co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G39210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045747: positive regulation of Notch signaling pathway	0.00E+00
2	GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine	0.00E+00
3	GO:0046294: formaldehyde catabolic process	0.00E+00
4	GO:0016093: polyprenol metabolic process	0.00E+00
5	GO:0019343: cysteine biosynthetic process via cystathionine	1.13E-05
6	GO:0071266: 'de novo' L-methionine biosynthetic process	1.13E-05
7	GO:0019346: transsulfuration	1.13E-05
8	GO:0080183: response to photooxidative stress	3.00E-05
9	GO:2000030: regulation of response to red or far red light	3.00E-05
10	GO:1901562: response to paraquat	5.40E-05
11	GO:0006013: mannose metabolic process	5.40E-05
12	GO:0034613: cellular protein localization	1.14E-04
13	GO:0006221: pyrimidine nucleotide biosynthetic process	1.14E-04
14	GO:0015996: chlorophyll catabolic process	3.52E-04
15	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	3.52E-04
16	GO:0009880: embryonic pattern specification	3.52E-04
17	GO:0006879: cellular iron ion homeostasis	5.39E-04
18	GO:0006487: protein N-linked glycosylation	8.54E-04
19	GO:0016226: iron-sulfur cluster assembly	1.02E-03
20	GO:0010051: xylem and phloem pattern formation	1.26E-03
21	GO:0008360: regulation of cell shape	1.33E-03
22	GO:0006486: protein glycosylation	3.95E-03
23	GO:0051603: proteolysis involved in cellular protein catabolic process	4.05E-03
24	GO:0007049: cell cycle	1.08E-02
25	GO:0045892: negative regulation of transcription, DNA-templated	1.33E-02
26	GO:0006629: lipid metabolic process	1.53E-02
27	GO:0048364: root development	1.57E-02
28	GO:0009734: auxin-activated signaling pathway	1.95E-02
29	GO:0071555: cell wall organization	3.80E-02
30	GO:0009733: response to auxin	4.12E-02
31	GO:0055114: oxidation-reduction process	4.23E-02
32	GO:0009409: response to cold	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
2	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.15E-07
3	GO:0004123: cystathionine gamma-lyase activity	1.13E-05
4	GO:0004121: cystathionine beta-lyase activity	1.13E-05
5	GO:0019172: glyoxalase III activity	3.00E-05
6	GO:0003962: cystathionine gamma-synthase activity	5.40E-05
7	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	1.86E-04
8	GO:0004559: alpha-mannosidase activity	2.25E-04
9	GO:0003843: 1,3-beta-D-glucan synthase activity	3.52E-04
10	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	3.97E-04
11	GO:0051539: 4 iron, 4 sulfur cluster binding	2.97E-03
12	GO:0004185: serine-type carboxypeptidase activity	3.23E-03
13	GO:0016746: transferase activity, transferring acyl groups	5.13E-03
14	GO:0030170: pyridoxal phosphate binding	6.31E-03
15	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	8.67E-03
16	GO:0016788: hydrolase activity, acting on ester bonds	1.01E-02
17	GO:0052689: carboxylic ester hydrolase activity	1.24E-02
18	GO:0030246: carbohydrate binding	2.84E-02
19	GO:0003824: catalytic activity	4.06E-02
20	GO:0005215: transporter activity	4.08E-02
21	GO:0016491: oxidoreductase activity	4.62E-02
22	GO:0004672: protein kinase activity	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0010287: plastoglobule	3.51E-04
2	GO:0000148: 1,3-beta-D-glucan synthase complex	3.52E-04
3	GO:0005765: lysosomal membrane	5.39E-04
4	GO:0005875: microtubule associated complex	7.99E-04
5	GO:0009507: chloroplast	1.14E-03
6	GO:0009504: cell plate	1.46E-03
7	GO:0009505: plant-type cell wall	5.98E-03
8	GO:0009570: chloroplast stroma	6.06E-03
9	GO:0005789: endoplasmic reticulum membrane	7.29E-03
10	GO:0005774: vacuolar membrane	1.66E-02
11	GO:0048046: apoplast	1.74E-02
12	GO:0005773: vacuole	2.55E-02
13	GO:0005783: endoplasmic reticulum	3.35E-02
14	GO:0009536: plastid	4.39E-02