co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G02040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0001881: receptor recycling	0.00E+00
2	GO:0006983: ER overload response	0.00E+00
3	GO:0043066: negative regulation of apoptotic process	3.07E-08
4	GO:0006144: purine nucleobase metabolic process	1.97E-05
5	GO:0019628: urate catabolic process	1.97E-05
6	GO:0042147: retrograde transport, endosome to Golgi	6.11E-05
7	GO:0006623: protein targeting to vacuole	8.58E-05
8	GO:0009410: response to xenobiotic stimulus	9.05E-05
9	GO:0008333: endosome to lysosome transport	9.05E-05
10	GO:0071786: endoplasmic reticulum tubular network organization	1.36E-04
11	GO:0006536: glutamate metabolic process	1.86E-04
12	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.40E-04
13	GO:0009099: valine biosynthetic process	3.57E-04
14	GO:0009082: branched-chain amino acid biosynthetic process	3.57E-04
15	GO:0048280: vesicle fusion with Golgi apparatus	3.57E-04
16	GO:0071669: plant-type cell wall organization or biogenesis	4.19E-04
17	GO:0030091: protein repair	4.84E-04
18	GO:0006367: transcription initiation from RNA polymerase II promoter	5.50E-04
19	GO:0009097: isoleucine biosynthetic process	5.50E-04
20	GO:0009098: leucine biosynthetic process	6.90E-04
21	GO:0043069: negative regulation of programmed cell death	7.62E-04
22	GO:0006896: Golgi to vacuole transport	7.62E-04
23	GO:0000038: very long-chain fatty acid metabolic process	8.37E-04
24	GO:0006790: sulfur compound metabolic process	9.12E-04
25	GO:0007034: vacuolar transport	1.07E-03
26	GO:0046854: phosphatidylinositol phosphorylation	1.15E-03
27	GO:0007031: peroxisome organization	1.15E-03
28	GO:0010167: response to nitrate	1.15E-03
29	GO:0009863: salicylic acid mediated signaling pathway	1.32E-03
30	GO:0009814: defense response, incompatible interaction	1.59E-03
31	GO:0006891: intra-Golgi vesicle-mediated transport	2.40E-03
32	GO:0009630: gravitropism	2.50E-03
33	GO:0006914: autophagy	2.73E-03
34	GO:0006888: ER to Golgi vesicle-mediated transport	3.43E-03
35	GO:0009631: cold acclimation	4.06E-03
36	GO:0034599: cellular response to oxidative stress	4.45E-03
37	GO:0009742: brassinosteroid mediated signaling pathway	8.39E-03
38	GO:0006413: translational initiation	1.12E-02
39	GO:0006470: protein dephosphorylation	1.30E-02
40	GO:0006629: lipid metabolic process	2.47E-02
41	GO:0009738: abscisic acid-activated signaling pathway	3.64E-02
42	GO:0006414: translational elongation	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0004846: urate oxidase activity	0.00E+00
2	GO:0070191: methionine-R-sulfoxide reductase activity	0.00E+00
3	GO:0019786: Atg8-specific protease activity	1.97E-05
4	GO:0019779: Atg8 activating enzyme activity	5.10E-05
5	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	9.05E-05
6	GO:0052654: L-leucine transaminase activity	1.36E-04
7	GO:0004351: glutamate decarboxylase activity	1.36E-04
8	GO:0052655: L-valine transaminase activity	1.36E-04
9	GO:0052656: L-isoleucine transaminase activity	1.36E-04
10	GO:0004084: branched-chain-amino-acid transaminase activity	1.86E-04
11	GO:0019776: Atg8 ligase activity	1.86E-04
12	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.57E-04
13	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.57E-04
14	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.57E-04
15	GO:0045309: protein phosphorylated amino acid binding	6.90E-04
16	GO:0019904: protein domain specific binding	8.37E-04
17	GO:0004872: receptor activity	2.29E-03
18	GO:0004722: protein serine/threonine phosphatase activity	2.38E-03
19	GO:0003746: translation elongation factor activity	4.32E-03
20	GO:0000149: SNARE binding	4.58E-03
21	GO:0005484: SNAP receptor activity	5.13E-03
22	GO:0005198: structural molecule activity	5.56E-03
23	GO:0030170: pyridoxal phosphate binding	1.01E-02
24	GO:0003824: catalytic activity	1.04E-02
25	GO:0003743: translation initiation factor activity	1.32E-02
26	GO:0042802: identical protein binding	1.40E-02
27	GO:0005515: protein binding	3.42E-02
28	GO:0046872: metal ion binding	4.22E-02
29	GO:0005516: calmodulin binding	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0031902: late endosome membrane	7.93E-06
3	GO:0009510: plasmodesmatal desmotubule	1.97E-05
4	GO:0071782: endoplasmic reticulum tubular network	1.36E-04
5	GO:0005775: vacuolar lumen	1.36E-04
6	GO:0005776: autophagosome	1.86E-04
7	GO:0005771: multivesicular body	2.97E-04
8	GO:0030904: retromer complex	2.97E-04
9	GO:0030140: trans-Golgi network transport vesicle	2.97E-04
10	GO:0005789: endoplasmic reticulum membrane	3.55E-04
11	GO:0012507: ER to Golgi transport vesicle membrane	4.84E-04
12	GO:0000421: autophagosome membrane	4.84E-04
13	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	4.84E-04
14	GO:0031410: cytoplasmic vesicle	1.59E-03
15	GO:0005770: late endosome	2.08E-03
16	GO:0009504: cell plate	2.29E-03
17	GO:0005788: endoplasmic reticulum lumen	3.19E-03
18	GO:0000325: plant-type vacuole	4.06E-03
19	GO:0031201: SNARE complex	4.86E-03
20	GO:0005774: vacuolar membrane	6.56E-03
21	GO:0005635: nuclear envelope	6.61E-03
22	GO:0005773: vacuole	1.13E-02
23	GO:0005794: Golgi apparatus	1.48E-02
24	GO:0005783: endoplasmic reticulum	1.60E-02
25	GO:0005874: microtubule	1.83E-02
26	GO:0043231: intracellular membrane-bounded organelle	2.65E-02
27	GO:0009506: plasmodesma	3.56E-02
28	GO:0005739: mitochondrion	3.58E-02
29	GO:0005777: peroxisome	4.11E-02