co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G37300

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000372: Group I intron splicing	0.00E+00
2	GO:0042493: response to drug	0.00E+00
3	GO:0061157: mRNA destabilization	0.00E+00
4	GO:0042371: vitamin K biosynthetic process	1.23E-04
5	GO:0005977: glycogen metabolic process	4.72E-04
6	GO:0009650: UV protection	6.76E-04
7	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	6.76E-04
8	GO:0009102: biotin biosynthetic process	6.76E-04
9	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	6.76E-04
10	GO:0015979: photosynthesis	7.12E-04
11	GO:0010021: amylopectin biosynthetic process	8.97E-04
12	GO:0005975: carbohydrate metabolic process	9.59E-04
13	GO:0016558: protein import into peroxisome matrix	1.13E-03
14	GO:0016123: xanthophyll biosynthetic process	1.13E-03
15	GO:0000741: karyogamy	1.39E-03
16	GO:0010189: vitamin E biosynthetic process	1.66E-03
17	GO:0030091: protein repair	2.26E-03
18	GO:0048564: photosystem I assembly	2.26E-03
19	GO:0010112: regulation of systemic acquired resistance	2.91E-03
20	GO:0000373: Group II intron splicing	2.91E-03
21	GO:0006098: pentose-phosphate shunt	2.91E-03
22	GO:0009744: response to sucrose	3.06E-03
23	GO:0009638: phototropism	3.26E-03
24	GO:0080167: response to karrikin	3.41E-03
25	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.62E-03
26	GO:0006949: syncytium formation	3.62E-03
27	GO:0009664: plant-type cell wall organization	3.83E-03
28	GO:1903507: negative regulation of nucleic acid-templated transcription	4.00E-03
29	GO:0009750: response to fructose	4.00E-03
30	GO:0009773: photosynthetic electron transport in photosystem I	4.00E-03
31	GO:0010628: positive regulation of gene expression	4.79E-03
32	GO:0009725: response to hormone	4.79E-03
33	GO:0006094: gluconeogenesis	4.79E-03
34	GO:2000012: regulation of auxin polar transport	4.79E-03
35	GO:0010030: positive regulation of seed germination	5.63E-03
36	GO:0006863: purine nucleobase transport	6.06E-03
37	GO:0006833: water transport	6.06E-03
38	GO:0080147: root hair cell development	6.51E-03
39	GO:0007017: microtubule-based process	6.98E-03
40	GO:0048511: rhythmic process	7.45E-03
41	GO:2000022: regulation of jasmonic acid mediated signaling pathway	7.93E-03
42	GO:0080092: regulation of pollen tube growth	7.93E-03
43	GO:0009411: response to UV	8.43E-03
44	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	8.43E-03
45	GO:0006284: base-excision repair	8.93E-03
46	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.45E-03
47	GO:0034220: ion transmembrane transport	9.99E-03
48	GO:0042631: cellular response to water deprivation	9.99E-03
49	GO:0010197: polar nucleus fusion	1.05E-02
50	GO:0048868: pollen tube development	1.05E-02
51	GO:0007018: microtubule-based movement	1.11E-02
52	GO:0042752: regulation of circadian rhythm	1.11E-02
53	GO:0007166: cell surface receptor signaling pathway	1.15E-02
54	GO:0009749: response to glucose	1.16E-02
55	GO:0019252: starch biosynthetic process	1.16E-02
56	GO:0008654: phospholipid biosynthetic process	1.16E-02
57	GO:0006635: fatty acid beta-oxidation	1.22E-02
58	GO:0010193: response to ozone	1.22E-02
59	GO:0010583: response to cyclopentenone	1.28E-02
60	GO:0016032: viral process	1.28E-02
61	GO:0032502: developmental process	1.28E-02
62	GO:0009828: plant-type cell wall loosening	1.40E-02
63	GO:0001666: response to hypoxia	1.58E-02
64	GO:0009627: systemic acquired resistance	1.71E-02
65	GO:0015995: chlorophyll biosynthetic process	1.78E-02
66	GO:0016311: dephosphorylation	1.85E-02
67	GO:0009817: defense response to fungus, incompatible interaction	1.91E-02
68	GO:0032259: methylation	2.75E-02
69	GO:0016042: lipid catabolic process	2.79E-02
70	GO:0006281: DNA repair	2.87E-02
71	GO:0031347: regulation of defense response	3.11E-02
72	GO:0055114: oxidation-reduction process	3.17E-02
73	GO:0009585: red, far-red light phototransduction	3.35E-02
74	GO:0010224: response to UV-B	3.44E-02
75	GO:0006096: glycolytic process	3.78E-02
76	GO:0009740: gibberellic acid mediated signaling pathway	4.13E-02
77	GO:0009553: embryo sac development	4.22E-02
78	GO:0009742: brassinosteroid mediated signaling pathway	4.49E-02
79	GO:0006810: transport	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0010276: phytol kinase activity	0.00E+00
2	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
3	GO:0004076: biotin synthase activity	0.00E+00
4	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
5	GO:0042623: ATPase activity, coupled	0.00E+00
6	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.05E-04
7	GO:0019156: isoamylase activity	2.86E-04
8	GO:0004148: dihydrolipoyl dehydrogenase activity	4.72E-04
9	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	8.97E-04
10	GO:0008725: DNA-3-methyladenine glycosylase activity	1.13E-03
11	GO:0004556: alpha-amylase activity	1.39E-03
12	GO:0004462: lactoylglutathione lyase activity	1.39E-03
13	GO:0004605: phosphatidate cytidylyltransferase activity	1.39E-03
14	GO:0004332: fructose-bisphosphate aldolase activity	1.39E-03
15	GO:0042578: phosphoric ester hydrolase activity	1.39E-03
16	GO:0008195: phosphatidate phosphatase activity	1.66E-03
17	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.66E-03
18	GO:0003993: acid phosphatase activity	2.49E-03
19	GO:0008081: phosphoric diester hydrolase activity	4.79E-03
20	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.20E-03
21	GO:0003714: transcription corepressor activity	6.51E-03
22	GO:0005345: purine nucleobase transmembrane transporter activity	6.98E-03
23	GO:0003727: single-stranded RNA binding	8.93E-03
24	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.39E-03
25	GO:0016491: oxidoreductase activity	1.10E-02
26	GO:0004872: receptor activity	1.16E-02
27	GO:0048038: quinone binding	1.22E-02
28	GO:0015250: water channel activity	1.58E-02
29	GO:0016788: hydrolase activity, acting on ester bonds	1.59E-02
30	GO:0005096: GTPase activator activity	1.98E-02
31	GO:0050897: cobalt ion binding	2.12E-02
32	GO:0052689: carboxylic ester hydrolase activity	2.15E-02
33	GO:0051539: 4 iron, 4 sulfur cluster binding	2.48E-02
34	GO:0004364: glutathione transferase activity	2.63E-02
35	GO:0051537: 2 iron, 2 sulfur cluster binding	2.87E-02
36	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.03E-02
37	GO:0009055: electron carrier activity	3.08E-02
38	GO:0003777: microtubule motor activity	3.60E-02
39	GO:0004650: polygalacturonase activity	4.04E-02
40	GO:0016887: ATPase activity	4.43E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009535: chloroplast thylakoid membrane	3.88E-07
3	GO:0009507: chloroplast	5.31E-07
4	GO:0009538: photosystem I reaction center	8.75E-07
5	GO:0009543: chloroplast thylakoid lumen	7.99E-06
6	GO:0009579: thylakoid	1.31E-04
7	GO:0030095: chloroplast photosystem II	3.07E-04
8	GO:0009654: photosystem II oxygen evolving complex	4.71E-04
9	GO:0009531: secondary cell wall	6.76E-04
10	GO:0030286: dynein complex	8.97E-04
11	GO:0019898: extrinsic component of membrane	9.56E-04
12	GO:0031977: thylakoid lumen	2.82E-03
13	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.91E-03
14	GO:0009534: chloroplast thylakoid	3.31E-03
15	GO:0016324: apical plasma membrane	3.62E-03
16	GO:0090404: pollen tube tip	4.00E-03
17	GO:0010287: plastoglobule	6.91E-03
18	GO:0009532: plastid stroma	7.45E-03
19	GO:0005871: kinesin complex	9.45E-03
20	GO:0005778: peroxisomal membrane	1.46E-02
21	GO:0030529: intracellular ribonucleoprotein complex	1.58E-02
22	GO:0031969: chloroplast membrane	1.94E-02
23	GO:0009941: chloroplast envelope	2.59E-02
24	GO:0016020: membrane	2.95E-02
25	GO:0005747: mitochondrial respiratory chain complex I	3.86E-02
26	GO:0005887: integral component of plasma membrane	3.88E-02
27	GO:0009570: chloroplast stroma	4.48E-02