co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G39670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
2	GO:0033358: UDP-L-arabinose biosynthetic process	2.14E-06
3	GO:0045227: capsule polysaccharide biosynthetic process	2.14E-06
4	GO:0019567: arabinose biosynthetic process	4.31E-05
5	GO:0010482: regulation of epidermal cell division	4.31E-05
6	GO:1900384: regulation of flavonol biosynthetic process	4.31E-05
7	GO:0009225: nucleotide-sugar metabolic process	7.88E-05
8	GO:0046939: nucleotide phosphorylation	1.07E-04
9	GO:0006012: galactose metabolic process	1.51E-04
10	GO:0010447: response to acidic pH	1.84E-04
11	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	1.84E-04
12	GO:0051567: histone H3-K9 methylation	3.64E-04
13	GO:0032957: inositol trisphosphate metabolic process	4.63E-04
14	GO:0030041: actin filament polymerization	4.63E-04
15	GO:0048317: seed morphogenesis	5.67E-04
16	GO:0046855: inositol phosphate dephosphorylation	5.67E-04
17	GO:0009643: photosynthetic acclimation	5.67E-04
18	GO:0010200: response to chitin	6.22E-04
19	GO:0031930: mitochondria-nucleus signaling pathway	6.76E-04
20	GO:1900056: negative regulation of leaf senescence	7.90E-04
21	GO:0080186: developmental vegetative growth	7.90E-04
22	GO:0010044: response to aluminum ion	7.90E-04
23	GO:0045010: actin nucleation	9.08E-04
24	GO:0009699: phenylpropanoid biosynthetic process	1.03E-03
25	GO:0008152: metabolic process	1.09E-03
26	GO:0009835: fruit ripening	1.16E-03
27	GO:0007064: mitotic sister chromatid cohesion	1.43E-03
28	GO:0046856: phosphatidylinositol dephosphorylation	1.57E-03
29	GO:0048765: root hair cell differentiation	1.57E-03
30	GO:2000028: regulation of photoperiodism, flowering	1.87E-03
31	GO:0009611: response to wounding	2.02E-03
32	GO:0006446: regulation of translational initiation	2.03E-03
33	GO:0090351: seedling development	2.19E-03
34	GO:0016036: cellular response to phosphate starvation	2.36E-03
35	GO:0045333: cellular respiration	2.52E-03
36	GO:0010026: trichome differentiation	2.70E-03
37	GO:0009693: ethylene biosynthetic process	3.24E-03
38	GO:0009960: endosperm development	4.02E-03
39	GO:0048868: pollen tube development	4.02E-03
40	GO:0016579: protein deubiquitination	5.75E-03
41	GO:0001666: response to hypoxia	5.98E-03
42	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	6.21E-03
43	GO:0009751: response to salicylic acid	6.98E-03
44	GO:0009832: plant-type cell wall biogenesis	7.43E-03
45	GO:0009407: toxin catabolic process	7.69E-03
46	GO:0009631: cold acclimation	7.95E-03
47	GO:0006839: mitochondrial transport	9.28E-03
48	GO:0006357: regulation of transcription from RNA polymerase II promoter	9.37E-03
49	GO:0009636: response to toxic substance	1.10E-02
50	GO:0006355: regulation of transcription, DNA-templated	1.10E-02
51	GO:0007275: multicellular organism development	1.13E-02
52	GO:0042538: hyperosmotic salinity response	1.19E-02
53	GO:0009737: response to abscisic acid	1.25E-02
54	GO:0010224: response to UV-B	1.28E-02
55	GO:0009845: seed germination	1.99E-02
56	GO:0009651: response to salt stress	2.22E-02
57	GO:0006413: translational initiation	2.25E-02
58	GO:0009414: response to water deprivation	2.50E-02
59	GO:0006979: response to oxidative stress	2.58E-02
60	GO:0006470: protein dephosphorylation	2.60E-02
61	GO:0006351: transcription, DNA-templated	2.63E-02
62	GO:0010468: regulation of gene expression	2.68E-02
63	GO:0030154: cell differentiation	2.78E-02
64	GO:0009409: response to cold	3.46E-02
65	GO:0009723: response to ethylene	3.58E-02
66	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.85E-02
67	GO:0016192: vesicle-mediated transport	3.89E-02
68	GO:0046686: response to cadmium ion	3.97E-02
69	GO:0045892: negative regulation of transcription, DNA-templated	4.32E-02
70	GO:0009408: response to heat	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0050373: UDP-arabinose 4-epimerase activity	2.14E-06
2	GO:0003978: UDP-glucose 4-epimerase activity	8.18E-06
3	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	1.07E-04
4	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	1.07E-04
5	GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	1.84E-04
6	GO:0019201: nucleotide kinase activity	2.70E-04
7	GO:0004445: inositol-polyphosphate 5-phosphatase activity	2.70E-04
8	GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity	2.70E-04
9	GO:0009916: alternative oxidase activity	3.64E-04
10	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	5.67E-04
11	GO:0004017: adenylate kinase activity	6.76E-04
12	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	9.08E-04
13	GO:0016207: 4-coumarate-CoA ligase activity	1.16E-03
14	GO:0015020: glucuronosyltransferase activity	1.43E-03
15	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.72E-03
16	GO:0016758: transferase activity, transferring hexosyl groups	1.79E-03
17	GO:0001046: core promoter sequence-specific DNA binding	2.52E-03
18	GO:0043565: sequence-specific DNA binding	2.57E-03
19	GO:0008194: UDP-glycosyltransferase activity	2.82E-03
20	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.88E-03
21	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.65E-03
22	GO:0019901: protein kinase binding	4.43E-03
23	GO:0004843: thiol-dependent ubiquitin-specific protease activity	4.64E-03
24	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	5.52E-03
25	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	5.75E-03
26	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	6.39E-03
27	GO:0004222: metalloendopeptidase activity	7.69E-03
28	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	7.95E-03
29	GO:0004364: glutathione transferase activity	9.83E-03
30	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.50E-02
31	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.50E-02
32	GO:0016874: ligase activity	1.54E-02
33	GO:0003779: actin binding	1.57E-02
34	GO:0005516: calmodulin binding	1.90E-02
35	GO:0030170: pyridoxal phosphate binding	2.02E-02
36	GO:0005525: GTP binding	2.08E-02
37	GO:0044212: transcription regulatory region DNA binding	2.56E-02
38	GO:0003743: translation initiation factor activity	2.64E-02
39	GO:0003824: catalytic activity	2.81E-02
40	GO:0003682: chromatin binding	3.35E-02
41	GO:0050660: flavin adenine dinucleotide binding	3.58E-02
42	GO:0004674: protein serine/threonine kinase activity	3.59E-02
43	GO:0004871: signal transducer activity	4.41E-02
44	GO:0004722: protein serine/threonine phosphatase activity	4.56E-02
45	GO:0003924: GTPase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0032580: Golgi cisterna membrane	3.21E-04
2	GO:0090404: pollen tube tip	1.57E-03
3	GO:0031012: extracellular matrix	1.87E-03
4	GO:0070469: respiratory chain	2.70E-03
5	GO:0005743: mitochondrial inner membrane	6.58E-03
6	GO:0031966: mitochondrial membrane	1.19E-02
7	GO:0010008: endosome membrane	1.44E-02
8	GO:0005834: heterotrimeric G-protein complex	1.47E-02
9	GO:0009524: phragmoplast	1.95E-02
10	GO:0005634: nucleus	2.07E-02