Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G38860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042493: response to drug0.00E+00
2GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.48E-06
3GO:0042371: vitamin K biosynthetic process6.91E-05
4GO:0009767: photosynthetic electron transport chain1.19E-04
5GO:0090307: mitotic spindle assembly4.06E-04
6GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center4.06E-04
7GO:0009650: UV protection4.06E-04
8GO:0031122: cytoplasmic microtubule organization5.42E-04
9GO:0009733: response to auxin5.43E-04
10GO:0055114: oxidation-reduction process5.82E-04
11GO:0016123: xanthophyll biosynthetic process6.87E-04
12GO:0000741: karyogamy8.40E-04
13GO:0006811: ion transport9.79E-04
14GO:0010189: vitamin E biosynthetic process9.99E-04
15GO:0080167: response to karrikin1.27E-03
16GO:0009744: response to sucrose1.42E-03
17GO:0009051: pentose-phosphate shunt, oxidative branch1.73E-03
18GO:0009585: red, far-red light phototransduction1.90E-03
19GO:0009638: phototropism1.93E-03
20GO:0009098: leucine biosynthetic process1.93E-03
21GO:0009641: shade avoidance2.14E-03
22GO:0009750: response to fructose2.36E-03
23GO:0006006: glucose metabolic process2.82E-03
24GO:0009725: response to hormone2.82E-03
25GO:0010223: secondary shoot formation3.06E-03
26GO:0080147: root hair cell development3.81E-03
27GO:0007017: microtubule-based process4.08E-03
28GO:0040008: regulation of growth4.41E-03
29GO:0006730: one-carbon metabolic process4.63E-03
30GO:0080092: regulation of pollen tube growth4.63E-03
31GO:0009411: response to UV4.91E-03
32GO:0006606: protein import into nucleus5.80E-03
33GO:0010197: polar nucleus fusion6.11E-03
34GO:0048868: pollen tube development6.11E-03
35GO:0009749: response to glucose6.74E-03
36GO:0008654: phospholipid biosynthetic process6.74E-03
37GO:0010193: response to ozone7.07E-03
38GO:0019761: glucosinolate biosynthetic process7.40E-03
39GO:0071805: potassium ion transmembrane transport8.42E-03
40GO:0015995: chlorophyll biosynthetic process1.02E-02
41GO:0010411: xyloglucan metabolic process1.02E-02
42GO:0042546: cell wall biogenesis1.60E-02
43GO:0006810: transport1.71E-02
44GO:0009734: auxin-activated signaling pathway1.85E-02
45GO:0006813: potassium ion transport1.92E-02
46GO:0010224: response to UV-B1.97E-02
47GO:0009416: response to light stimulus2.33E-02
48GO:0009740: gibberellic acid mediated signaling pathway2.37E-02
49GO:0009553: embryo sac development2.42E-02
50GO:0009742: brassinosteroid mediated signaling pathway2.58E-02
51GO:0009793: embryo development ending in seed dormancy3.02E-02
52GO:0042744: hydrogen peroxide catabolic process3.18E-02
53GO:0009790: embryo development3.24E-02
54GO:0009451: RNA modification3.71E-02
55GO:0009739: response to gibberellin3.95E-02
56GO:0007166: cell surface receptor signaling pathway4.01E-02
57GO:0006979: response to oxidative stress4.73E-02
RankGO TermAdjusted P value
1GO:0010276: phytol kinase activity0.00E+00
2GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
3GO:0000293: ferric-chelate reductase activity1.23E-05
4GO:0004451: isocitrate lyase activity6.91E-05
5GO:0005089: Rho guanyl-nucleotide exchange factor activity8.80E-05
6GO:0016491: oxidoreductase activity1.33E-04
7GO:0010277: chlorophyllide a oxygenase [overall] activity2.81E-04
8GO:0004148: dihydrolipoyl dehydrogenase activity2.81E-04
9GO:0003861: 3-isopropylmalate dehydratase activity2.81E-04
10GO:0048038: quinone binding4.85E-04
11GO:0016836: hydro-lyase activity5.42E-04
12GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor5.42E-04
13GO:0043015: gamma-tubulin binding5.42E-04
14GO:0004345: glucose-6-phosphate dehydrogenase activity5.42E-04
15GO:0051011: microtubule minus-end binding6.87E-04
16GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen6.87E-04
17GO:0004462: lactoylglutathione lyase activity8.40E-04
18GO:0004605: phosphatidate cytidylyltransferase activity8.40E-04
19GO:0015631: tubulin binding9.99E-04
20GO:0008081: phosphoric diester hydrolase activity2.82E-03
21GO:0004089: carbonate dehydratase activity2.82E-03
22GO:0008146: sulfotransferase activity3.30E-03
23GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.45E-03
24GO:0015079: potassium ion transmembrane transporter activity4.08E-03
25GO:0004872: receptor activity6.74E-03
26GO:0016762: xyloglucan:xyloglucosyl transferase activity7.07E-03
27GO:0008483: transaminase activity8.42E-03
28GO:0005200: structural constituent of cytoskeleton8.42E-03
29GO:0016798: hydrolase activity, acting on glycosyl bonds1.02E-02
30GO:0050897: cobalt ion binding1.22E-02
31GO:0050661: NADP binding1.43E-02
32GO:0051537: 2 iron, 2 sulfur cluster binding1.65E-02
33GO:0016746: transferase activity, transferring acyl groups2.52E-02
34GO:0019843: rRNA binding2.90E-02
35GO:0016829: lyase activity3.07E-02
36GO:0008565: protein transporter activity3.30E-02
37GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.47E-02
38GO:0008194: UDP-glycosyltransferase activity3.95E-02
39GO:0005506: iron ion binding4.62E-02
40GO:0004601: peroxidase activity4.97E-02
RankGO TermAdjusted P value
1GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)5.07E-05
2GO:0009507: chloroplast5.22E-05
3GO:0008274: gamma-tubulin ring complex1.66E-04
4GO:0000923: equatorial microtubule organizing center4.06E-04
5GO:0009535: chloroplast thylakoid membrane4.24E-04
6GO:0030286: dynein complex5.42E-04
7GO:0000922: spindle pole1.73E-03
8GO:0016324: apical plasma membrane2.14E-03
9GO:0030095: chloroplast photosystem II3.06E-03
10GO:0042651: thylakoid membrane4.08E-03
11GO:0031969: chloroplast membrane8.84E-03
12GO:0009570: chloroplast stroma1.18E-02
13GO:0005747: mitochondrial respiratory chain complex I2.22E-02
14GO:0009706: chloroplast inner membrane2.47E-02
15GO:0010287: plastoglobule2.79E-02
16GO:0009543: chloroplast thylakoid lumen2.90E-02
17GO:0005759: mitochondrial matrix3.41E-02
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Gene type



Gene DE type