GO Enrichment Analysis of Co-expressed Genes with
AT4G40070
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1902325: negative regulation of chlorophyll biosynthetic process | 0.00E+00 |
| 2 | GO:0046680: response to DDT | 0.00E+00 |
| 3 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 4 | GO:1900409: positive regulation of cellular response to oxidative stress | 0.00E+00 |
| 5 | GO:0010019: chloroplast-nucleus signaling pathway | 1.05E-05 |
| 6 | GO:0009820: alkaloid metabolic process | 5.03E-05 |
| 7 | GO:0010365: positive regulation of ethylene biosynthetic process | 5.03E-05 |
| 8 | GO:0000032: cell wall mannoprotein biosynthetic process | 5.03E-05 |
| 9 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 5.03E-05 |
| 10 | GO:0032491: detection of molecule of fungal origin | 5.03E-05 |
| 11 | GO:0044550: secondary metabolite biosynthetic process | 9.15E-05 |
| 12 | GO:0002215: defense response to nematode | 1.23E-04 |
| 13 | GO:0002240: response to molecule of oomycetes origin | 1.23E-04 |
| 14 | GO:0055114: oxidation-reduction process | 1.37E-04 |
| 15 | GO:0009620: response to fungus | 1.41E-04 |
| 16 | GO:0071456: cellular response to hypoxia | 1.70E-04 |
| 17 | GO:0033591: response to L-ascorbic acid | 2.11E-04 |
| 18 | GO:0006954: inflammatory response | 2.11E-04 |
| 19 | GO:0009058: biosynthetic process | 2.34E-04 |
| 20 | GO:0009413: response to flooding | 3.09E-04 |
| 21 | GO:0009298: GDP-mannose biosynthetic process | 3.09E-04 |
| 22 | GO:0051365: cellular response to potassium ion starvation | 4.15E-04 |
| 23 | GO:0006564: L-serine biosynthetic process | 5.26E-04 |
| 24 | GO:0009817: defense response to fungus, incompatible interaction | 6.02E-04 |
| 25 | GO:0009228: thiamine biosynthetic process | 6.44E-04 |
| 26 | GO:0002238: response to molecule of fungal origin | 6.44E-04 |
| 27 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 7.68E-04 |
| 28 | GO:0050829: defense response to Gram-negative bacterium | 8.97E-04 |
| 29 | GO:0009642: response to light intensity | 1.03E-03 |
| 30 | GO:0006972: hyperosmotic response | 1.17E-03 |
| 31 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.17E-03 |
| 32 | GO:0009809: lignin biosynthetic process | 1.28E-03 |
| 33 | GO:0009821: alkaloid biosynthetic process | 1.32E-03 |
| 34 | GO:0010112: regulation of systemic acquired resistance | 1.32E-03 |
| 35 | GO:0006032: chitin catabolic process | 1.63E-03 |
| 36 | GO:0006913: nucleocytoplasmic transport | 1.79E-03 |
| 37 | GO:0000272: polysaccharide catabolic process | 1.79E-03 |
| 38 | GO:0071365: cellular response to auxin stimulus | 1.96E-03 |
| 39 | GO:0005975: carbohydrate metabolic process | 2.19E-03 |
| 40 | GO:0046686: response to cadmium ion | 2.27E-03 |
| 41 | GO:0002237: response to molecule of bacterial origin | 2.32E-03 |
| 42 | GO:0042343: indole glucosinolate metabolic process | 2.50E-03 |
| 43 | GO:0019853: L-ascorbic acid biosynthetic process | 2.50E-03 |
| 44 | GO:0042744: hydrogen peroxide catabolic process | 2.54E-03 |
| 45 | GO:0009611: response to wounding | 2.60E-03 |
| 46 | GO:0000162: tryptophan biosynthetic process | 2.69E-03 |
| 47 | GO:0006874: cellular calcium ion homeostasis | 3.08E-03 |
| 48 | GO:0048511: rhythmic process | 3.29E-03 |
| 49 | GO:0098542: defense response to other organism | 3.29E-03 |
| 50 | GO:0016998: cell wall macromolecule catabolic process | 3.29E-03 |
| 51 | GO:0030245: cellulose catabolic process | 3.50E-03 |
| 52 | GO:0010017: red or far-red light signaling pathway | 3.50E-03 |
| 53 | GO:0010089: xylem development | 3.93E-03 |
| 54 | GO:0009561: megagametogenesis | 3.93E-03 |
| 55 | GO:0006817: phosphate ion transport | 3.93E-03 |
| 56 | GO:0008284: positive regulation of cell proliferation | 4.15E-03 |
| 57 | GO:0042631: cellular response to water deprivation | 4.37E-03 |
| 58 | GO:0006885: regulation of pH | 4.60E-03 |
| 59 | GO:0009646: response to absence of light | 4.83E-03 |
| 60 | GO:0006623: protein targeting to vacuole | 5.07E-03 |
| 61 | GO:1901657: glycosyl compound metabolic process | 5.81E-03 |
| 62 | GO:0030163: protein catabolic process | 5.81E-03 |
| 63 | GO:0046777: protein autophosphorylation | 6.26E-03 |
| 64 | GO:0009615: response to virus | 6.85E-03 |
| 65 | GO:0009651: response to salt stress | 7.28E-03 |
| 66 | GO:0016311: dephosphorylation | 7.96E-03 |
| 67 | GO:0007568: aging | 9.12E-03 |
| 68 | GO:0010043: response to zinc ion | 9.12E-03 |
| 69 | GO:0009753: response to jasmonic acid | 9.26E-03 |
| 70 | GO:0051707: response to other organism | 1.16E-02 |
| 71 | GO:0009744: response to sucrose | 1.16E-02 |
| 72 | GO:0006812: cation transport | 1.37E-02 |
| 73 | GO:0006486: protein glycosylation | 1.44E-02 |
| 74 | GO:0006813: potassium ion transport | 1.44E-02 |
| 75 | GO:0009416: response to light stimulus | 1.54E-02 |
| 76 | GO:0042545: cell wall modification | 1.80E-02 |
| 77 | GO:0006355: regulation of transcription, DNA-templated | 1.84E-02 |
| 78 | GO:0045490: pectin catabolic process | 2.72E-02 |
| 79 | GO:0006470: protein dephosphorylation | 2.99E-02 |
| 80 | GO:0009617: response to bacterium | 3.08E-02 |
| 81 | GO:0071555: cell wall organization | 3.12E-02 |
| 82 | GO:0006979: response to oxidative stress | 3.14E-02 |
| 83 | GO:0030154: cell differentiation | 3.39E-02 |
| 84 | GO:0006351: transcription, DNA-templated | 3.99E-02 |
| 85 | GO:0009723: response to ethylene | 4.12E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003796: lysozyme activity | 0.00E+00 |
| 2 | GO:0020037: heme binding | 7.84E-06 |
| 3 | GO:0016844: strictosidine synthase activity | 3.83E-05 |
| 4 | GO:0046906: tetrapyrrole binding | 5.03E-05 |
| 5 | GO:0004048: anthranilate phosphoribosyltransferase activity | 5.03E-05 |
| 6 | GO:0047782: coniferin beta-glucosidase activity | 5.03E-05 |
| 7 | GO:0004476: mannose-6-phosphate isomerase activity | 5.03E-05 |
| 8 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.23E-04 |
| 9 | GO:0019172: glyoxalase III activity | 1.23E-04 |
| 10 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.25E-04 |
| 11 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 2.11E-04 |
| 12 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.15E-04 |
| 13 | GO:0005496: steroid binding | 5.26E-04 |
| 14 | GO:0004721: phosphoprotein phosphatase activity | 5.46E-04 |
| 15 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 6.15E-04 |
| 16 | GO:0019825: oxygen binding | 6.90E-04 |
| 17 | GO:0004497: monooxygenase activity | 7.65E-04 |
| 18 | GO:0008422: beta-glucosidase activity | 8.22E-04 |
| 19 | GO:0043565: sequence-specific DNA binding | 9.44E-04 |
| 20 | GO:0005506: iron ion binding | 1.14E-03 |
| 21 | GO:0071949: FAD binding | 1.32E-03 |
| 22 | GO:0004568: chitinase activity | 1.63E-03 |
| 23 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.30E-03 |
| 24 | GO:0008083: growth factor activity | 2.32E-03 |
| 25 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.32E-03 |
| 26 | GO:0005217: intracellular ligand-gated ion channel activity | 2.50E-03 |
| 27 | GO:0004970: ionotropic glutamate receptor activity | 2.50E-03 |
| 28 | GO:0004190: aspartic-type endopeptidase activity | 2.50E-03 |
| 29 | GO:0004725: protein tyrosine phosphatase activity | 2.69E-03 |
| 30 | GO:0008134: transcription factor binding | 2.88E-03 |
| 31 | GO:0008810: cellulase activity | 3.71E-03 |
| 32 | GO:0005451: monovalent cation:proton antiporter activity | 4.37E-03 |
| 33 | GO:0005199: structural constituent of cell wall | 4.60E-03 |
| 34 | GO:0004601: peroxidase activity | 4.73E-03 |
| 35 | GO:0015299: solute:proton antiporter activity | 4.83E-03 |
| 36 | GO:0010181: FMN binding | 4.83E-03 |
| 37 | GO:0015385: sodium:proton antiporter activity | 5.81E-03 |
| 38 | GO:0016791: phosphatase activity | 6.07E-03 |
| 39 | GO:0016597: amino acid binding | 6.59E-03 |
| 40 | GO:0102483: scopolin beta-glucosidase activity | 7.68E-03 |
| 41 | GO:0030145: manganese ion binding | 9.12E-03 |
| 42 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 9.12E-03 |
| 43 | GO:0009055: electron carrier activity | 9.26E-03 |
| 44 | GO:0051287: NAD binding | 1.33E-02 |
| 45 | GO:0045330: aspartyl esterase activity | 1.54E-02 |
| 46 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.58E-02 |
| 47 | GO:0045735: nutrient reservoir activity | 1.62E-02 |
| 48 | GO:0030599: pectinesterase activity | 1.77E-02 |
| 49 | GO:0015035: protein disulfide oxidoreductase activity | 1.88E-02 |
| 50 | GO:0005507: copper ion binding | 2.19E-02 |
| 51 | GO:0046910: pectinesterase inhibitor activity | 2.59E-02 |
| 52 | GO:0044212: transcription regulatory region DNA binding | 3.12E-02 |
| 53 | GO:0016788: hydrolase activity, acting on ester bonds | 3.76E-02 |
| 54 | GO:0050660: flavin adenine dinucleotide binding | 4.12E-02 |
| 55 | GO:0046872: metal ion binding | 4.22E-02 |
| 56 | GO:0004672: protein kinase activity | 4.56E-02 |
| 57 | GO:0052689: carboxylic ester hydrolase activity | 4.64E-02 |
| 58 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005576: extracellular region | 1.86E-04 |
| 2 | GO:0005615: extracellular space | 3.88E-04 |
| 3 | GO:0005618: cell wall | 2.35E-03 |
| 4 | GO:0030176: integral component of endoplasmic reticulum membrane | 2.50E-03 |
| 5 | GO:0005770: late endosome | 4.60E-03 |
| 6 | GO:0031965: nuclear membrane | 5.07E-03 |
| 7 | GO:0071944: cell periphery | 5.81E-03 |
| 8 | GO:0005774: vacuolar membrane | 7.63E-03 |
| 9 | GO:0000325: plant-type vacuole | 9.12E-03 |
| 10 | GO:0005773: vacuole | 1.46E-02 |
| 11 | GO:0005635: nuclear envelope | 1.51E-02 |
| 12 | GO:0016607: nuclear speck | 1.65E-02 |
| 13 | GO:0009506: plasmodesma | 1.91E-02 |
| 14 | GO:0005783: endoplasmic reticulum | 2.19E-02 |
| 15 | GO:0048046: apoplast | 3.16E-02 |
| 16 | GO:0046658: anchored component of plasma membrane | 3.32E-02 |
| 17 | GO:0016020: membrane | 3.62E-02 |
| 18 | GO:0009536: plastid | 3.82E-02 |
| 19 | GO:0009505: plant-type cell wall | 3.90E-02 |
| 20 | GO:0005829: cytosol | 4.40E-02 |