co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G34620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0005996: monosaccharide metabolic process	0.00E+00
2	GO:0015979: photosynthesis	2.38E-21
3	GO:0009773: photosynthetic electron transport in photosystem I	2.52E-09
4	GO:0019253: reductive pentose-phosphate cycle	5.33E-09
5	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	2.87E-08
6	GO:0010218: response to far red light	2.10E-07
7	GO:0015977: carbon fixation	2.32E-07
8	GO:0009637: response to blue light	2.71E-07
9	GO:0010114: response to red light	4.30E-07
10	GO:0018119: peptidyl-cysteine S-nitrosylation	1.46E-06
11	GO:0009768: photosynthesis, light harvesting in photosystem I	4.34E-06
12	GO:0009409: response to cold	1.07E-05
13	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.33E-05
14	GO:0006000: fructose metabolic process	2.46E-05
15	GO:0018298: protein-chromophore linkage	2.68E-05
16	GO:0009853: photorespiration	3.56E-05
17	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	3.83E-05
18	GO:0006109: regulation of carbohydrate metabolic process	5.40E-05
19	GO:0045727: positive regulation of translation	5.40E-05
20	GO:0042549: photosystem II stabilization	9.04E-05
21	GO:0009645: response to low light intensity stimulus	1.32E-04
22	GO:0010196: nonphotochemical quenching	1.32E-04
23	GO:0009642: response to light intensity	1.54E-04
24	GO:0032544: plastid translation	1.78E-04
25	GO:0006002: fructose 6-phosphate metabolic process	1.78E-04
26	GO:0019684: photosynthesis, light reaction	2.79E-04
27	GO:0043085: positive regulation of catalytic activity	2.79E-04
28	GO:0000272: polysaccharide catabolic process	2.79E-04
29	GO:0006094: gluconeogenesis	3.33E-04
30	GO:0005986: sucrose biosynthetic process	3.33E-04
31	GO:0010207: photosystem II assembly	3.61E-04
32	GO:0005985: sucrose metabolic process	3.90E-04
33	GO:0042631: cellular response to water deprivation	6.67E-04
34	GO:0006662: glycerol ether metabolic process	7.00E-04
35	GO:0009735: response to cytokinin	8.23E-04
36	GO:0034599: cellular response to oxidative stress	1.44E-03
37	GO:0009644: response to high light intensity	1.75E-03
38	GO:0042742: defense response to bacterium	1.75E-03
39	GO:0006364: rRNA processing	2.02E-03
40	GO:0043086: negative regulation of catalytic activity	2.26E-03
41	GO:0007623: circadian rhythm	3.71E-03
42	GO:0010468: regulation of gene expression	4.18E-03
43	GO:0009658: chloroplast organization	4.99E-03
44	GO:0042254: ribosome biogenesis	5.05E-03
45	GO:0045454: cell redox homeostasis	6.55E-03
46	GO:0055114: oxidation-reduction process	1.14E-02
47	GO:0009611: response to wounding	1.15E-02
48	GO:0045893: positive regulation of transcription, DNA-templated	1.25E-02
49	GO:0006810: transport	2.46E-02

Rank	GO Term	Adjusted P value
1	GO:0016984: ribulose-bisphosphate carboxylase activity	2.87E-08
2	GO:0016168: chlorophyll binding	1.19E-07
3	GO:0031409: pigment binding	3.32E-06
4	GO:0010297: heteropolysaccharide binding	1.33E-05
5	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.33E-05
6	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	5.40E-05
7	GO:0019843: rRNA binding	1.29E-04
8	GO:0008047: enzyme activator activity	2.53E-04
9	GO:0004497: monooxygenase activity	3.54E-04
10	GO:0008266: poly(U) RNA binding	3.61E-04
11	GO:0004857: enzyme inhibitor activity	4.48E-04
12	GO:0047134: protein-disulfide reductase activity	6.34E-04
13	GO:0050662: coenzyme binding	7.34E-04
14	GO:0004791: thioredoxin-disulfide reductase activity	7.34E-04
15	GO:0048038: quinone binding	8.02E-04
16	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	8.71E-04
17	GO:0005509: calcium ion binding	1.62E-03
18	GO:0015035: protein disulfide oxidoreductase activity	2.61E-03
19	GO:0046872: metal ion binding	1.43E-02
20	GO:0005507: copper ion binding	1.46E-02
21	GO:0005516: calmodulin binding	1.51E-02
22	GO:0003824: catalytic activity	2.00E-02
23	GO:0003735: structural constituent of ribosome	3.05E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	0.00E+00
2	GO:0009579: thylakoid	1.07E-16
3	GO:0009535: chloroplast thylakoid membrane	3.96E-16
4	GO:0009534: chloroplast thylakoid	2.08E-14
5	GO:0009941: chloroplast envelope	1.02E-10
6	GO:0009522: photosystem I	1.05E-10
7	GO:0009570: chloroplast stroma	3.94E-10
8	GO:0009573: chloroplast ribulose bisphosphate carboxylase complex	1.16E-08
9	GO:0010287: plastoglobule	1.39E-08
10	GO:0048046: apoplast	1.02E-07
11	GO:0031977: thylakoid lumen	3.71E-07
12	GO:0016020: membrane	1.47E-06
13	GO:0009543: chloroplast thylakoid lumen	2.06E-06
14	GO:0030095: chloroplast photosystem II	2.46E-06
15	GO:0030076: light-harvesting complex	2.86E-06
16	GO:0042651: thylakoid membrane	4.34E-06
17	GO:0009654: photosystem II oxygen evolving complex	4.34E-06
18	GO:0009782: photosystem I antenna complex	4.83E-06
19	GO:0009783: photosystem II antenna complex	4.83E-06
20	GO:0019898: extrinsic component of membrane	1.12E-05
21	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.33E-05
22	GO:0030093: chloroplast photosystem I	1.33E-05
23	GO:0010319: stromule	1.68E-05
24	GO:0009517: PSII associated light-harvesting complex II	5.40E-05
25	GO:0009533: chloroplast stromal thylakoid	1.32E-04
26	GO:0009538: photosystem I reaction center	1.54E-04
27	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.02E-04
28	GO:0009508: plastid chromosome	3.33E-04
29	GO:0009523: photosystem II	7.68E-04
30	GO:0022626: cytosolic ribosome	8.59E-04
31	GO:0009295: nucleoid	9.42E-04
32	GO:0005840: ribosome	1.84E-03
33	GO:0005623: cell	3.03E-03
34	GO:0031969: chloroplast membrane	5.79E-03
35	GO:0005777: peroxisome	1.25E-02
36	GO:0009536: plastid	2.16E-02
37	GO:0016021: integral component of membrane	4.96E-02
38	GO:0005618: cell wall	5.00E-02