co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G36290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
2	GO:0008298: intracellular mRNA localization	0.00E+00
3	GO:0019685: photosynthesis, dark reaction	0.00E+00
4	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
5	GO:0009902: chloroplast relocation	4.21E-06
6	GO:0009657: plastid organization	3.64E-05
7	GO:1904966: positive regulation of vitamin E biosynthetic process	6.42E-05
8	GO:1904964: positive regulation of phytol biosynthetic process	6.42E-05
9	GO:0010362: negative regulation of anion channel activity by blue light	6.42E-05
10	GO:0010207: photosystem II assembly	1.23E-04
11	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.55E-04
12	GO:0006435: threonyl-tRNA aminoacylation	1.55E-04
13	GO:0080005: photosystem stoichiometry adjustment	1.55E-04
14	GO:0048314: embryo sac morphogenesis	1.55E-04
15	GO:0030187: melatonin biosynthetic process	1.55E-04
16	GO:0000256: allantoin catabolic process	1.55E-04
17	GO:0009405: pathogenesis	2.63E-04
18	GO:0006013: mannose metabolic process	2.63E-04
19	GO:0010136: ureide catabolic process	2.63E-04
20	GO:0009793: embryo development ending in seed dormancy	3.70E-04
21	GO:0006145: purine nucleobase catabolic process	3.82E-04
22	GO:0046739: transport of virus in multicellular host	3.82E-04
23	GO:2001141: regulation of RNA biosynthetic process	3.82E-04
24	GO:0009765: photosynthesis, light harvesting	5.10E-04
25	GO:0016120: carotene biosynthetic process	6.45E-04
26	GO:0016123: xanthophyll biosynthetic process	6.45E-04
27	GO:0018298: protein-chromophore linkage	8.14E-04
28	GO:0010189: vitamin E biosynthetic process	9.40E-04
29	GO:0071470: cellular response to osmotic stress	9.40E-04
30	GO:0048528: post-embryonic root development	1.10E-03
31	GO:1900056: negative regulation of leaf senescence	1.10E-03
32	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.26E-03
33	GO:0009642: response to light intensity	1.26E-03
34	GO:0048564: photosystem I assembly	1.26E-03
35	GO:0071482: cellular response to light stimulus	1.44E-03
36	GO:0010380: regulation of chlorophyll biosynthetic process	1.81E-03
37	GO:0009638: phototropism	1.81E-03
38	GO:0045036: protein targeting to chloroplast	2.01E-03
39	GO:0006415: translational termination	2.21E-03
40	GO:0006352: DNA-templated transcription, initiation	2.21E-03
41	GO:0006396: RNA processing	2.52E-03
42	GO:0090351: seedling development	3.09E-03
43	GO:0006413: translational initiation	3.92E-03
44	GO:0051321: meiotic cell cycle	4.08E-03
45	GO:0016117: carotenoid biosynthetic process	5.15E-03
46	GO:0006457: protein folding	5.25E-03
47	GO:0010118: stomatal movement	5.43E-03
48	GO:0071472: cellular response to salt stress	5.72E-03
49	GO:0009791: post-embryonic development	6.31E-03
50	GO:0008654: phospholipid biosynthetic process	6.31E-03
51	GO:0009658: chloroplast organization	6.48E-03
52	GO:0016032: viral process	6.92E-03
53	GO:0010027: thylakoid membrane organization	8.54E-03
54	GO:0046777: protein autophosphorylation	8.59E-03
55	GO:0009816: defense response to bacterium, incompatible interaction	8.88E-03
56	GO:0015979: photosynthesis	9.17E-03
57	GO:0015995: chlorophyll biosynthetic process	9.57E-03
58	GO:0000160: phosphorelay signal transduction system	1.07E-02
59	GO:0007568: aging	1.14E-02
60	GO:0009910: negative regulation of flower development	1.14E-02
61	GO:0000724: double-strand break repair via homologous recombination	1.18E-02
62	GO:0009637: response to blue light	1.22E-02
63	GO:0009853: photorespiration	1.22E-02
64	GO:0010114: response to red light	1.45E-02
65	GO:0046686: response to cadmium ion	1.63E-02
66	GO:0031347: regulation of defense response	1.66E-02
67	GO:0006364: rRNA processing	1.80E-02
68	GO:0006417: regulation of translation	1.93E-02
69	GO:0009735: response to cytokinin	1.93E-02
70	GO:0035556: intracellular signal transduction	2.23E-02
71	GO:0009553: embryo sac development	2.26E-02
72	GO:0055114: oxidation-reduction process	2.29E-02
73	GO:0055085: transmembrane transport	2.68E-02
74	GO:0007623: circadian rhythm	3.41E-02
75	GO:0010228: vegetative to reproductive phase transition of meristem	3.52E-02
76	GO:0010468: regulation of gene expression	3.86E-02
77	GO:0042254: ribosome biogenesis	4.71E-02
78	GO:0006970: response to osmotic stress	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
2	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
3	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
4	GO:0010276: phytol kinase activity	0.00E+00
5	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
6	GO:0004059: aralkylamine N-acetyltransferase activity	0.00E+00
7	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	6.42E-05
8	GO:0030941: chloroplast targeting sequence binding	6.42E-05
9	GO:0004829: threonine-tRNA ligase activity	1.55E-04
10	GO:0004148: dihydrolipoyl dehydrogenase activity	2.63E-04
11	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	2.63E-04
12	GO:0008080: N-acetyltransferase activity	3.58E-04
13	GO:0016851: magnesium chelatase activity	3.82E-04
14	GO:0016149: translation release factor activity, codon specific	3.82E-04
15	GO:0009882: blue light photoreceptor activity	3.82E-04
16	GO:0010181: FMN binding	3.85E-04
17	GO:0043495: protein anchor	5.10E-04
18	GO:0001053: plastid sigma factor activity	5.10E-04
19	GO:0051861: glycolipid binding	5.10E-04
20	GO:0008453: alanine-glyoxylate transaminase activity	5.10E-04
21	GO:0016987: sigma factor activity	5.10E-04
22	GO:0004605: phosphatidate cytidylyltransferase activity	7.90E-04
23	GO:0004559: alpha-mannosidase activity	9.40E-04
24	GO:0019899: enzyme binding	1.10E-03
25	GO:0003747: translation release factor activity	1.62E-03
26	GO:0045309: protein phosphorylated amino acid binding	1.81E-03
27	GO:0019904: protein domain specific binding	2.21E-03
28	GO:0000155: phosphorelay sensor kinase activity	2.64E-03
29	GO:0016491: oxidoreductase activity	2.87E-03
30	GO:0004176: ATP-dependent peptidase activity	4.08E-03
31	GO:0022891: substrate-specific transmembrane transporter activity	4.60E-03
32	GO:0003727: single-stranded RNA binding	4.87E-03
33	GO:0042802: identical protein binding	5.33E-03
34	GO:0048038: quinone binding	6.61E-03
35	GO:0016168: chlorophyll binding	8.88E-03
36	GO:0050897: cobalt ion binding	1.14E-02
37	GO:0043621: protein self-association	1.54E-02
38	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.80E-02
39	GO:0031625: ubiquitin protein ligase binding	1.93E-02
40	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.76E-02
41	GO:0005507: copper ion binding	3.01E-02
42	GO:0003743: translation initiation factor activity	3.80E-02
43	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.04E-02
44	GO:0003723: RNA binding	4.12E-02
45	GO:0008168: methyltransferase activity	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	8.97E-21
2	GO:0009941: chloroplast envelope	1.31E-05
3	GO:0009570: chloroplast stroma	4.33E-05
4	GO:0009707: chloroplast outer membrane	4.69E-05
5	GO:0009535: chloroplast thylakoid membrane	6.00E-05
6	GO:0031969: chloroplast membrane	1.39E-04
7	GO:0010007: magnesium chelatase complex	2.63E-04
8	GO:0031359: integral component of chloroplast outer membrane	1.10E-03
9	GO:0031977: thylakoid lumen	1.20E-03
10	GO:0048471: perinuclear region of cytoplasm	2.21E-03
11	GO:0009543: chloroplast thylakoid lumen	3.06E-03
12	GO:0042651: thylakoid membrane	3.82E-03
13	GO:0009534: chloroplast thylakoid	4.81E-03
14	GO:0009523: photosystem II	6.31E-03
15	GO:0009536: plastid	1.20E-02
16	GO:0005747: mitochondrial respiratory chain complex I	2.07E-02
17	GO:0009706: chloroplast inner membrane	2.31E-02
18	GO:0005623: cell	2.76E-02
19	GO:0005759: mitochondrial matrix	3.19E-02
20	GO:0048046: apoplast	4.67E-02
21	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.96E-02