GO Enrichment Analysis of Co-expressed Genes with
AT4G38770
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:0010378: temperature compensation of the circadian clock | 0.00E+00 |
| 5 | GO:0005983: starch catabolic process | 1.74E-10 |
| 6 | GO:0010025: wax biosynthetic process | 8.98E-08 |
| 7 | GO:0009409: response to cold | 9.08E-07 |
| 8 | GO:0009631: cold acclimation | 5.46E-06 |
| 9 | GO:0042335: cuticle development | 2.54E-05 |
| 10 | GO:0009735: response to cytokinin | 2.91E-05 |
| 11 | GO:0043489: RNA stabilization | 9.69E-05 |
| 12 | GO:0044262: cellular carbohydrate metabolic process | 9.69E-05 |
| 13 | GO:0032958: inositol phosphate biosynthetic process | 9.69E-05 |
| 14 | GO:0080051: cutin transport | 9.69E-05 |
| 15 | GO:0000025: maltose catabolic process | 9.69E-05 |
| 16 | GO:0006633: fatty acid biosynthetic process | 9.85E-05 |
| 17 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.03E-04 |
| 18 | GO:0009817: defense response to fungus, incompatible interaction | 1.07E-04 |
| 19 | GO:0000038: very long-chain fatty acid metabolic process | 1.44E-04 |
| 20 | GO:0010143: cutin biosynthetic process | 2.19E-04 |
| 21 | GO:0010353: response to trehalose | 2.28E-04 |
| 22 | GO:0015908: fatty acid transport | 2.28E-04 |
| 23 | GO:0006081: cellular aldehyde metabolic process | 3.80E-04 |
| 24 | GO:0006020: inositol metabolic process | 5.46E-04 |
| 25 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.46E-04 |
| 26 | GO:0019252: starch biosynthetic process | 6.99E-04 |
| 27 | GO:0010037: response to carbon dioxide | 7.26E-04 |
| 28 | GO:0010222: stem vascular tissue pattern formation | 7.26E-04 |
| 29 | GO:0015976: carbon utilization | 7.26E-04 |
| 30 | GO:0019464: glycine decarboxylation via glycine cleavage system | 7.26E-04 |
| 31 | GO:0045727: positive regulation of translation | 7.26E-04 |
| 32 | GO:0006536: glutamate metabolic process | 7.26E-04 |
| 33 | GO:2000122: negative regulation of stomatal complex development | 7.26E-04 |
| 34 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 9.17E-04 |
| 35 | GO:0006544: glycine metabolic process | 9.17E-04 |
| 36 | GO:0055114: oxidation-reduction process | 9.34E-04 |
| 37 | GO:0071555: cell wall organization | 9.89E-04 |
| 38 | GO:0007623: circadian rhythm | 9.96E-04 |
| 39 | GO:0006563: L-serine metabolic process | 1.12E-03 |
| 40 | GO:0009913: epidermal cell differentiation | 1.12E-03 |
| 41 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.34E-03 |
| 42 | GO:0009861: jasmonic acid and ethylene-dependent systemic resistance | 1.34E-03 |
| 43 | GO:0009416: response to light stimulus | 1.50E-03 |
| 44 | GO:0009610: response to symbiotic fungus | 1.57E-03 |
| 45 | GO:0050829: defense response to Gram-negative bacterium | 1.57E-03 |
| 46 | GO:0008610: lipid biosynthetic process | 1.81E-03 |
| 47 | GO:0005978: glycogen biosynthetic process | 1.81E-03 |
| 48 | GO:0030091: protein repair | 1.81E-03 |
| 49 | GO:0005975: carbohydrate metabolic process | 2.05E-03 |
| 50 | GO:0032544: plastid translation | 2.07E-03 |
| 51 | GO:0080167: response to karrikin | 2.25E-03 |
| 52 | GO:0005982: starch metabolic process | 2.61E-03 |
| 53 | GO:0035999: tetrahydrofolate interconversion | 2.61E-03 |
| 54 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.20E-03 |
| 55 | GO:0009773: photosynthetic electron transport in photosystem I | 3.20E-03 |
| 56 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.20E-03 |
| 57 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.50E-03 |
| 58 | GO:0009737: response to abscisic acid | 3.71E-03 |
| 59 | GO:0006006: glucose metabolic process | 3.82E-03 |
| 60 | GO:0010588: cotyledon vascular tissue pattern formation | 3.82E-03 |
| 61 | GO:0006807: nitrogen compound metabolic process | 3.82E-03 |
| 62 | GO:0019253: reductive pentose-phosphate cycle | 4.15E-03 |
| 63 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.83E-03 |
| 64 | GO:0030245: cellulose catabolic process | 6.31E-03 |
| 65 | GO:0006012: galactose metabolic process | 6.70E-03 |
| 66 | GO:0000271: polysaccharide biosynthetic process | 7.93E-03 |
| 67 | GO:0042631: cellular response to water deprivation | 7.93E-03 |
| 68 | GO:0045489: pectin biosynthetic process | 8.35E-03 |
| 69 | GO:0015986: ATP synthesis coupled proton transport | 8.79E-03 |
| 70 | GO:0042752: regulation of circadian rhythm | 8.79E-03 |
| 71 | GO:0000302: response to reactive oxygen species | 9.68E-03 |
| 72 | GO:0010090: trichome morphogenesis | 1.06E-02 |
| 73 | GO:0015979: photosynthesis | 1.59E-02 |
| 74 | GO:0010218: response to far red light | 1.62E-02 |
| 75 | GO:0010119: regulation of stomatal movement | 1.68E-02 |
| 76 | GO:0045087: innate immune response | 1.79E-02 |
| 77 | GO:0016051: carbohydrate biosynthetic process | 1.79E-02 |
| 78 | GO:0009637: response to blue light | 1.79E-02 |
| 79 | GO:0009853: photorespiration | 1.79E-02 |
| 80 | GO:0006869: lipid transport | 1.83E-02 |
| 81 | GO:0034599: cellular response to oxidative stress | 1.85E-02 |
| 82 | GO:0042742: defense response to bacterium | 1.86E-02 |
| 83 | GO:0006979: response to oxidative stress | 1.88E-02 |
| 84 | GO:0016042: lipid catabolic process | 2.00E-02 |
| 85 | GO:0006631: fatty acid metabolic process | 2.02E-02 |
| 86 | GO:0042542: response to hydrogen peroxide | 2.08E-02 |
| 87 | GO:0008152: metabolic process | 2.27E-02 |
| 88 | GO:0006855: drug transmembrane transport | 2.39E-02 |
| 89 | GO:0009809: lignin biosynthetic process | 2.65E-02 |
| 90 | GO:0006364: rRNA processing | 2.65E-02 |
| 91 | GO:0009585: red, far-red light phototransduction | 2.65E-02 |
| 92 | GO:0006857: oligopeptide transport | 2.78E-02 |
| 93 | GO:0006096: glycolytic process | 2.99E-02 |
| 94 | GO:0009626: plant-type hypersensitive response | 3.12E-02 |
| 95 | GO:0042545: cell wall modification | 3.33E-02 |
| 96 | GO:0009624: response to nematode | 3.41E-02 |
| 97 | GO:0006396: RNA processing | 3.48E-02 |
| 98 | GO:0042744: hydrogen peroxide catabolic process | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102985: Delta12-fatty-acid desaturase activity | 0.00E+00 |
| 2 | GO:0016720: delta12-fatty acid dehydrogenase activity | 0.00E+00 |
| 3 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 4 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 5 | GO:0051060: pullulanase activity | 0.00E+00 |
| 6 | GO:0008266: poly(U) RNA binding | 5.21E-08 |
| 7 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 7.47E-06 |
| 8 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 7.47E-06 |
| 9 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 7.47E-06 |
| 10 | GO:0004556: alpha-amylase activity | 2.15E-05 |
| 11 | GO:0019203: carbohydrate phosphatase activity | 9.69E-05 |
| 12 | GO:0015245: fatty acid transporter activity | 9.69E-05 |
| 13 | GO:0033857: diphosphoinositol-pentakisphosphate kinase activity | 9.69E-05 |
| 14 | GO:0000829: inositol heptakisphosphate kinase activity | 9.69E-05 |
| 15 | GO:0050521: alpha-glucan, water dikinase activity | 9.69E-05 |
| 16 | GO:0000828: inositol hexakisphosphate kinase activity | 9.69E-05 |
| 17 | GO:0005534: galactose binding | 9.69E-05 |
| 18 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 9.69E-05 |
| 19 | GO:0045485: omega-6 fatty acid desaturase activity | 9.69E-05 |
| 20 | GO:0004134: 4-alpha-glucanotransferase activity | 9.69E-05 |
| 21 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.77E-04 |
| 22 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.28E-04 |
| 23 | GO:0004618: phosphoglycerate kinase activity | 2.28E-04 |
| 24 | GO:0004750: ribulose-phosphate 3-epimerase activity | 2.28E-04 |
| 25 | GO:0018708: thiol S-methyltransferase activity | 2.28E-04 |
| 26 | GO:0030267: glyoxylate reductase (NADP) activity | 3.80E-04 |
| 27 | GO:0070402: NADPH binding | 3.80E-04 |
| 28 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 3.80E-04 |
| 29 | GO:0004324: ferredoxin-NADP+ reductase activity | 3.80E-04 |
| 30 | GO:0070330: aromatase activity | 3.80E-04 |
| 31 | GO:0050734: hydroxycinnamoyltransferase activity | 3.80E-04 |
| 32 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.80E-04 |
| 33 | GO:0016746: transferase activity, transferring acyl groups | 5.24E-04 |
| 34 | GO:0004351: glutamate decarboxylase activity | 5.46E-04 |
| 35 | GO:0019843: rRNA binding | 6.69E-04 |
| 36 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 7.26E-04 |
| 37 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 9.17E-04 |
| 38 | GO:0018685: alkane 1-monooxygenase activity | 9.17E-04 |
| 39 | GO:0004372: glycine hydroxymethyltransferase activity | 9.17E-04 |
| 40 | GO:0003959: NADPH dehydrogenase activity | 9.17E-04 |
| 41 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 1.12E-03 |
| 42 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.12E-03 |
| 43 | GO:0004130: cytochrome-c peroxidase activity | 1.12E-03 |
| 44 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.12E-03 |
| 45 | GO:0004602: glutathione peroxidase activity | 1.34E-03 |
| 46 | GO:0051920: peroxiredoxin activity | 1.34E-03 |
| 47 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.34E-03 |
| 48 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.34E-03 |
| 49 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.81E-03 |
| 50 | GO:0016209: antioxidant activity | 1.81E-03 |
| 51 | GO:0004034: aldose 1-epimerase activity | 1.81E-03 |
| 52 | GO:0015078: hydrogen ion transmembrane transporter activity | 2.07E-03 |
| 53 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 2.33E-03 |
| 54 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 2.61E-03 |
| 55 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 3.50E-03 |
| 56 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.61E-03 |
| 57 | GO:0004089: carbonate dehydratase activity | 3.82E-03 |
| 58 | GO:0004565: beta-galactosidase activity | 3.82E-03 |
| 59 | GO:0005528: FK506 binding | 5.19E-03 |
| 60 | GO:0030170: pyridoxal phosphate binding | 5.83E-03 |
| 61 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 6.31E-03 |
| 62 | GO:0008810: cellulase activity | 6.70E-03 |
| 63 | GO:0003729: mRNA binding | 8.00E-03 |
| 64 | GO:0001085: RNA polymerase II transcription factor binding | 8.35E-03 |
| 65 | GO:0050662: coenzyme binding | 8.79E-03 |
| 66 | GO:0016853: isomerase activity | 8.79E-03 |
| 67 | GO:0048038: quinone binding | 9.68E-03 |
| 68 | GO:0016740: transferase activity | 9.80E-03 |
| 69 | GO:0016791: phosphatase activity | 1.11E-02 |
| 70 | GO:0004601: peroxidase activity | 1.12E-02 |
| 71 | GO:0016788: hydrolase activity, acting on ester bonds | 1.14E-02 |
| 72 | GO:0008237: metallopeptidase activity | 1.16E-02 |
| 73 | GO:0003735: structural constituent of ribosome | 1.24E-02 |
| 74 | GO:0030247: polysaccharide binding | 1.41E-02 |
| 75 | GO:0052689: carboxylic ester hydrolase activity | 1.54E-02 |
| 76 | GO:0004222: metalloendopeptidase activity | 1.62E-02 |
| 77 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.68E-02 |
| 78 | GO:0003993: acid phosphatase activity | 1.85E-02 |
| 79 | GO:0005198: structural molecule activity | 2.33E-02 |
| 80 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.39E-02 |
| 81 | GO:0016491: oxidoreductase activity | 2.63E-02 |
| 82 | GO:0045330: aspartyl esterase activity | 2.85E-02 |
| 83 | GO:0008289: lipid binding | 2.87E-02 |
| 84 | GO:0004650: polygalacturonase activity | 3.19E-02 |
| 85 | GO:0030599: pectinesterase activity | 3.26E-02 |
| 86 | GO:0016758: transferase activity, transferring hexosyl groups | 3.92E-02 |
| 87 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.38E-02 |
| 88 | GO:0046910: pectinesterase inhibitor activity | 4.78E-02 |
| 89 | GO:0016787: hydrolase activity | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 5.81E-22 |
| 2 | GO:0009941: chloroplast envelope | 3.66E-17 |
| 3 | GO:0009507: chloroplast | 1.45E-16 |
| 4 | GO:0009579: thylakoid | 2.89E-12 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 3.01E-11 |
| 6 | GO:0009534: chloroplast thylakoid | 7.09E-11 |
| 7 | GO:0048046: apoplast | 8.19E-08 |
| 8 | GO:0010319: stromule | 1.70E-06 |
| 9 | GO:0010287: plastoglobule | 3.01E-06 |
| 10 | GO:0000311: plastid large ribosomal subunit | 1.68E-04 |
| 11 | GO:0030093: chloroplast photosystem I | 2.28E-04 |
| 12 | GO:0009897: external side of plasma membrane | 3.80E-04 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 6.69E-04 |
| 14 | GO:0016020: membrane | 9.41E-04 |
| 15 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 1.12E-03 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 1.57E-03 |
| 17 | GO:0009501: amyloplast | 1.81E-03 |
| 18 | GO:0031090: organelle membrane | 2.33E-03 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.33E-03 |
| 20 | GO:0005783: endoplasmic reticulum | 3.27E-03 |
| 21 | GO:0009508: plastid chromosome | 3.82E-03 |
| 22 | GO:0000312: plastid small ribosomal subunit | 4.15E-03 |
| 23 | GO:0071944: cell periphery | 1.06E-02 |
| 24 | GO:0009295: nucleoid | 1.16E-02 |
| 25 | GO:0030529: intracellular ribonucleoprotein complex | 1.25E-02 |
| 26 | GO:0005667: transcription factor complex | 1.36E-02 |
| 27 | GO:0031977: thylakoid lumen | 2.02E-02 |
| 28 | GO:0005789: endoplasmic reticulum membrane | 3.17E-02 |
| 29 | GO:0005618: cell wall | 3.45E-02 |
| 30 | GO:0005654: nucleoplasm | 3.92E-02 |
| 31 | GO:0005759: mitochondrial matrix | 4.70E-02 |