Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G39460

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
2GO:0010270: photosystem II oxygen evolving complex assembly2.63E-06
3GO:0006424: glutamyl-tRNA aminoacylation8.12E-06
4GO:0032543: mitochondrial translation1.59E-05
5GO:0006828: manganese ion transport2.06E-05
6GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.57E-05
7GO:0006816: calcium ion transport7.14E-05
8GO:0006412: translation7.20E-05
9GO:0042254: ribosome biogenesis1.41E-03
10GO:0045454: cell redox homeostasis1.81E-03
11GO:0009735: response to cytokinin2.89E-03
12GO:0006508: proteolysis1.09E-02
RankGO TermAdjusted P value
1GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity9.19E-07
2GO:0019843: rRNA binding1.24E-05
3GO:0003735: structural constituent of ribosome1.59E-05
4GO:0051920: peroxiredoxin activity2.57E-05
5GO:0016209: antioxidant activity3.71E-05
6GO:0005384: manganese ion transmembrane transporter activity5.67E-05
7GO:0015095: magnesium ion transmembrane transporter activity8.72E-05
8GO:0008237: metallopeptidase activity2.73E-04
9GO:0004222: metalloendopeptidase activity3.77E-04
10GO:0004601: peroxidase activity1.40E-03
11GO:0016740: transferase activity3.51E-03
12GO:0016491: oxidoreductase activity6.01E-03
RankGO TermAdjusted P value
1GO:0009507: chloroplast0.00E+00
2GO:0000311: plastid large ribosomal subunit1.19E-07
3GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex9.19E-07
4GO:0009941: chloroplast envelope1.12E-06
5GO:0009570: chloroplast stroma2.32E-06
6GO:0009535: chloroplast thylakoid membrane1.93E-05
7GO:0009533: chloroplast stromal thylakoid3.12E-05
8GO:0031969: chloroplast membrane4.05E-05
9GO:0000312: plastid small ribosomal subunit9.53E-05
10GO:0010287: plastoglobule8.29E-04
11GO:0009543: chloroplast thylakoid lumen8.59E-04
12GO:0022627: cytosolic small ribosomal subunit1.26E-03
13GO:0009534: chloroplast thylakoid3.49E-03
14GO:0005840: ribosome5.13E-03
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Gene type



Gene DE type