to bacterium	2.41E-03
71	GO:0010015: root morphogenesis	2.46E-03
72	GO:0009626: plant-type hypersensitive response	2.54E-03
73	GO:0015706: nitrate transport	2.70E-03
74	GO:0030036: actin cytoskeleton organization	2.94E-03
75	GO:0055046: microgametogenesis	2.94E-03
76	GO:0034605: cellular response to heat	3.19E-03
77	GO:0010053: root epidermal cell differentiation	3.44E-03
78	GO:0010167: response to nitrate	3.44E-03
79	GO:0016998: cell wall macromolecule catabolic process	4.54E-03
80	GO:0048511: rhythmic process	4.54E-03
81	GO:0016036: cellular response to phosphate starvation	4.58E-03
82	GO:0046686: response to cadmium ion	4.72E-03
83	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.83E-03
84	GO:0006817: phosphate ion transport	5.43E-03
85	GO:0009561: megagametogenesis	5.43E-03
86	GO:0010118: stomatal movement	6.05E-03
87	GO:0015991: ATP hydrolysis coupled proton transport	6.05E-03
88	GO:0009646: response to absence of light	6.70E-03
89	GO:0031047: gene silencing by RNA	7.72E-03
90	GO:0016579: protein deubiquitination	9.16E-03
91	GO:0016310: phosphorylation	9.39E-03
92	GO:0009615: response to virus	9.54E-03
93	GO:0009911: positive regulation of flower development	9.54E-03
94	GO:0042128: nitrate assimilation	1.03E-02
95	GO:0048573: photoperiodism, flowering	1.07E-02
96	GO:0016049: cell growth	1.11E-02
97	GO:0030244: cellulose biosynthetic process	1.15E-02
98	GO:0009631: cold acclimation	1.27E-02
99	GO:0016051: carbohydrate biosynthetic process	1.36E-02
100	GO:0009751: response to salicylic acid	1.37E-02
101	GO:0009753: response to jasmonic acid	1.50E-02
102	GO:0009651: response to salt stress	1.51E-02
103	GO:0006897: endocytosis	1.54E-02
104	GO:0051707: response to other organism	1.63E-02
105	GO:0009640: photomorphogenesis	1.63E-02
106	GO:0008643: carbohydrate transport	1.72E-02
107	GO:0006468: protein phosphorylation	1.75E-02
108	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.86E-02
109	GO:0009664: plant-type cell wall organization	1.91E-02
110	GO:0042538: hyperosmotic salinity response	1.91E-02
111	GO:0005975: carbohydrate metabolic process	1.93E-02
112	GO:0009809: lignin biosynthetic process	2.01E-02
113	GO:0009585: red, far-red light phototransduction	2.01E-02
114	GO:0006857: oligopeptide transport	2.11E-02
115	GO:0006096: glycolytic process	2.26E-02
116	GO:0009620: response to fungus	2.42E-02
117	GO:0009555: pollen development	2.48E-02
118	GO:0009611: response to wounding	2.53E-02
119	GO:0006396: RNA processing	2.64E-02
120	GO:0009742: brassinosteroid mediated signaling pathway	2.69E-02
121	GO:0009793: embryo development ending in seed dormancy	3.26E-02
122	GO:0042744: hydrogen peroxide catabolic process	3.32E-02
123	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.13E-02
124	GO:0006470: protein dephosphorylation	4.19E-02
125	GO:0007166: cell surface receptor signaling pathway	4.19E-02
126	GO:0071555: cell wall organization	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0030744: luteolin O-methyltransferase activity	0.00E+00
2	GO:0004370: glycerol kinase activity	0.00E+00
3	GO:0003855: 3-dehydroquinate dehydratase activity	0.00E+00
4	GO:0033799: myricetin 3'-O-methyltransferase activity	0.00E+00
5	GO:0004764: shikimate 3-dehydrogenase (NADP+) activity	0.00E+00
6	GO:0047763: caffeate O-methyltransferase activity	0.00E+00
7	GO:0050220: prostaglandin-E synthase activity	0.00E+00
8	GO:0004107: chorismate synthase activity	0.00E+00
9	GO:0030755: quercetin 3-O-methyltransferase activity	0.00E+00
10	GO:0004656: procollagen-proline 4-dioxygenase activity	1.91E-05
11	GO:0005090: Sar guanyl-nucleotide exchange factor activity	7.23E-05
12	GO:0017096: acetylserotonin O-methyltransferase activity	7.23E-05
13	GO:0015245: fatty acid transporter activity	7.23E-05
14	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	7.23E-05
15	GO:0031072: heat shock protein binding	1.27E-04
16	GO:0019200: carbohydrate kinase activity	1.74E-04
17	GO:0042937: tripeptide transporter activity	1.74E-04
18	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	1.74E-04
19	GO:0052691: UDP-arabinopyranose mutase activity	1.74E-04
20	GO:0003979: UDP-glucose 6-dehydrogenase activity	2.93E-04
21	GO:0008964: phosphoenolpyruvate carboxylase activity	2.93E-04
22	GO:0042936: dipeptide transporter activity	5.65E-04
23	GO:0016866: intramolecular transferase activity	5.65E-04
24	GO:0051020: GTPase binding	1.04E-03
25	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	1.04E-03
26	GO:0004012: phospholipid-translocating ATPase activity	1.04E-03
27	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.18E-03
28	GO:0005338: nucleotide-sugar transmembrane transporter activity	1.21E-03
29	GO:0004525: ribonuclease III activity	1.40E-03
30	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.80E-03
31	GO:0015112: nitrate transmembrane transporter activity	2.01E-03
32	GO:0004568: chitinase activity	2.23E-03
33	GO:0015020: glucuronosyltransferase activity	2.23E-03
34	GO:0005524: ATP binding	2.48E-03
35	GO:0051082: unfolded protein binding	2.86E-03
36	GO:0004022: alcohol dehydrogenase (NAD) activity	2.94E-03
37	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.94E-03
38	GO:0031418: L-ascorbic acid binding	3.98E-03
39	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	4.54E-03
40	GO:0016760: cellulose synthase (UDP-forming) activity	5.13E-03
41	GO:0010181: FMN binding	6.70E-03
42	GO:0004843: thiol-dependent ubiquitin-specific protease activity	7.38E-03
43	GO:0000287: magnesium ion binding	7.45E-03
44	GO:0004518: nuclease activity	7.72E-03
45	GO:0008375: acetylglucosaminyltransferase activity	1.03E-02
46	GO:0004721: phosphoprotein phosphatase activity	1.07E-02
47	GO:0005096: GTPase activator activity	1.19E-02
48	GO:0004722: protein serine/threonine phosphatase activity	1.24E-02
49	GO:0030145: manganese ion binding	1.27E-02
50	GO:0005515: protein binding	1.36E-02
51	GO:0050661: NADP binding	1.49E-02
52	GO:0005198: structural molecule activity	1.77E-02
53	GO:0051287: NAD binding	1.86E-02
54	GO:0003729: mRNA binding	1.88E-02
55	GO:0031625: ubiquitin protein ligase binding	2.16E-02
56	GO:0016301: kinase activity	2.48E-02
57	GO:0015035: protein disulfide oxidoreductase activity	2.64E-02
58	GO:0016746: transferase activity, transferring acyl groups	2.64E-02
59	GO:0004674: protein serine/threonine kinase activity	2.66E-02
60	GO:0008026: ATP-dependent helicase activity	2.69E-02
61	GO:0016787: hydrolase activity	2.96E-02
62	GO:0016740: transferase activity	3.02E-02
63	GO:0008565: protein transporter activity	3.44E-02
64	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.63E-02
65	GO:0005351: sugar:proton symporter activity	3.75E-02
66	GO:0008017: microtubule binding	3.94E-02
67	GO:0005525: GTP binding	4.06E-02
68	GO:0046872: metal ion binding	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	4.07E-07
2	GO:0005829: cytosol	6.49E-06
3	GO:0000139: Golgi membrane	2.24E-05
4	GO:0045252: oxoglutarate dehydrogenase complex	7.23E-05
5	GO:0016442: RISC complex	7.23E-05
6	GO:0000138: Golgi trans cisterna	7.23E-05
7	GO:0005794: Golgi apparatus	1.24E-04
8	GO:0016021: integral component of membrane	2.91E-04
9	GO:0005618: cell wall	3.90E-04
10	GO:0009506: plasmodesma	5.92E-04
11	GO:0005789: endoplasmic reticulum membrane	1.04E-03
12	GO:0005802: trans-Golgi network	1.69E-03
13	GO:0008180: COP9 signalosome	1.80E-03
14	GO:0010494: cytoplasmic stress granule	1.80E-03
15	GO:0005768: endosome	2.05E-03
16	GO:0030125: clathrin vesicle coat	2.23E-03
17	GO:0005740: mitochondrial envelope	2.23E-03
18	GO:0048471: perinuclear region of cytoplasm	2.46E-03
19	GO:0030176: integral component of endoplasmic reticulum membrane	3.44E-03
20	GO:0005795: Golgi stack	3.44E-03
21	GO:0005774: vacuolar membrane	4.34E-03
22	GO:0005741: mitochondrial outer membrane	4.54E-03
23	GO:0005905: clathrin-coated pit	4.54E-03
24	GO:0005783: endoplasmic reticulum	4.56E-03
25	GO:0030136: clathrin-coated vesicle	5.74E-03
26	GO:0005770: late endosome	6.38E-03
27	GO:0000932: P-body	9.54E-03
28	GO:0019005: SCF ubiquitin ligase complex	1.15E-02
29	GO:0031902: late endosome membrane	1.54E-02
30	GO:0016020: membrane	2.02E-02
31	GO:0005635: nuclear envelope	2.11E-02
32	GO:0005730: nucleolus	2.21E-02
33	GO:0010008: endosome membrane	2.31E-02
34	GO:0009706: chloroplast inner membrane	2.58E-02
35	GO:0005623: cell	3.09E-02
36	GO:0009524: phragmoplast	3.15E-02