co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G35480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035264: multicellular organism growth	0.00E+00
2	GO:0071289: cellular response to nickel ion	0.00E+00
3	GO:0007141: male meiosis I	0.00E+00
4	GO:0010200: response to chitin	3.36E-13
5	GO:0009873: ethylene-activated signaling pathway	1.25E-05
6	GO:2000070: regulation of response to water deprivation	1.23E-04
7	GO:0051180: vitamin transport	1.64E-04
8	GO:0030974: thiamine pyrophosphate transport	1.64E-04
9	GO:0050691: regulation of defense response to virus by host	1.64E-04
10	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	1.64E-04
11	GO:0009611: response to wounding	2.29E-04
12	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.54E-04
13	GO:0009737: response to abscisic acid	3.55E-04
14	GO:0015709: thiosulfate transport	3.73E-04
15	GO:0071422: succinate transmembrane transport	3.73E-04
16	GO:0015893: drug transport	3.73E-04
17	GO:0080168: abscisic acid transport	6.11E-04
18	GO:0042344: indole glucosinolate catabolic process	6.11E-04
19	GO:0051176: positive regulation of sulfur metabolic process	6.11E-04
20	GO:0009695: jasmonic acid biosynthetic process	6.90E-04
21	GO:0009269: response to desiccation	7.57E-04
22	GO:0030433: ubiquitin-dependent ERAD pathway	8.26E-04
23	GO:0033014: tetrapyrrole biosynthetic process	8.73E-04
24	GO:0015696: ammonium transport	8.73E-04
25	GO:0034219: carbohydrate transmembrane transport	8.73E-04
26	GO:0015729: oxaloacetate transport	8.73E-04
27	GO:0030100: regulation of endocytosis	8.73E-04
28	GO:0010107: potassium ion import	1.16E-03
29	GO:0072488: ammonium transmembrane transport	1.16E-03
30	GO:0006536: glutamate metabolic process	1.16E-03
31	GO:0045892: negative regulation of transcription, DNA-templated	1.42E-03
32	GO:0010117: photoprotection	1.47E-03
33	GO:0009435: NAD biosynthetic process	1.47E-03
34	GO:0009164: nucleoside catabolic process	1.47E-03
35	GO:0071423: malate transmembrane transport	1.47E-03
36	GO:0009409: response to cold	1.69E-03
37	GO:0006796: phosphate-containing compound metabolic process	1.80E-03
38	GO:0010337: regulation of salicylic acid metabolic process	1.80E-03
39	GO:0048232: male gamete generation	1.80E-03
40	GO:0035435: phosphate ion transmembrane transport	1.80E-03
41	GO:0009423: chorismate biosynthetic process	2.17E-03
42	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.55E-03
43	GO:0006955: immune response	2.55E-03
44	GO:0008272: sulfate transport	2.55E-03
45	GO:0009415: response to water	2.95E-03
46	GO:1900150: regulation of defense response to fungus	2.95E-03
47	GO:0017004: cytochrome complex assembly	3.37E-03
48	GO:0042742: defense response to bacterium	3.58E-03
49	GO:0051865: protein autoubiquitination	3.81E-03
50	GO:0006783: heme biosynthetic process	3.81E-03
51	GO:0009060: aerobic respiration	3.81E-03
52	GO:0098656: anion transmembrane transport	3.81E-03
53	GO:0006839: mitochondrial transport	4.01E-03
54	GO:2000280: regulation of root development	4.27E-03
55	GO:0006779: porphyrin-containing compound biosynthetic process	4.27E-03
56	GO:0000387: spliceosomal snRNP assembly	4.27E-03
57	GO:0000209: protein polyubiquitination	4.71E-03
58	GO:0006782: protoporphyrinogen IX biosynthetic process	4.75E-03
59	GO:0051026: chiasma assembly	4.75E-03
60	GO:0009644: response to high light intensity	4.90E-03
61	GO:0009073: aromatic amino acid family biosynthetic process	5.25E-03
62	GO:0010015: root morphogenesis	5.25E-03
63	GO:0009682: induced systemic resistance	5.25E-03
64	GO:0052544: defense response by callose deposition in cell wall	5.25E-03
65	GO:0002237: response to molecule of bacterial origin	6.85E-03
66	GO:0071732: cellular response to nitric oxide	7.41E-03
67	GO:0070588: calcium ion transmembrane transport	7.41E-03
68	GO:0009620: response to fungus	7.93E-03
69	GO:0009863: salicylic acid mediated signaling pathway	8.59E-03
70	GO:0009624: response to nematode	8.68E-03
71	GO:0009742: brassinosteroid mediated signaling pathway	9.21E-03
72	GO:0007017: microtubule-based process	9.21E-03
73	GO:0006952: defense response	9.87E-03
74	GO:0009651: response to salt stress	1.01E-02
75	GO:0016226: iron-sulfur cluster assembly	1.05E-02
76	GO:0007131: reciprocal meiotic recombination	1.05E-02
77	GO:0030245: cellulose catabolic process	1.05E-02
78	GO:0035428: hexose transmembrane transport	1.05E-02
79	GO:0071369: cellular response to ethylene stimulus	1.11E-02
80	GO:0010091: trichome branching	1.18E-02
81	GO:0045492: xylan biosynthetic process	1.18E-02
82	GO:0019722: calcium-mediated signaling	1.18E-02
83	GO:0009414: response to water deprivation	1.28E-02
84	GO:0010118: stomatal movement	1.32E-02
85	GO:0046323: glucose import	1.39E-02
86	GO:0009741: response to brassinosteroid	1.39E-02
87	GO:0006351: transcription, DNA-templated	1.45E-02
88	GO:0009749: response to glucose	1.54E-02
89	GO:0006470: protein dephosphorylation	1.72E-02
90	GO:0007166: cell surface receptor signaling pathway	1.72E-02
91	GO:1901657: glycosyl compound metabolic process	1.77E-02
92	GO:0071281: cellular response to iron ion	1.77E-02
93	GO:0009617: response to bacterium	1.80E-02
94	GO:0009738: abscisic acid-activated signaling pathway	1.85E-02
95	GO:0006310: DNA recombination	1.86E-02
96	GO:0019760: glucosinolate metabolic process	1.86E-02
97	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.19E-02
98	GO:0006810: transport	2.36E-02
99	GO:0015995: chlorophyll biosynthetic process	2.36E-02
100	GO:0006970: response to osmotic stress	2.51E-02
101	GO:0008219: cell death	2.54E-02
102	GO:0009817: defense response to fungus, incompatible interaction	2.54E-02
103	GO:0009723: response to ethylene	2.70E-02
104	GO:0006811: ion transport	2.72E-02
105	GO:0048527: lateral root development	2.82E-02
106	GO:0006355: regulation of transcription, DNA-templated	2.82E-02
107	GO:0009910: negative regulation of flower development	2.82E-02
108	GO:0009631: cold acclimation	2.82E-02
109	GO:0006897: endocytosis	3.40E-02
110	GO:0051707: response to other organism	3.60E-02
111	GO:0042546: cell wall biogenesis	3.70E-02
112	GO:0008643: carbohydrate transport	3.81E-02
113	GO:0006855: drug transmembrane transport	4.02E-02
114	GO:0006260: DNA replication	4.12E-02
115	GO:0031347: regulation of defense response	4.12E-02
116	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.12E-02
117	GO:0042538: hyperosmotic salinity response	4.23E-02
118	GO:0006364: rRNA processing	4.45E-02
119	GO:0010224: response to UV-B	4.56E-02
120	GO:0006979: response to oxidative stress	4.66E-02
121	GO:0006857: oligopeptide transport	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0015439: heme-transporting ATPase activity	0.00E+00
2	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
3	GO:0103115: protoheme IX ABC transporter activity	0.00E+00
4	GO:0008987: quinolinate synthetase A activity	0.00E+00
5	GO:0046423: allene-oxide cyclase activity	4.89E-06
6	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.64E-04
7	GO:0090422: thiamine pyrophosphate transporter activity	1.64E-04
8	GO:0015085: calcium ion transmembrane transporter activity	1.64E-04
9	GO:0090440: abscisic acid transporter activity	1.64E-04
10	GO:0036002: pre-mRNA binding	3.73E-04
11	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	3.73E-04
12	GO:1901677: phosphate transmembrane transporter activity	3.73E-04
13	GO:0008883: glutamyl-tRNA reductase activity	3.73E-04
14	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	3.73E-04
15	GO:0015117: thiosulfate transmembrane transporter activity	3.73E-04
16	GO:0005310: dicarboxylic acid transmembrane transporter activity	6.11E-04
17	GO:0015141: succinate transmembrane transporter activity	6.11E-04
18	GO:0015131: oxaloacetate transmembrane transporter activity	8.73E-04
19	GO:0004351: glutamate decarboxylase activity	8.73E-04
20	GO:0018685: alkane 1-monooxygenase activity	1.47E-03
21	GO:0047631: ADP-ribose diphosphatase activity	1.47E-03
22	GO:0017070: U6 snRNA binding	1.47E-03
23	GO:0009922: fatty acid elongase activity	1.47E-03
24	GO:0000210: NAD+ diphosphatase activity	1.80E-03
25	GO:0019137: thioglucosidase activity	1.80E-03
26	GO:0016462: pyrophosphatase activity	1.80E-03
27	GO:0008519: ammonium transmembrane transporter activity	1.80E-03
28	GO:0035673: oligopeptide transmembrane transporter activity	1.80E-03
29	GO:0005516: calmodulin binding	2.13E-03
30	GO:0019900: kinase binding	2.17E-03
31	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.17E-03
32	GO:0015297: antiporter activity	2.34E-03
33	GO:0102483: scopolin beta-glucosidase activity	2.52E-03
34	GO:0008143: poly(A) binding	2.55E-03
35	GO:0004427: inorganic diphosphatase activity	2.55E-03
36	GO:0015140: malate transmembrane transporter activity	2.55E-03
37	GO:0043565: sequence-specific DNA binding	2.93E-03
38	GO:0005509: calcium ion binding	3.11E-03
39	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.21E-03
40	GO:0004430: 1-phosphatidylinositol 4-kinase activity	3.37E-03
41	GO:0003678: DNA helicase activity	3.81E-03
42	GO:0008422: beta-glucosidase activity	3.84E-03
43	GO:0008047: enzyme activator activity	4.75E-03
44	GO:0004713: protein tyrosine kinase activity	4.75E-03
45	GO:0015198: oligopeptide transporter activity	5.77E-03
46	GO:0015116: sulfate transmembrane transporter activity	5.77E-03
47	GO:0005315: inorganic phosphate transmembrane transporter activity	6.30E-03
48	GO:0019888: protein phosphatase regulator activity	6.30E-03
49	GO:0005388: calcium-transporting ATPase activity	6.30E-03
50	GO:0003700: transcription factor activity, sequence-specific DNA binding	6.63E-03
51	GO:0031625: ubiquitin protein ligase binding	6.75E-03
52	GO:0051119: sugar transmembrane transporter activity	7.41E-03
53	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	8.00E-03
54	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	8.00E-03
55	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	8.00E-03
56	GO:0043424: protein histidine kinase binding	9.21E-03
57	GO:0008514: organic anion transmembrane transporter activity	1.18E-02
58	GO:0015144: carbohydrate transmembrane transporter activity	1.30E-02
59	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.40E-02
60	GO:0005355: glucose transmembrane transporter activity	1.47E-02
61	GO:0005351: sugar:proton symporter activity	1.47E-02
62	GO:0005200: structural constituent of cytoskeleton	1.94E-02
63	GO:0004721: phosphoprotein phosphatase activity	2.36E-02
64	GO:0004806: triglyceride lipase activity	2.36E-02
65	GO:0015238: drug transmembrane transporter activity	2.63E-02
66	GO:0050660: flavin adenine dinucleotide binding	2.70E-02
67	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.73E-02
68	GO:0061630: ubiquitin protein ligase activity	3.04E-02
69	GO:0050661: NADP binding	3.30E-02
70	GO:0051539: 4 iron, 4 sulfur cluster binding	3.30E-02
71	GO:0004722: protein serine/threonine phosphatase activity	3.79E-02
72	GO:0009055: electron carrier activity	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0071007: U2-type catalytic step 2 spliceosome	3.73E-04
2	GO:0071006: U2-type catalytic step 1 spliceosome	8.73E-04
3	GO:0005886: plasma membrane	1.76E-03
4	GO:0000974: Prp19 complex	1.80E-03
5	GO:0010494: cytoplasmic stress granule	3.81E-03
6	GO:0045298: tubulin complex	3.81E-03
7	GO:0016604: nuclear body	4.27E-03
8	GO:0000159: protein phosphatase type 2A complex	5.25E-03
9	GO:0005743: mitochondrial inner membrane	8.47E-03
10	GO:0005768: endosome	1.13E-02
11	GO:0000790: nuclear chromatin	1.25E-02
12	GO:0005770: late endosome	1.39E-02
13	GO:0010319: stromule	1.94E-02
14	GO:0046658: anchored component of plasma membrane	2.00E-02
15	GO:0019005: SCF ubiquitin ligase complex	2.54E-02
16	GO:0009506: plasmodesma	2.63E-02
17	GO:0031902: late endosome membrane	3.40E-02
18	GO:0090406: pollen tube	3.60E-02