co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G34980

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0042493: response to drug	0.00E+00
3	GO:0061157: mRNA destabilization	0.00E+00
4	GO:0045014: negative regulation of transcription by glucose	0.00E+00
5	GO:0005992: trehalose biosynthetic process	2.99E-05
6	GO:0009786: regulation of asymmetric cell division	4.85E-05
7	GO:0009650: UV protection	1.30E-04
8	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.30E-04
9	GO:0022622: root system development	1.78E-04
10	GO:0003006: developmental process involved in reproduction	2.85E-04
11	GO:0009942: longitudinal axis specification	3.42E-04
12	GO:0032880: regulation of protein localization	4.02E-04
13	GO:0070413: trehalose metabolism in response to stress	4.64E-04
14	GO:0007389: pattern specification process	5.27E-04
15	GO:0048589: developmental growth	5.93E-04
16	GO:0048507: meristem development	5.93E-04
17	GO:0048829: root cap development	7.30E-04
18	GO:0006949: syncytium formation	7.30E-04
19	GO:0010152: pollen maturation	8.75E-04
20	GO:0010582: floral meristem determinacy	8.75E-04
21	GO:0045490: pectin catabolic process	9.17E-04
22	GO:2000012: regulation of auxin polar transport	9.49E-04
23	GO:0010207: photosystem II assembly	1.02E-03
24	GO:0048467: gynoecium development	1.02E-03
25	GO:0010030: positive regulation of seed germination	1.10E-03
26	GO:0048511: rhythmic process	1.44E-03
27	GO:0009411: response to UV	1.61E-03
28	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.61E-03
29	GO:0048443: stamen development	1.70E-03
30	GO:0006284: base-excision repair	1.70E-03
31	GO:0008284: positive regulation of cell proliferation	1.80E-03
32	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.80E-03
33	GO:0042631: cellular response to water deprivation	1.89E-03
34	GO:0009958: positive gravitropism	1.99E-03
35	GO:0042752: regulation of circadian rhythm	2.09E-03
36	GO:0010583: response to cyclopentenone	2.40E-03
37	GO:0006281: DNA repair	2.50E-03
38	GO:0009828: plant-type cell wall loosening	2.61E-03
39	GO:0010252: auxin homeostasis	2.61E-03
40	GO:0048364: root development	2.61E-03
41	GO:0007165: signal transduction	3.16E-03
42	GO:0010311: lateral root formation	3.63E-03
43	GO:0048527: lateral root development	3.88E-03
44	GO:0009926: auxin polar transport	4.91E-03
45	GO:0009664: plant-type cell wall organization	5.74E-03
46	GO:0051603: proteolysis involved in cellular protein catabolic process	6.17E-03
47	GO:0006952: defense response	1.10E-02
48	GO:0007166: cell surface receptor signaling pathway	1.24E-02
49	GO:0009826: unidimensional cell growth	1.50E-02
50	GO:0080167: response to karrikin	1.79E-02
51	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.83E-02
52	GO:0044550: secondary metabolite biosynthetic process	1.90E-02
53	GO:0015979: photosynthesis	1.97E-02
54	GO:0045892: negative regulation of transcription, DNA-templated	2.06E-02
55	GO:0008152: metabolic process	2.53E-02
56	GO:0016567: protein ubiquitination	2.72E-02
57	GO:0009734: auxin-activated signaling pathway	3.01E-02
58	GO:0009416: response to light stimulus	3.55E-02
59	GO:0055085: transmembrane transport	4.21E-02
60	GO:0006511: ubiquitin-dependent protein catabolic process	4.42E-02
61	GO:0006355: regulation of transcription, DNA-templated	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0004805: trehalose-phosphatase activity	1.01E-05
2	GO:0030570: pectate lyase activity	4.67E-05
3	GO:0010011: auxin binding	1.78E-04
4	GO:0019199: transmembrane receptor protein kinase activity	1.78E-04
5	GO:0008725: DNA-3-methyladenine glycosylase activity	2.30E-04
6	GO:0009672: auxin:proton symporter activity	6.61E-04
7	GO:0015020: glucuronosyltransferase activity	7.30E-04
8	GO:0010329: auxin efflux transmembrane transporter activity	9.49E-04
9	GO:0008083: growth factor activity	1.02E-03
10	GO:0003727: single-stranded RNA binding	1.70E-03
11	GO:0016791: phosphatase activity	2.61E-03
12	GO:0004185: serine-type carboxypeptidase activity	4.91E-03
13	GO:0043621: protein self-association	5.18E-03
14	GO:0080043: quercetin 3-O-glucosyltransferase activity	7.22E-03
15	GO:0080044: quercetin 7-O-glucosyltransferase activity	7.22E-03
16	GO:0016758: transferase activity, transferring hexosyl groups	8.83E-03
17	GO:0016829: lyase activity	9.51E-03
18	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.07E-02
19	GO:0008194: UDP-glycosyltransferase activity	1.22E-02
20	GO:0042803: protein homodimerization activity	2.10E-02
21	GO:0004871: signal transducer activity	2.10E-02
22	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.15E-02
23	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.37E-02
24	GO:0005515: protein binding	3.00E-02
25	GO:0000166: nucleotide binding	3.55E-02
26	GO:0046872: metal ion binding	3.83E-02
27	GO:0004674: protein serine/threonine kinase activity	4.39E-02
28	GO:0019825: oxygen binding	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0030139: endocytic vesicle	8.61E-05
3	GO:0032585: multivesicular body membrane	1.30E-04
4	GO:0009986: cell surface	4.02E-04
5	GO:0009538: photosystem I reaction center	4.64E-04
6	GO:0016020: membrane	7.26E-03
7	GO:0005615: extracellular space	1.22E-02
8	GO:0043231: intracellular membrane-bounded organelle	2.53E-02
9	GO:0005886: plasma membrane	3.13E-02
10	GO:0005618: cell wall	3.54E-02
11	GO:0009579: thylakoid	4.04E-02
12	GO:0009534: chloroplast thylakoid	4.07E-02