GO Enrichment Analysis of Co-expressed Genes with
AT4G39200
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 2 | GO:0007530: sex determination | 0.00E+00 |
| 3 | GO:0006412: translation | 2.29E-166 |
| 4 | GO:0042254: ribosome biogenesis | 6.34E-69 |
| 5 | GO:0000027: ribosomal large subunit assembly | 2.34E-13 |
| 6 | GO:0000028: ribosomal small subunit assembly | 1.09E-07 |
| 7 | GO:0009955: adaxial/abaxial pattern specification | 3.96E-06 |
| 8 | GO:1902626: assembly of large subunit precursor of preribosome | 1.69E-05 |
| 9 | GO:0002181: cytoplasmic translation | 1.69E-05 |
| 10 | GO:0000387: spliceosomal snRNP assembly | 2.56E-05 |
| 11 | GO:0006626: protein targeting to mitochondrion | 6.51E-05 |
| 12 | GO:0000398: mRNA splicing, via spliceosome | 1.52E-04 |
| 13 | GO:0006407: rRNA export from nucleus | 3.24E-04 |
| 14 | GO:0015801: aromatic amino acid transport | 3.24E-04 |
| 15 | GO:0030490: maturation of SSU-rRNA | 3.24E-04 |
| 16 | GO:2001006: regulation of cellulose biosynthetic process | 3.24E-04 |
| 17 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.24E-04 |
| 18 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.24E-04 |
| 19 | GO:0009735: response to cytokinin | 3.53E-04 |
| 20 | GO:0009245: lipid A biosynthetic process | 5.01E-04 |
| 21 | GO:0071668: plant-type cell wall assembly | 7.07E-04 |
| 22 | GO:0048569: post-embryonic animal organ development | 7.07E-04 |
| 23 | GO:0006414: translational elongation | 1.05E-03 |
| 24 | GO:0009150: purine ribonucleotide metabolic process | 1.15E-03 |
| 25 | GO:0042256: mature ribosome assembly | 1.15E-03 |
| 26 | GO:0070301: cellular response to hydrogen peroxide | 1.65E-03 |
| 27 | GO:0006241: CTP biosynthetic process | 1.65E-03 |
| 28 | GO:0006165: nucleoside diphosphate phosphorylation | 1.65E-03 |
| 29 | GO:0006228: UTP biosynthetic process | 1.65E-03 |
| 30 | GO:0009793: embryo development ending in seed dormancy | 1.70E-03 |
| 31 | GO:0009965: leaf morphogenesis | 2.17E-03 |
| 32 | GO:0042274: ribosomal small subunit biogenesis | 2.21E-03 |
| 33 | GO:0010387: COP9 signalosome assembly | 2.21E-03 |
| 34 | GO:0006183: GTP biosynthetic process | 2.21E-03 |
| 35 | GO:0045040: protein import into mitochondrial outer membrane | 3.49E-03 |
| 36 | GO:0000470: maturation of LSU-rRNA | 3.49E-03 |
| 37 | GO:0043248: proteasome assembly | 3.49E-03 |
| 38 | GO:0000911: cytokinesis by cell plate formation | 4.20E-03 |
| 39 | GO:0009651: response to salt stress | 4.40E-03 |
| 40 | GO:0000338: protein deneddylation | 4.95E-03 |
| 41 | GO:0009808: lignin metabolic process | 6.60E-03 |
| 42 | GO:0048589: developmental growth | 7.48E-03 |
| 43 | GO:0098656: anion transmembrane transport | 7.48E-03 |
| 44 | GO:0010015: root morphogenesis | 1.04E-02 |
| 45 | GO:0006913: nucleocytoplasmic transport | 1.04E-02 |
| 46 | GO:0006790: sulfur compound metabolic process | 1.14E-02 |
| 47 | GO:0006820: anion transport | 1.14E-02 |
| 48 | GO:0008283: cell proliferation | 1.21E-02 |
| 49 | GO:0010628: positive regulation of gene expression | 1.25E-02 |
| 50 | GO:0010102: lateral root morphogenesis | 1.25E-02 |
| 51 | GO:0009644: response to high light intensity | 1.31E-02 |
| 52 | GO:0006446: regulation of translational initiation | 1.36E-02 |
| 53 | GO:0048467: gynoecium development | 1.36E-02 |
| 54 | GO:0006406: mRNA export from nucleus | 1.72E-02 |
| 55 | GO:0030150: protein import into mitochondrial matrix | 1.72E-02 |
| 56 | GO:0003333: amino acid transmembrane transport | 1.97E-02 |
| 57 | GO:0007005: mitochondrion organization | 2.10E-02 |
| 58 | GO:0040007: growth | 2.23E-02 |
| 59 | GO:0000413: protein peptidyl-prolyl isomerization | 2.65E-02 |
| 60 | GO:0015031: protein transport | 2.96E-02 |
| 61 | GO:0010183: pollen tube guidance | 3.10E-02 |
| 62 | GO:0010090: trichome morphogenesis | 3.57E-02 |
| 63 | GO:0006633: fatty acid biosynthetic process | 3.65E-02 |
| 64 | GO:0006413: translational initiation | 3.74E-02 |
| 65 | GO:0008380: RNA splicing | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 5.49E-199 |
| 2 | GO:0003729: mRNA binding | 8.77E-40 |
| 3 | GO:0019843: rRNA binding | 1.53E-19 |
| 4 | GO:0008097: 5S rRNA binding | 3.75E-05 |
| 5 | GO:0031177: phosphopantetheine binding | 1.52E-04 |
| 6 | GO:0003746: translation elongation factor activity | 1.78E-04 |
| 7 | GO:0000035: acyl binding | 2.07E-04 |
| 8 | GO:0005080: protein kinase C binding | 3.24E-04 |
| 9 | GO:0035614: snRNA stem-loop binding | 3.24E-04 |
| 10 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 3.40E-04 |
| 11 | GO:0003723: RNA binding | 5.77E-04 |
| 12 | GO:0030619: U1 snRNA binding | 7.07E-04 |
| 13 | GO:0015173: aromatic amino acid transmembrane transporter activity | 7.07E-04 |
| 14 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.01E-03 |
| 15 | GO:0070180: large ribosomal subunit rRNA binding | 1.15E-03 |
| 16 | GO:0070181: small ribosomal subunit rRNA binding | 1.15E-03 |
| 17 | GO:0004550: nucleoside diphosphate kinase activity | 1.65E-03 |
| 18 | GO:0047627: adenylylsulfatase activity | 1.65E-03 |
| 19 | GO:0005275: amine transmembrane transporter activity | 2.82E-03 |
| 20 | GO:0051920: peroxiredoxin activity | 4.20E-03 |
| 21 | GO:0042162: telomeric DNA binding | 4.95E-03 |
| 22 | GO:0043022: ribosome binding | 5.76E-03 |
| 23 | GO:0015288: porin activity | 5.76E-03 |
| 24 | GO:0016209: antioxidant activity | 5.76E-03 |
| 25 | GO:0008308: voltage-gated anion channel activity | 6.60E-03 |
| 26 | GO:0001055: RNA polymerase II activity | 8.41E-03 |
| 27 | GO:0001054: RNA polymerase I activity | 1.04E-02 |
| 28 | GO:0044183: protein binding involved in protein folding | 1.04E-02 |
| 29 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.04E-02 |
| 30 | GO:0001056: RNA polymerase III activity | 1.14E-02 |
| 31 | GO:0015266: protein channel activity | 1.25E-02 |
| 32 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0005840: ribosome | 3.03E-139 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 4.57E-117 |
| 4 | GO:0022626: cytosolic ribosome | 1.34E-116 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 3.15E-84 |
| 6 | GO:0005737: cytoplasm | 2.46E-46 |
| 7 | GO:0005730: nucleolus | 1.10E-38 |
| 8 | GO:0005829: cytosol | 4.94E-38 |
| 9 | GO:0009506: plasmodesma | 5.03E-26 |
| 10 | GO:0015934: large ribosomal subunit | 5.83E-15 |
| 11 | GO:0005774: vacuolar membrane | 9.46E-15 |
| 12 | GO:0015935: small ribosomal subunit | 6.04E-13 |
| 13 | GO:0016020: membrane | 6.80E-13 |
| 14 | GO:0005773: vacuole | 2.25E-09 |
| 15 | GO:0005618: cell wall | 8.38E-09 |
| 16 | GO:0005853: eukaryotic translation elongation factor 1 complex | 3.73E-08 |
| 17 | GO:0005732: small nucleolar ribonucleoprotein complex | 9.27E-07 |
| 18 | GO:0005886: plasma membrane | 4.53E-06 |
| 19 | GO:0019013: viral nucleocapsid | 6.51E-05 |
| 20 | GO:0009507: chloroplast | 1.74E-04 |
| 21 | GO:0030686: 90S preribosome | 3.24E-04 |
| 22 | GO:0005685: U1 snRNP | 5.01E-04 |
| 23 | GO:0005681: spliceosomal complex | 5.72E-04 |
| 24 | GO:0071011: precatalytic spliceosome | 5.92E-04 |
| 25 | GO:0035145: exon-exon junction complex | 7.07E-04 |
| 26 | GO:0005697: telomerase holoenzyme complex | 7.07E-04 |
| 27 | GO:0071013: catalytic step 2 spliceosome | 7.96E-04 |
| 28 | GO:0005665: DNA-directed RNA polymerase II, core complex | 9.08E-04 |
| 29 | GO:0034719: SMN-Sm protein complex | 1.15E-03 |
| 30 | GO:0000419: DNA-directed RNA polymerase V complex | 1.44E-03 |
| 31 | GO:0005758: mitochondrial intermembrane space | 1.59E-03 |
| 32 | GO:1990726: Lsm1-7-Pat1 complex | 1.65E-03 |
| 33 | GO:0070469: respiratory chain | 1.76E-03 |
| 34 | GO:0005682: U5 snRNP | 2.21E-03 |
| 35 | GO:0005687: U4 snRNP | 2.82E-03 |
| 36 | GO:0097526: spliceosomal tri-snRNP complex | 2.82E-03 |
| 37 | GO:0005689: U12-type spliceosomal complex | 4.20E-03 |
| 38 | GO:0016272: prefoldin complex | 4.20E-03 |
| 39 | GO:0005762: mitochondrial large ribosomal subunit | 4.20E-03 |
| 40 | GO:0071004: U2-type prespliceosome | 5.76E-03 |
| 41 | GO:0005688: U6 snRNP | 5.76E-03 |
| 42 | GO:0046930: pore complex | 6.60E-03 |
| 43 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 6.60E-03 |
| 44 | GO:0005742: mitochondrial outer membrane translocase complex | 6.60E-03 |
| 45 | GO:0008180: COP9 signalosome | 7.48E-03 |
| 46 | GO:0005736: DNA-directed RNA polymerase I complex | 7.48E-03 |
| 47 | GO:0005666: DNA-directed RNA polymerase III complex | 8.41E-03 |
| 48 | GO:0015030: Cajal body | 8.41E-03 |
| 49 | GO:0005686: U2 snRNP | 9.37E-03 |
| 50 | GO:0000418: DNA-directed RNA polymerase IV complex | 9.37E-03 |
| 51 | GO:0048471: perinuclear region of cytoplasm | 1.04E-02 |
| 52 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.04E-02 |
| 53 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.04E-02 |
| 54 | GO:0031307: integral component of mitochondrial outer membrane | 1.14E-02 |
| 55 | GO:0009508: plastid chromosome | 1.25E-02 |
| 56 | GO:0005622: intracellular | 1.58E-02 |
| 57 | GO:0000502: proteasome complex | 1.63E-02 |
| 58 | GO:0005741: mitochondrial outer membrane | 1.97E-02 |
| 59 | GO:0005654: nucleoplasm | 2.83E-02 |
| 60 | GO:0005759: mitochondrial matrix | 3.65E-02 |
| 61 | GO:0009295: nucleoid | 3.89E-02 |
| 62 | GO:0030529: intracellular ribonucleoprotein complex | 4.23E-02 |
| 63 | GO:0000932: P-body | 4.23E-02 |