GO Enrichment Analysis of Co-expressed Genes with
AT4G38480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010162: seed dormancy process | 1.20E-06 |
| 2 | GO:0034470: ncRNA processing | 1.33E-05 |
| 3 | GO:0010163: high-affinity potassium ion import | 1.33E-05 |
| 4 | GO:0033320: UDP-D-xylose biosynthetic process | 5.40E-05 |
| 5 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 5.40E-05 |
| 6 | GO:0042732: D-xylose metabolic process | 9.04E-05 |
| 7 | GO:0006413: translational initiation | 1.69E-04 |
| 8 | GO:0034765: regulation of ion transmembrane transport | 2.02E-04 |
| 9 | GO:0030422: production of siRNA involved in RNA interference | 2.53E-04 |
| 10 | GO:0042254: ribosome biogenesis | 2.91E-04 |
| 11 | GO:0006108: malate metabolic process | 3.33E-04 |
| 12 | GO:0009225: nucleotide-sugar metabolic process | 3.90E-04 |
| 13 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.48E-04 |
| 14 | GO:0009294: DNA mediated transformation | 5.71E-04 |
| 15 | GO:0042391: regulation of membrane potential | 6.67E-04 |
| 16 | GO:0009735: response to cytokinin | 8.23E-04 |
| 17 | GO:0016126: sterol biosynthetic process | 1.01E-03 |
| 18 | GO:0006099: tricarboxylic acid cycle | 1.44E-03 |
| 19 | GO:0016569: covalent chromatin modification | 2.46E-03 |
| 20 | GO:0009624: response to nematode | 2.56E-03 |
| 21 | GO:0042744: hydrogen peroxide catabolic process | 3.25E-03 |
| 22 | GO:0009790: embryo development | 3.31E-03 |
| 23 | GO:0045892: negative regulation of transcription, DNA-templated | 6.62E-03 |
| 24 | GO:0006412: translation | 8.99E-03 |
| 25 | GO:0006979: response to oxidative stress | 1.88E-02 |
| 26 | GO:0009409: response to cold | 2.32E-02 |
| 27 | GO:0005975: carbohydrate metabolic process | 2.52E-02 |
| 28 | GO:0007165: signal transduction | 3.16E-02 |
| 29 | GO:0009793: embryo development ending in seed dormancy | 3.40E-02 |
| 30 | GO:0050832: defense response to fungus | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004421: hydroxymethylglutaryl-CoA synthase activity | 0.00E+00 |
| 2 | GO:0004407: histone deacetylase activity | 3.80E-06 |
| 3 | GO:0008746: NAD(P)+ transhydrogenase activity | 4.83E-06 |
| 4 | GO:0016615: malate dehydrogenase activity | 9.04E-05 |
| 5 | GO:0048040: UDP-glucuronate decarboxylase activity | 9.04E-05 |
| 6 | GO:0005242: inward rectifier potassium channel activity | 1.11E-04 |
| 7 | GO:0070403: NAD+ binding | 1.11E-04 |
| 8 | GO:0030060: L-malate dehydrogenase activity | 1.11E-04 |
| 9 | GO:0008135: translation factor activity, RNA binding | 1.78E-04 |
| 10 | GO:0003743: translation initiation factor activity | 2.14E-04 |
| 11 | GO:0005249: voltage-gated potassium channel activity | 6.67E-04 |
| 12 | GO:0030551: cyclic nucleotide binding | 6.67E-04 |
| 13 | GO:0003735: structural constituent of ribosome | 3.45E-03 |
| 14 | GO:0004601: peroxidase activity | 4.99E-03 |
| 15 | GO:0043531: ADP binding | 5.32E-03 |
| 16 | GO:0003924: GTPase activity | 7.58E-03 |
| 17 | GO:0003723: RNA binding | 1.35E-02 |
| 18 | GO:0005525: GTP binding | 1.61E-02 |
| 19 | GO:0003824: catalytic activity | 2.00E-02 |
| 20 | GO:0003729: mRNA binding | 2.48E-02 |
| 21 | GO:0020037: heme binding | 2.59E-02 |
| 22 | GO:0016787: hydrolase activity | 3.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005730: nucleolus | 9.34E-09 |
| 2 | GO:0005829: cytosol | 2.83E-05 |
| 3 | GO:0009532: plastid stroma | 5.09E-04 |
| 4 | GO:0010319: stromule | 9.42E-04 |
| 5 | GO:0030529: intracellular ribonucleoprotein complex | 1.01E-03 |
| 6 | GO:0005840: ribosome | 1.84E-03 |
| 7 | GO:0005654: nucleoplasm | 2.93E-03 |
| 8 | GO:0005774: vacuolar membrane | 5.97E-03 |
| 9 | GO:0022625: cytosolic large ribosomal subunit | 5.99E-03 |
| 10 | GO:0005618: cell wall | 6.83E-03 |
| 11 | GO:0005887: integral component of plasma membrane | 9.38E-03 |
| 12 | GO:0022626: cytosolic ribosome | 1.10E-02 |
| 13 | GO:0009536: plastid | 2.16E-02 |
| 14 | GO:0009506: plasmodesma | 2.30E-02 |
| 15 | GO:0048046: apoplast | 4.70E-02 |