co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G37230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
2	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
3	GO:0009773: photosynthetic electron transport in photosystem I	1.31E-06
4	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.80E-06
5	GO:0010021: amylopectin biosynthetic process	5.37E-06
6	GO:0043953: protein transport by the Tat complex	7.39E-05
7	GO:0000476: maturation of 4.5S rRNA	7.39E-05
8	GO:0000967: rRNA 5'-end processing	7.39E-05
9	GO:0000481: maturation of 5S rRNA	7.39E-05
10	GO:0065002: intracellular protein transmembrane transport	7.39E-05
11	GO:0043007: maintenance of rDNA	7.39E-05
12	GO:0034337: RNA folding	7.39E-05
13	GO:0018026: peptidyl-lysine monomethylation	1.77E-04
14	GO:0080181: lateral root branching	1.77E-04
15	GO:0034470: ncRNA processing	1.77E-04
16	GO:0015979: photosynthesis	2.40E-04
17	GO:0005977: glycogen metabolic process	2.99E-04
18	GO:0019252: starch biosynthetic process	4.95E-04
19	GO:0006109: regulation of carbohydrate metabolic process	5.75E-04
20	GO:0006552: leucine catabolic process	5.75E-04
21	GO:0042549: photosystem II stabilization	8.91E-04
22	GO:0006810: transport	1.02E-03
23	GO:0022904: respiratory electron transport chain	1.24E-03
24	GO:0005978: glycogen biosynthetic process	1.43E-03
25	GO:0032508: DNA duplex unwinding	1.43E-03
26	GO:0010205: photoinhibition	2.05E-03
27	GO:0005982: starch metabolic process	2.05E-03
28	GO:0048829: root cap development	2.28E-03
29	GO:0019684: photosynthesis, light reaction	2.51E-03
30	GO:0009089: lysine biosynthetic process via diaminopimelate	2.51E-03
31	GO:0009073: aromatic amino acid family biosynthetic process	2.51E-03
32	GO:0043085: positive regulation of catalytic activity	2.51E-03
33	GO:0010628: positive regulation of gene expression	3.00E-03
34	GO:0006302: double-strand break repair	3.25E-03
35	GO:0010030: positive regulation of seed germination	3.51E-03
36	GO:0009409: response to cold	4.00E-03
37	GO:0019915: lipid storage	4.63E-03
38	GO:0051321: meiotic cell cycle	4.63E-03
39	GO:0005975: carbohydrate metabolic process	4.75E-03
40	GO:0019748: secondary metabolic process	4.93E-03
41	GO:0009686: gibberellin biosynthetic process	5.23E-03
42	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.86E-03
43	GO:0042631: cellular response to water deprivation	6.18E-03
44	GO:0006662: glycerol ether metabolic process	6.51E-03
45	GO:0009646: response to absence of light	6.84E-03
46	GO:0071554: cell wall organization or biogenesis	7.53E-03
47	GO:1901657: glycosyl compound metabolic process	8.25E-03
48	GO:0009567: double fertilization forming a zygote and endosperm	8.61E-03
49	GO:0010027: thylakoid membrane organization	9.74E-03
50	GO:0009627: systemic acquired resistance	1.05E-02
51	GO:0016311: dephosphorylation	1.13E-02
52	GO:0045454: cell redox homeostasis	1.16E-02
53	GO:0009834: plant-type secondary cell wall biogenesis	1.26E-02
54	GO:0006499: N-terminal protein myristoylation	1.26E-02
55	GO:0009631: cold acclimation	1.30E-02
56	GO:0034599: cellular response to oxidative stress	1.43E-02
57	GO:0006096: glycolytic process	2.31E-02
58	GO:0043086: negative regulation of catalytic activity	2.31E-02
59	GO:0009740: gibberellic acid mediated signaling pathway	2.53E-02
60	GO:0008380: RNA splicing	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
2	GO:0048039: ubiquinone binding	0.00E+00
3	GO:0009899: ent-kaurene synthase activity	0.00E+00
4	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
5	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	5.37E-06
6	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	7.39E-05
7	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.77E-04
8	GO:0003844: 1,4-alpha-glucan branching enzyme activity	1.77E-04
9	GO:0019156: isoamylase activity	1.77E-04
10	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.77E-04
11	GO:0016868: intramolecular transferase activity, phosphotransferases	1.77E-04
12	GO:0009977: proton motive force dependent protein transmembrane transporter activity	1.77E-04
13	GO:0043169: cation binding	2.99E-04
14	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	4.32E-04
15	GO:0048038: quinone binding	5.29E-04
16	GO:0004045: aminoacyl-tRNA hydrolase activity	5.75E-04
17	GO:0016279: protein-lysine N-methyltransferase activity	5.75E-04
18	GO:0004556: alpha-amylase activity	8.91E-04
19	GO:0030145: manganese ion binding	1.12E-03
20	GO:0004033: aldo-keto reductase (NADP) activity	1.43E-03
21	GO:0008047: enzyme activator activity	2.28E-03
22	GO:0004857: enzyme inhibitor activity	4.06E-03
23	GO:0008408: 3'-5' exonuclease activity	4.63E-03
24	GO:0047134: protein-disulfide reductase activity	5.86E-03
25	GO:0004791: thioredoxin-disulfide reductase activity	6.84E-03
26	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	6.85E-03
27	GO:0000287: magnesium ion binding	7.68E-03
28	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	8.25E-03
29	GO:0016413: O-acetyltransferase activity	9.36E-03
30	GO:0102483: scopolin beta-glucosidase activity	1.09E-02
31	GO:0004722: protein serine/threonine phosphatase activity	1.28E-02
32	GO:0003993: acid phosphatase activity	1.43E-02
33	GO:0008422: beta-glucosidase activity	1.48E-02
34	GO:0051539: 4 iron, 4 sulfur cluster binding	1.52E-02
35	GO:0009055: electron carrier activity	1.54E-02
36	GO:0004185: serine-type carboxypeptidase activity	1.66E-02
37	GO:0016491: oxidoreductase activity	1.67E-02
38	GO:0051537: 2 iron, 2 sulfur cluster binding	1.76E-02
39	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.85E-02
40	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.37E-02
41	GO:0015035: protein disulfide oxidoreductase activity	2.69E-02
42	GO:0019843: rRNA binding	3.10E-02
43	GO:0005509: calcium ion binding	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0010368: chloroplast isoamylase complex	0.00E+00
3	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
4	GO:0043235: receptor complex	0.00E+00
5	GO:0009507: chloroplast	6.54E-15
6	GO:0009535: chloroplast thylakoid membrane	6.98E-10
7	GO:0009570: chloroplast stroma	2.47E-09
8	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.63E-09
9	GO:0009534: chloroplast thylakoid	1.06E-07
10	GO:0030095: chloroplast photosystem II	2.68E-06
11	GO:0009543: chloroplast thylakoid lumen	3.26E-05
12	GO:0000791: euchromatin	7.39E-05
13	GO:0031361: integral component of thylakoid membrane	7.39E-05
14	GO:0009941: chloroplast envelope	1.48E-04
15	GO:0030870: Mre11 complex	1.77E-04
16	GO:0009579: thylakoid	1.95E-04
17	GO:0009654: photosystem II oxygen evolving complex	2.37E-04
18	GO:0033281: TAT protein transport complex	2.99E-04
19	GO:0019898: extrinsic component of membrane	4.95E-04
20	GO:0000795: synaptonemal complex	7.29E-04
21	GO:0009533: chloroplast stromal thylakoid	1.24E-03
22	GO:0009538: photosystem I reaction center	1.43E-03
23	GO:0031305: integral component of mitochondrial inner membrane	1.43E-03
24	GO:0009501: amyloplast	1.43E-03
25	GO:0005740: mitochondrial envelope	2.28E-03
26	GO:0032040: small-subunit processome	2.75E-03
27	GO:0005578: proteinaceous extracellular matrix	3.00E-03
28	GO:0042651: thylakoid membrane	4.34E-03
29	GO:0009523: photosystem II	7.19E-03
30	GO:0000785: chromatin	7.89E-03
31	GO:0010319: stromule	8.98E-03
32	GO:0030529: intracellular ribonucleoprotein complex	9.74E-03
33	GO:0031977: thylakoid lumen	1.57E-02
34	GO:0010287: plastoglobule	2.98E-02