Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G38540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
2GO:0009820: alkaloid metabolic process9.64E-06
3GO:0010365: positive regulation of ethylene biosynthetic process9.64E-06
4GO:0046256: 2,4,6-trinitrotoluene catabolic process9.64E-06
5GO:0032491: detection of molecule of fungal origin9.64E-06
6GO:0002240: response to molecule of oomycetes origin2.58E-05
7GO:0009413: response to flooding7.16E-05
8GO:0051365: cellular response to potassium ion starvation9.96E-05
9GO:0006564: L-serine biosynthetic process1.30E-04
10GO:0002238: response to molecule of fungal origin1.63E-04
11GO:0009228: thiamine biosynthetic process1.63E-04
12GO:0009620: response to fungus2.22E-04
13GO:0050829: defense response to Gram-negative bacterium2.34E-04
14GO:0010204: defense response signaling pathway, resistance gene-independent3.11E-04
15GO:0009058: biosynthetic process3.24E-04
16GO:0002237: response to molecule of bacterial origin6.14E-04
17GO:0006874: cellular calcium ion homeostasis8.07E-04
18GO:0071456: cellular response to hypoxia9.08E-04
19GO:0030245: cellulose catabolic process9.08E-04
20GO:0009561: megagametogenesis1.01E-03
21GO:0008284: positive regulation of cell proliferation1.07E-03
22GO:0009407: toxin catabolic process2.19E-03
23GO:0009636: response to toxic substance3.08E-03
24GO:0006857: oligopeptide transport3.65E-03
25GO:0071555: cell wall organization3.96E-03
26GO:0030154: cell differentiation4.32E-03
27GO:0042545: cell wall modification4.34E-03
28GO:0045490: pectin catabolic process6.45E-03
29GO:0009617: response to bacterium7.30E-03
30GO:0007275: multicellular organism development7.77E-03
31GO:0009793: embryo development ending in seed dormancy9.14E-03
32GO:0080167: response to karrikin1.02E-02
33GO:0046777: protein autophosphorylation1.07E-02
34GO:0009753: response to jasmonic acid1.41E-02
35GO:0006357: regulation of transcription from RNA polymerase II promoter1.63E-02
36GO:0009416: response to light stimulus2.01E-02
37GO:0009555: pollen development2.01E-02
38GO:0009611: response to wounding2.04E-02
39GO:0035556: intracellular signal transduction2.09E-02
40GO:0055085: transmembrane transport2.38E-02
41GO:0055114: oxidation-reduction process3.34E-02
42GO:0046686: response to cadmium ion4.57E-02
RankGO TermAdjusted P value
1GO:0004617: phosphoglycerate dehydrogenase activity2.58E-05
2GO:0019172: glyoxalase III activity2.58E-05
3GO:0043295: glutathione binding2.34E-04
4GO:0004033: aldo-keto reductase (NADP) activity2.72E-04
5GO:0016844: strictosidine synthase activity3.93E-04
6GO:0015198: oligopeptide transporter activity5.23E-04
7GO:0008083: growth factor activity6.14E-04
8GO:0005217: intracellular ligand-gated ion channel activity6.61E-04
9GO:0004970: ionotropic glutamate receptor activity6.61E-04
10GO:0008810: cellulase activity9.61E-04
11GO:0005199: structural constituent of cell wall1.18E-03
12GO:0016597: amino acid binding1.65E-03
13GO:0004364: glutathione transferase activity2.77E-03
14GO:0051287: NAD binding3.24E-03
15GO:0043565: sequence-specific DNA binding3.47E-03
16GO:0045330: aspartyl esterase activity3.74E-03
17GO:0030599: pectinesterase activity4.26E-03
18GO:0022857: transmembrane transporter activity4.26E-03
19GO:0046910: pectinesterase inhibitor activity6.15E-03
20GO:0016788: hydrolase activity, acting on ester bonds8.86E-03
21GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.15E-02
22GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.24E-02
23GO:0009055: electron carrier activity1.41E-02
24GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.45E-02
25GO:0005507: copper ion binding2.59E-02
26GO:0044212: transcription regulatory region DNA binding3.33E-02
27GO:0003824: catalytic activity3.56E-02
28GO:0016491: oxidoreductase activity4.05E-02
29GO:0004672: protein kinase activity4.38E-02
RankGO TermAdjusted P value
1GO:0071944: cell periphery1.47E-03
2GO:0009505: plant-type cell wall4.96E-03
3GO:0005829: cytosol6.14E-03
4GO:0005615: extracellular space6.98E-03
5GO:0046658: anchored component of plasma membrane7.84E-03
6GO:0005576: extracellular region9.70E-03
7GO:0009506: plasmodesma1.16E-02
8GO:0005886: plasma membrane1.17E-02
9GO:0005774: vacuolar membrane1.37E-02
10GO:0005618: cell wall1.57E-02
11GO:0005773: vacuole2.11E-02
12GO:0031225: anchored component of membrane2.76E-02
13GO:0005802: trans-Golgi network2.82E-02
14GO:0005768: endosome3.09E-02
15GO:0009536: plastid3.85E-02
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Gene type



Gene DE type