GO Enrichment Analysis of Co-expressed Genes with
AT4G39240
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080184: response to phenylpropanoid | 0.00E+00 |
| 2 | GO:0045905: positive regulation of translational termination | 1.07E-04 |
| 3 | GO:0045901: positive regulation of translational elongation | 1.07E-04 |
| 4 | GO:0006452: translational frameshifting | 1.07E-04 |
| 5 | GO:0034227: tRNA thio-modification | 1.84E-04 |
| 6 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 2.70E-04 |
| 7 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 2.70E-04 |
| 8 | GO:1901332: negative regulation of lateral root development | 2.70E-04 |
| 9 | GO:0006168: adenine salvage | 2.70E-04 |
| 10 | GO:0006166: purine ribonucleoside salvage | 2.70E-04 |
| 11 | GO:0006107: oxaloacetate metabolic process | 2.70E-04 |
| 12 | GO:0010387: COP9 signalosome assembly | 3.64E-04 |
| 13 | GO:0044209: AMP salvage | 4.63E-04 |
| 14 | GO:0002238: response to molecule of fungal origin | 5.67E-04 |
| 15 | GO:0001731: formation of translation preinitiation complex | 5.67E-04 |
| 16 | GO:0009853: photorespiration | 6.25E-04 |
| 17 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 6.76E-04 |
| 18 | GO:0000338: protein deneddylation | 7.90E-04 |
| 19 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 9.08E-04 |
| 20 | GO:0006506: GPI anchor biosynthetic process | 9.08E-04 |
| 21 | GO:0009690: cytokinin metabolic process | 9.08E-04 |
| 22 | GO:0006855: drug transmembrane transport | 9.22E-04 |
| 23 | GO:0010100: negative regulation of photomorphogenesis | 1.03E-03 |
| 24 | GO:0010093: specification of floral organ identity | 1.03E-03 |
| 25 | GO:0015996: chlorophyll catabolic process | 1.03E-03 |
| 26 | GO:0000103: sulfate assimilation | 1.43E-03 |
| 27 | GO:0043069: negative regulation of programmed cell death | 1.43E-03 |
| 28 | GO:0016925: protein sumoylation | 1.72E-03 |
| 29 | GO:0006807: nitrogen compound metabolic process | 1.87E-03 |
| 30 | GO:0006108: malate metabolic process | 1.87E-03 |
| 31 | GO:0006446: regulation of translational initiation | 2.03E-03 |
| 32 | GO:0006487: protein N-linked glycosylation | 2.52E-03 |
| 33 | GO:0009116: nucleoside metabolic process | 2.52E-03 |
| 34 | GO:0061077: chaperone-mediated protein folding | 2.88E-03 |
| 35 | GO:0010089: xylem development | 3.43E-03 |
| 36 | GO:0010118: stomatal movement | 3.82E-03 |
| 37 | GO:0015991: ATP hydrolysis coupled proton transport | 3.82E-03 |
| 38 | GO:0006662: glycerol ether metabolic process | 4.02E-03 |
| 39 | GO:0080156: mitochondrial mRNA modification | 4.64E-03 |
| 40 | GO:0006914: autophagy | 5.30E-03 |
| 41 | GO:0010286: heat acclimation | 5.52E-03 |
| 42 | GO:0009607: response to biotic stimulus | 6.21E-03 |
| 43 | GO:0015031: protein transport | 6.50E-03 |
| 44 | GO:0006950: response to stress | 6.69E-03 |
| 45 | GO:0016042: lipid catabolic process | 6.88E-03 |
| 46 | GO:0010311: lateral root formation | 7.43E-03 |
| 47 | GO:0006499: N-terminal protein myristoylation | 7.69E-03 |
| 48 | GO:0010043: response to zinc ion | 7.95E-03 |
| 49 | GO:0006865: amino acid transport | 8.21E-03 |
| 50 | GO:0034599: cellular response to oxidative stress | 8.74E-03 |
| 51 | GO:0009640: photomorphogenesis | 1.01E-02 |
| 52 | GO:0031347: regulation of defense response | 1.16E-02 |
| 53 | GO:0009809: lignin biosynthetic process | 1.25E-02 |
| 54 | GO:0009585: red, far-red light phototransduction | 1.25E-02 |
| 55 | GO:0009624: response to nematode | 1.60E-02 |
| 56 | GO:0055114: oxidation-reduction process | 2.08E-02 |
| 57 | GO:0006413: translational initiation | 2.25E-02 |
| 58 | GO:0007623: circadian rhythm | 2.36E-02 |
| 59 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.44E-02 |
| 60 | GO:0009733: response to auxin | 2.87E-02 |
| 61 | GO:0042254: ribosome biogenesis | 3.27E-02 |
| 62 | GO:0006810: transport | 3.75E-02 |
| 63 | GO:0080167: response to karrikin | 3.76E-02 |
| 64 | GO:0016192: vesicle-mediated transport | 3.89E-02 |
| 65 | GO:0045454: cell redox homeostasis | 4.27E-02 |
| 66 | GO:0045892: negative regulation of transcription, DNA-templated | 4.32E-02 |
| 67 | GO:0006886: intracellular protein transport | 4.37E-02 |
| 68 | GO:0009408: response to heat | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050152: omega-amidase activity | 0.00E+00 |
| 2 | GO:0102293: pheophytinase b activity | 4.31E-05 |
| 3 | GO:0008517: folic acid transporter activity | 1.07E-04 |
| 4 | GO:0047746: chlorophyllase activity | 1.07E-04 |
| 5 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 2.64E-04 |
| 6 | GO:0003999: adenine phosphoribosyltransferase activity | 2.70E-04 |
| 7 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 3.64E-04 |
| 8 | GO:0004576: oligosaccharyl transferase activity | 3.64E-04 |
| 9 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 4.63E-04 |
| 10 | GO:0031386: protein tag | 4.63E-04 |
| 11 | GO:0004656: procollagen-proline 4-dioxygenase activity | 6.76E-04 |
| 12 | GO:0008320: protein transmembrane transporter activity | 7.90E-04 |
| 13 | GO:0052747: sinapyl alcohol dehydrogenase activity | 9.08E-04 |
| 14 | GO:0043022: ribosome binding | 9.08E-04 |
| 15 | GO:0015078: hydrogen ion transmembrane transporter activity | 1.03E-03 |
| 16 | GO:0004129: cytochrome-c oxidase activity | 1.57E-03 |
| 17 | GO:0008559: xenobiotic-transporting ATPase activity | 1.57E-03 |
| 18 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 1.72E-03 |
| 19 | GO:0005528: FK506 binding | 2.52E-03 |
| 20 | GO:0031418: L-ascorbic acid binding | 2.52E-03 |
| 21 | GO:0003743: translation initiation factor activity | 2.94E-03 |
| 22 | GO:0005507: copper ion binding | 3.07E-03 |
| 23 | GO:0047134: protein-disulfide reductase activity | 3.63E-03 |
| 24 | GO:0016788: hydrolase activity, acting on ester bonds | 3.95E-03 |
| 25 | GO:0004791: thioredoxin-disulfide reductase activity | 4.23E-03 |
| 26 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.07E-03 |
| 27 | GO:0052689: carboxylic ester hydrolase activity | 5.31E-03 |
| 28 | GO:0008237: metallopeptidase activity | 5.52E-03 |
| 29 | GO:0015238: drug transmembrane transporter activity | 7.43E-03 |
| 30 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 8.47E-03 |
| 31 | GO:0003746: translation elongation factor activity | 8.47E-03 |
| 32 | GO:0003697: single-stranded DNA binding | 8.47E-03 |
| 33 | GO:0051539: 4 iron, 4 sulfur cluster binding | 9.28E-03 |
| 34 | GO:0043621: protein self-association | 1.07E-02 |
| 35 | GO:0016887: ATPase activity | 1.10E-02 |
| 36 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.13E-02 |
| 37 | GO:0016298: lipase activity | 1.28E-02 |
| 38 | GO:0015171: amino acid transmembrane transporter activity | 1.34E-02 |
| 39 | GO:0022857: transmembrane transporter activity | 1.54E-02 |
| 40 | GO:0015035: protein disulfide oxidoreductase activity | 1.64E-02 |
| 41 | GO:0008565: protein transporter activity | 2.13E-02 |
| 42 | GO:0015297: antiporter activity | 2.29E-02 |
| 43 | GO:0008017: microtubule binding | 2.44E-02 |
| 44 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.80E-02 |
| 45 | GO:0003729: mRNA binding | 3.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005747: mitochondrial respiratory chain complex I | 3.44E-06 |
| 2 | GO:0045271: respiratory chain complex I | 1.12E-04 |
| 3 | GO:0005838: proteasome regulatory particle | 1.84E-04 |
| 4 | GO:0033179: proton-transporting V-type ATPase, V0 domain | 3.64E-04 |
| 5 | GO:0008250: oligosaccharyltransferase complex | 4.63E-04 |
| 6 | GO:0016282: eukaryotic 43S preinitiation complex | 5.67E-04 |
| 7 | GO:0033290: eukaryotic 48S preinitiation complex | 6.76E-04 |
| 8 | GO:0005773: vacuole | 6.78E-04 |
| 9 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 7.90E-04 |
| 10 | GO:0000421: autophagosome membrane | 9.08E-04 |
| 11 | GO:0031966: mitochondrial membrane | 9.88E-04 |
| 12 | GO:0008180: COP9 signalosome | 1.16E-03 |
| 13 | GO:0005740: mitochondrial envelope | 1.43E-03 |
| 14 | GO:0005829: cytosol | 1.61E-03 |
| 15 | GO:0005789: endoplasmic reticulum membrane | 1.62E-03 |
| 16 | GO:0005750: mitochondrial respiratory chain complex III | 2.03E-03 |
| 17 | GO:0005758: mitochondrial intermembrane space | 2.52E-03 |
| 18 | GO:0031410: cytoplasmic vesicle | 3.06E-03 |
| 19 | GO:0032580: Golgi cisterna membrane | 5.30E-03 |
| 20 | GO:0005788: endoplasmic reticulum lumen | 6.21E-03 |
| 21 | GO:0000325: plant-type vacuole | 7.95E-03 |
| 22 | GO:0009543: chloroplast thylakoid lumen | 1.88E-02 |
| 23 | GO:0016020: membrane | 2.38E-02 |
| 24 | GO:0005840: ribosome | 2.68E-02 |
| 25 | GO:0022627: cytosolic small ribosomal subunit | 2.88E-02 |
| 26 | GO:0016021: integral component of membrane | 3.14E-02 |
| 27 | GO:0005874: microtubule | 3.67E-02 |
| 28 | GO:0031969: chloroplast membrane | 3.76E-02 |
| 29 | GO:0022625: cytosolic large ribosomal subunit | 3.89E-02 |
| 30 | GO:0005737: cytoplasm | 4.92E-02 |