co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G36540

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:0061157: mRNA destabilization	0.00E+00
3	GO:0045014: negative regulation of transcription by glucose	0.00E+00
4	GO:0009733: response to auxin	8.39E-06
5	GO:0009734: auxin-activated signaling pathway	5.98E-05
6	GO:0005992: trehalose biosynthetic process	1.81E-04
7	GO:0005977: glycogen metabolic process	2.69E-04
8	GO:0009650: UV protection	3.90E-04
9	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.90E-04
10	GO:0010583: response to cyclopentenone	4.86E-04
11	GO:0040008: regulation of growth	4.95E-04
12	GO:0010021: amylopectin biosynthetic process	5.20E-04
13	GO:0022622: root system development	5.20E-04
14	GO:0010158: abaxial cell fate specification	6.60E-04
15	GO:0009942: longitudinal axis specification	9.59E-04
16	GO:0032880: regulation of protein localization	1.12E-03
17	GO:0010050: vegetative phase change	1.12E-03
18	GO:0009850: auxin metabolic process	1.29E-03
19	GO:0006605: protein targeting	1.29E-03
20	GO:0010492: maintenance of shoot apical meristem identity	1.29E-03
21	GO:0070413: trehalose metabolism in response to stress	1.29E-03
22	GO:0007389: pattern specification process	1.47E-03
23	GO:0009827: plant-type cell wall modification	1.47E-03
24	GO:0048589: developmental growth	1.65E-03
25	GO:0006098: pentose-phosphate shunt	1.65E-03
26	GO:0048507: meristem development	1.65E-03
27	GO:0009664: plant-type cell wall organization	1.67E-03
28	GO:0006949: syncytium formation	2.05E-03
29	GO:0009773: photosynthetic electron transport in photosystem I	2.26E-03
30	GO:0010152: pollen maturation	2.48E-03
31	GO:0010582: floral meristem determinacy	2.48E-03
32	GO:0010628: positive regulation of gene expression	2.70E-03
33	GO:0006094: gluconeogenesis	2.70E-03
34	GO:2000012: regulation of auxin polar transport	2.70E-03
35	GO:0010207: photosystem II assembly	2.93E-03
36	GO:0010030: positive regulation of seed germination	3.16E-03
37	GO:0005975: carbohydrate metabolic process	3.74E-03
38	GO:0009416: response to light stimulus	3.95E-03
39	GO:0048511: rhythmic process	4.17E-03
40	GO:0009411: response to UV	4.70E-03
41	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.70E-03
42	GO:0007166: cell surface receptor signaling pathway	4.95E-03
43	GO:0009306: protein secretion	4.98E-03
44	GO:0048443: stamen development	4.98E-03
45	GO:0006284: base-excision repair	4.98E-03
46	GO:0008284: positive regulation of cell proliferation	5.26E-03
47	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.26E-03
48	GO:0042631: cellular response to water deprivation	5.55E-03
49	GO:0009958: positive gravitropism	5.85E-03
50	GO:0046323: glucose import	5.85E-03
51	GO:0009741: response to brassinosteroid	5.85E-03
52	GO:0007018: microtubule-based movement	6.15E-03
53	GO:0042752: regulation of circadian rhythm	6.15E-03
54	GO:0019252: starch biosynthetic process	6.45E-03
55	GO:0009826: unidimensional cell growth	6.45E-03
56	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	6.76E-03
57	GO:0016032: viral process	7.08E-03
58	GO:0032502: developmental process	7.08E-03
59	GO:0009828: plant-type cell wall loosening	7.73E-03
60	GO:0010252: auxin homeostasis	7.73E-03
61	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.59E-03
62	GO:0001666: response to hypoxia	8.74E-03
63	GO:0010027: thylakoid membrane organization	8.74E-03
64	GO:0048573: photoperiodism, flowering	9.79E-03
65	GO:0045892: negative regulation of transcription, DNA-templated	1.01E-02
66	GO:0016567: protein ubiquitination	1.07E-02
67	GO:0048527: lateral root development	1.17E-02
68	GO:0006281: DNA repair	1.23E-02
69	GO:0009926: auxin polar transport	1.49E-02
70	GO:0009640: photomorphogenesis	1.49E-02
71	GO:0006417: regulation of translation	1.98E-02
72	GO:0006096: glycolytic process	2.07E-02
73	GO:0009740: gibberellic acid mediated signaling pathway	2.26E-02
74	GO:0007275: multicellular organism development	2.27E-02
75	GO:0007165: signal transduction	2.44E-02
76	GO:0009742: brassinosteroid mediated signaling pathway	2.46E-02
77	GO:0045490: pectin catabolic process	3.49E-02
78	GO:0009739: response to gibberellin	3.78E-02
79	GO:0006468: protein phosphorylation	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0004805: trehalose-phosphatase activity	6.92E-05
2	GO:0019156: isoamylase activity	1.59E-04
3	GO:0005354: galactose transmembrane transporter activity	3.90E-04
4	GO:0010011: auxin binding	5.20E-04
5	GO:0008725: DNA-3-methyladenine glycosylase activity	6.60E-04
6	GO:0004556: alpha-amylase activity	8.06E-04
7	GO:0004462: lactoylglutathione lyase activity	8.06E-04
8	GO:0004332: fructose-bisphosphate aldolase activity	8.06E-04
9	GO:0042578: phosphoric ester hydrolase activity	8.06E-04
10	GO:0004871: signal transducer activity	1.56E-03
11	GO:0009672: auxin:proton symporter activity	1.85E-03
12	GO:0015020: glucuronosyltransferase activity	2.05E-03
13	GO:0010329: auxin efflux transmembrane transporter activity	2.70E-03
14	GO:0008083: growth factor activity	2.93E-03
15	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.05E-03
16	GO:0030570: pectate lyase activity	4.70E-03
17	GO:0003727: single-stranded RNA binding	4.98E-03
18	GO:0005355: glucose transmembrane transporter activity	6.15E-03
19	GO:0016791: phosphatase activity	7.73E-03
20	GO:0008236: serine-type peptidase activity	1.02E-02
21	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.05E-02
22	GO:0005096: GTPase activator activity	1.09E-02
23	GO:0003824: catalytic activity	1.09E-02
24	GO:0003777: microtubule motor activity	1.98E-02
25	GO:0031625: ubiquitin protein ligase binding	1.98E-02
26	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.21E-02
27	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.21E-02
28	GO:0016874: ligase activity	2.26E-02
29	GO:0016758: transferase activity, transferring hexosyl groups	2.72E-02
30	GO:0016829: lyase activity	2.93E-02
31	GO:0030246: carbohydrate binding	2.94E-02
32	GO:0004252: serine-type endopeptidase activity	2.99E-02
33	GO:0015144: carbohydrate transmembrane transporter activity	3.15E-02
34	GO:0005351: sugar:proton symporter activity	3.43E-02
35	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.55E-02
36	GO:0008017: microtubule binding	3.60E-02
37	GO:0008194: UDP-glycosyltransferase activity	3.78E-02
38	GO:0008270: zinc ion binding	4.15E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
3	GO:0009531: secondary cell wall	3.90E-04
4	GO:0005886: plasma membrane	2.25E-03
5	GO:0009654: photosystem II oxygen evolving complex	3.90E-03
6	GO:0005871: kinesin complex	5.26E-03
7	GO:0019898: extrinsic component of membrane	6.45E-03
8	GO:0000151: ubiquitin ligase complex	1.05E-02
9	GO:0009543: chloroplast thylakoid lumen	2.77E-02
10	GO:0005615: extracellular space	3.78E-02