Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G35920

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080127: fruit septum development0.00E+00
2GO:0006399: tRNA metabolic process0.00E+00
3GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
4GO:0000476: maturation of 4.5S rRNA2.64E-05
5GO:0000967: rRNA 5'-end processing2.64E-05
6GO:0000481: maturation of 5S rRNA2.64E-05
7GO:0065002: intracellular protein transmembrane transport2.64E-05
8GO:0043007: maintenance of rDNA2.64E-05
9GO:0034337: RNA folding2.64E-05
10GO:0043953: protein transport by the Tat complex2.64E-05
11GO:0034470: ncRNA processing6.72E-05
12GO:0006954: inflammatory response1.18E-04
13GO:0005977: glycogen metabolic process1.18E-04
14GO:2001141: regulation of RNA biosynthetic process1.76E-04
15GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.76E-04
16GO:0010021: amylopectin biosynthetic process2.39E-04
17GO:0003006: developmental process involved in reproduction3.78E-04
18GO:0042549: photosystem II stabilization3.78E-04
19GO:0032508: DNA duplex unwinding6.10E-04
20GO:0071482: cellular response to light stimulus6.94E-04
21GO:0048507: meristem development7.80E-04
22GO:0010205: photoinhibition8.68E-04
23GO:0019684: photosynthesis, light reaction1.05E-03
24GO:0009089: lysine biosynthetic process via diaminopimelate1.05E-03
25GO:0006352: DNA-templated transcription, initiation1.05E-03
26GO:0009684: indoleacetic acid biosynthetic process1.05E-03
27GO:0010582: floral meristem determinacy1.15E-03
28GO:0048467: gynoecium development1.35E-03
29GO:0010030: positive regulation of seed germination1.45E-03
30GO:0048511: rhythmic process1.90E-03
31GO:0071369: cellular response to ethylene stimulus2.14E-03
32GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.39E-03
33GO:0042631: cellular response to water deprivation2.52E-03
34GO:0006520: cellular amino acid metabolic process2.65E-03
35GO:0042752: regulation of circadian rhythm2.78E-03
36GO:0019252: starch biosynthetic process2.91E-03
37GO:0015979: photosynthesis2.96E-03
38GO:0032502: developmental process3.19E-03
39GO:0009567: double fertilization forming a zygote and endosperm3.47E-03
40GO:0010027: thylakoid membrane organization3.91E-03
41GO:0016311: dephosphorylation4.53E-03
42GO:0006499: N-terminal protein myristoylation5.02E-03
43GO:0009637: response to blue light5.52E-03
44GO:0009793: embryo development ending in seed dormancy6.26E-03
45GO:0010114: response to red light6.57E-03
46GO:0051707: response to other organism6.57E-03
47GO:0009664: plant-type cell wall organization7.69E-03
48GO:0006096: glycolytic process9.08E-03
49GO:0009658: chloroplast organization2.07E-02
50GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.48E-02
51GO:0045454: cell redox homeostasis2.75E-02
52GO:0009737: response to abscisic acid2.92E-02
53GO:0032259: methylation3.10E-02
54GO:0006281: DNA repair3.19E-02
55GO:0009555: pollen development4.80E-02
RankGO TermAdjusted P value
1GO:0043864: indoleacetamide hydrolase activity0.00E+00
2GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
3GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
4GO:0019156: isoamylase activity6.72E-05
5GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase6.72E-05
6GO:0009977: proton motive force dependent protein transmembrane transporter activity6.72E-05
7GO:0030385: ferredoxin:thioredoxin reductase activity6.72E-05
8GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity1.76E-04
9GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.39E-04
10GO:0001053: plastid sigma factor activity2.39E-04
11GO:0016987: sigma factor activity2.39E-04
12GO:0004040: amidase activity3.07E-04
13GO:0004556: alpha-amylase activity3.78E-04
14GO:0005096: GTPase activator activity4.85E-03
15GO:0030145: manganese ion binding5.18E-03
16GO:0003993: acid phosphatase activity5.69E-03
17GO:0043621: protein self-association6.94E-03
18GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.31E-03
19GO:0003899: DNA-directed 5'-3' RNA polymerase activity8.08E-03
20GO:0008026: ATP-dependent helicase activity1.08E-02
21GO:0008017: microtubule binding1.57E-02
22GO:0008168: methyltransferase activity2.02E-02
23GO:0003723: RNA binding2.91E-02
24GO:0004722: protein serine/threonine phosphatase activity2.94E-02
RankGO TermAdjusted P value
1GO:0010368: chloroplast isoamylase complex0.00E+00
2GO:0043235: receptor complex0.00E+00
3GO:0009507: chloroplast3.95E-11
4GO:0031361: integral component of thylakoid membrane2.64E-05
5GO:0033281: TAT protein transport complex1.18E-04
6GO:0009531: secondary cell wall1.76E-04
7GO:0009535: chloroplast thylakoid membrane1.85E-04
8GO:0009570: chloroplast stroma2.75E-04
9GO:0009533: chloroplast stromal thylakoid5.30E-04
10GO:0009538: photosystem I reaction center6.10E-04
11GO:0055028: cortical microtubule9.59E-04
12GO:0009543: chloroplast thylakoid lumen1.01E-03
13GO:0009579: thylakoid1.12E-03
14GO:0009534: chloroplast thylakoid1.14E-03
15GO:0032040: small-subunit processome1.15E-03
16GO:0030095: chloroplast photosystem II1.35E-03
17GO:0009523: photosystem II2.91E-03
18GO:0009941: chloroplast envelope3.41E-03
19GO:0031977: thylakoid lumen6.21E-03
20GO:0010287: plastoglobule1.17E-02
21GO:0005874: microtubule2.36E-02
22GO:0022626: cytosolic ribosome4.65E-02
<
Gene type



Gene DE type