Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G34410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071475: cellular hyperosmotic salinity response0.00E+00
2GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
3GO:0080021: response to benzoic acid0.00E+00
4GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process0.00E+00
5GO:0019593: mannitol biosynthetic process0.00E+00
6GO:0070328: triglyceride homeostasis0.00E+00
7GO:0055091: phospholipid homeostasis0.00E+00
8GO:0034775: glutathione transmembrane transport0.00E+00
9GO:0010200: response to chitin1.22E-08
10GO:0009873: ethylene-activated signaling pathway2.82E-07
11GO:0009737: response to abscisic acid9.83E-06
12GO:0006355: regulation of transcription, DNA-templated9.98E-05
13GO:0035435: phosphate ion transmembrane transport2.23E-04
14GO:0006751: glutathione catabolic process2.23E-04
15GO:0009611: response to wounding2.84E-04
16GO:0009865: pollen tube adhesion4.13E-04
17GO:0050691: regulation of defense response to virus by host4.13E-04
18GO:0006680: glucosylceramide catabolic process4.13E-04
19GO:1902039: negative regulation of seed dormancy process4.13E-04
20GO:0090421: embryonic meristem initiation4.13E-04
21GO:0009609: response to symbiotic bacterium4.13E-04
22GO:1902265: abscisic acid homeostasis4.13E-04
23GO:0051180: vitamin transport4.13E-04
24GO:0046938: phytochelatin biosynthetic process4.13E-04
25GO:0030974: thiamine pyrophosphate transport4.13E-04
26GO:0009414: response to water deprivation4.64E-04
27GO:2000070: regulation of response to water deprivation4.85E-04
28GO:0009819: drought recovery4.85E-04
29GO:0042631: cellular response to water deprivation4.92E-04
30GO:0042538: hyperosmotic salinity response6.87E-04
31GO:0006351: transcription, DNA-templated7.07E-04
32GO:2000280: regulation of root development8.37E-04
33GO:0048838: release of seed from dormancy8.93E-04
34GO:0010507: negative regulation of autophagy8.93E-04
35GO:0015709: thiosulfate transport8.93E-04
36GO:0071422: succinate transmembrane transport8.93E-04
37GO:0031407: oxylipin metabolic process8.93E-04
38GO:0010289: homogalacturonan biosynthetic process8.93E-04
39GO:0055088: lipid homeostasis8.93E-04
40GO:0006898: receptor-mediated endocytosis8.93E-04
41GO:0015893: drug transport8.93E-04
42GO:1901679: nucleotide transmembrane transport8.93E-04
43GO:0015786: UDP-glucose transport8.93E-04
44GO:0009751: response to salicylic acid1.03E-03
45GO:0009409: response to cold1.09E-03
46GO:0000038: very long-chain fatty acid metabolic process1.12E-03
47GO:0052544: defense response by callose deposition in cell wall1.12E-03
48GO:0010029: regulation of seed germination1.21E-03
49GO:0080121: AMP transport1.45E-03
50GO:0016045: detection of bacterium1.45E-03
51GO:0046786: viral replication complex formation and maintenance1.45E-03
52GO:0010359: regulation of anion channel activity1.45E-03
53GO:0010288: response to lead ion1.45E-03
54GO:0090630: activation of GTPase activity1.45E-03
55GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid1.45E-03
56GO:0015783: GDP-fucose transport1.45E-03
57GO:0010325: raffinose family oligosaccharide biosynthetic process1.45E-03
58GO:0080168: abscisic acid transport1.45E-03
59GO:0042344: indole glucosinolate catabolic process1.45E-03
60GO:0044210: 'de novo' CTP biosynthetic process1.45E-03
61GO:0006970: response to osmotic stress1.58E-03
62GO:0010030: positive regulation of seed germination1.83E-03
63GO:0010025: wax biosynthetic process2.05E-03
64GO:0080024: indolebutyric acid metabolic process2.10E-03
65GO:0055089: fatty acid homeostasis2.10E-03
66GO:0010371: regulation of gibberellin biosynthetic process2.10E-03
67GO:0070301: cellular response to hydrogen peroxide2.10E-03
68GO:0015729: oxaloacetate transport2.10E-03
69GO:0072334: UDP-galactose transmembrane transport2.10E-03
70GO:0015700: arsenite transport2.10E-03
71GO:0009790: embryo development2.33E-03
72GO:0006839: mitochondrial transport2.52E-03
73GO:0006633: fatty acid biosynthetic process2.60E-03
74GO:0031408: oxylipin biosynthetic process2.75E-03
75GO:0015867: ATP transport2.82E-03
76GO:0042991: transcription factor import into nucleus2.82E-03
77GO:0009687: abscisic acid metabolic process2.82E-03
78GO:0046345: abscisic acid catabolic process2.82E-03
79GO:0009939: positive regulation of gibberellic acid mediated signaling pathway2.82E-03
80GO:0051365: cellular response to potassium ion starvation2.82E-03
81GO:0022622: root system development2.82E-03
82GO:0071585: detoxification of cadmium ion2.82E-03
83GO:0045490: pectin catabolic process3.01E-03
84GO:0006873: cellular ion homeostasis3.61E-03
85GO:0048497: maintenance of floral organ identity3.61E-03
86GO:0006665: sphingolipid metabolic process3.61E-03
87GO:0032957: inositol trisphosphate metabolic process3.61E-03
88GO:0009247: glycolipid biosynthetic process3.61E-03
89GO:0009697: salicylic acid biosynthetic process3.61E-03
90GO:0070897: DNA-templated transcriptional preinitiation complex assembly3.61E-03
91GO:0071423: malate transmembrane transport3.61E-03
92GO:0009823: cytokinin catabolic process3.61E-03
93GO:0006656: phosphatidylcholine biosynthetic process3.61E-03
94GO:0006470: protein dephosphorylation3.69E-03
95GO:0070417: cellular response to cold3.87E-03
96GO:0042335: cuticle development4.19E-03
97GO:0010337: regulation of salicylic acid metabolic process4.47E-03
98GO:0015866: ADP transport4.47E-03
99GO:0047484: regulation of response to osmotic stress4.47E-03
100GO:1900425: negative regulation of defense response to bacterium4.47E-03
101GO:0048868: pollen tube development4.52E-03
102GO:0045489: pectin biosynthetic process4.52E-03
103GO:0010016: shoot system morphogenesis5.38E-03
104GO:0098655: cation transmembrane transport5.38E-03
105GO:0010555: response to mannitol5.38E-03
106GO:1901001: negative regulation of response to salt stress5.38E-03
107GO:0045926: negative regulation of growth5.38E-03
108GO:2000033: regulation of seed dormancy process5.38E-03
109GO:0048367: shoot system development5.57E-03
110GO:0000302: response to reactive oxygen species5.58E-03
111GO:1902074: response to salt6.36E-03
112GO:0010103: stomatal complex morphogenesis6.36E-03
113GO:0032880: regulation of protein localization6.36E-03
114GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.36E-03
115GO:0006955: immune response6.36E-03
116GO:0030497: fatty acid elongation6.36E-03
117GO:0008272: sulfate transport6.36E-03
118GO:0042545: cell wall modification6.52E-03
119GO:0019760: glucosinolate metabolic process6.77E-03
120GO:0009690: cytokinin metabolic process7.40E-03
121GO:0019375: galactolipid biosynthetic process7.40E-03
122GO:0009415: response to water7.40E-03
123GO:0007155: cell adhesion7.40E-03
124GO:0009061: anaerobic respiration7.40E-03
125GO:0009938: negative regulation of gibberellic acid mediated signaling pathway7.40E-03
126GO:0009880: embryonic pattern specification8.49E-03
127GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.56E-03
128GO:0006468: protein phosphorylation9.50E-03
129GO:0001708: cell fate specification9.65E-03
130GO:0098656: anion transmembrane transport9.65E-03
131GO:0046685: response to arsenic-containing substance9.65E-03
132GO:0006098: pentose-phosphate shunt9.65E-03
133GO:0090305: nucleic acid phosphodiester bond hydrolysis9.65E-03
134GO:0007346: regulation of mitotic cell cycle1.09E-02
135GO:0042761: very long-chain fatty acid biosynthetic process1.09E-02
136GO:0048268: clathrin coat assembly1.09E-02
137GO:0006811: ion transport1.17E-02
138GO:0055062: phosphate ion homeostasis1.21E-02
139GO:0009631: cold acclimation1.22E-02
140GO:0071555: cell wall organization1.32E-02
141GO:0016051: carbohydrate biosynthetic process1.34E-02
142GO:0030148: sphingolipid biosynthetic process1.34E-02
143GO:0010015: root morphogenesis1.34E-02
144GO:0009698: phenylpropanoid metabolic process1.34E-02
145GO:0010105: negative regulation of ethylene-activated signaling pathway1.48E-02
146GO:0000266: mitochondrial fission1.48E-02
147GO:0006631: fatty acid metabolic process1.60E-02
148GO:0007166: cell surface receptor signaling pathway1.61E-02
149GO:0050826: response to freezing1.62E-02
150GO:0018107: peptidyl-threonine phosphorylation1.62E-02
151GO:0005986: sucrose biosynthetic process1.62E-02
152GO:2000012: regulation of auxin polar transport1.62E-02
153GO:0030048: actin filament-based movement1.62E-02
154GO:0055085: transmembrane transport1.65E-02
155GO:0010468: regulation of gene expression1.70E-02
156GO:0051707: response to other organism1.74E-02
157GO:0048467: gynoecium development1.76E-02
158GO:0002237: response to molecule of bacterial origin1.76E-02
159GO:0070588: calcium ion transmembrane transport1.91E-02
160GO:0010167: response to nitrate1.91E-02
161GO:0006855: drug transmembrane transport2.03E-02
162GO:0016567: protein ubiquitination2.05E-02
163GO:0006636: unsaturated fatty acid biosynthetic process2.06E-02
164GO:0009833: plant-type primary cell wall biogenesis2.06E-02
165GO:0010187: negative regulation of seed germination2.22E-02
166GO:2000377: regulation of reactive oxygen species metabolic process2.22E-02
167GO:0009863: salicylic acid mediated signaling pathway2.22E-02
168GO:0009695: jasmonic acid biosynthetic process2.38E-02
169GO:0009651: response to salt stress2.55E-02
170GO:0009269: response to desiccation2.55E-02
171GO:0051321: meiotic cell cycle2.55E-02
172GO:0080092: regulation of pollen tube growth2.72E-02
173GO:0001944: vasculature development2.89E-02
174GO:0071215: cellular response to abscisic acid stimulus2.89E-02
175GO:0010584: pollen exine formation3.07E-02
176GO:0048443: stamen development3.07E-02
177GO:0080167: response to karrikin3.10E-02
178GO:0008284: positive regulation of cell proliferation3.25E-02
179GO:0009624: response to nematode3.34E-02
180GO:0000271: polysaccharide biosynthetic process3.44E-02
181GO:0000226: microtubule cytoskeleton organization3.44E-02
182GO:0018105: peptidyl-serine phosphorylation3.44E-02
183GO:0010268: brassinosteroid homeostasis3.63E-02
184GO:0009960: endosperm development3.63E-02
185GO:0009958: positive gravitropism3.63E-02
186GO:0071472: cellular response to salt stress3.63E-02
187GO:0010154: fruit development3.63E-02
188GO:0006979: response to oxidative stress3.67E-02
189GO:0006814: sodium ion transport3.82E-02
190GO:0000398: mRNA splicing, via spliceosome3.85E-02
191GO:0045892: negative regulation of transcription, DNA-templated3.94E-02
192GO:0008654: phospholipid biosynthetic process4.01E-02
193GO:0010183: pollen tube guidance4.01E-02
194GO:0010193: response to ozone4.21E-02
195GO:0006891: intra-Golgi vesicle-mediated transport4.21E-02
196GO:0016132: brassinosteroid biosynthetic process4.21E-02
197GO:0080156: mitochondrial mRNA modification4.21E-02
198GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.21E-02
199GO:0016125: sterol metabolic process4.83E-02
200GO:0009639: response to red or far red light4.83E-02
RankGO TermAdjusted P value
1GO:0042171: lysophosphatidic acid acyltransferase activity0.00E+00
2GO:0004698: calcium-dependent protein kinase C activity0.00E+00
3GO:0017048: Rho GTPase binding0.00E+00
4GO:0008419: RNA lariat debranching enzyme activity0.00E+00
5GO:0009922: fatty acid elongase activity2.24E-06
6GO:0016629: 12-oxophytodienoate reductase activity7.60E-06
7GO:0003883: CTP synthase activity5.73E-05
8GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity5.73E-05
9GO:0003700: transcription factor activity, sequence-specific DNA binding7.41E-05
10GO:0015297: antiporter activity1.03E-04
11GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.85E-04
12GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.85E-04
13GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.85E-04
14GO:0004348: glucosylceramidase activity4.13E-04
15GO:0071992: phytochelatin transmembrane transporter activity4.13E-04
16GO:0090440: abscisic acid transporter activity4.13E-04
17GO:0090422: thiamine pyrophosphate transporter activity4.13E-04
18GO:0004105: choline-phosphate cytidylyltransferase activity4.13E-04
19GO:0046870: cadmium ion binding4.13E-04
20GO:0052631: sphingolipid delta-8 desaturase activity4.13E-04
21GO:0015446: ATPase-coupled arsenite transmembrane transporter activity4.13E-04
22GO:0052638: indole-3-butyrate beta-glucosyltransferase activity4.13E-04
23GO:0043565: sequence-specific DNA binding4.78E-04
24GO:0044212: transcription regulatory region DNA binding4.95E-04
25GO:0010181: FMN binding5.95E-04
26GO:0015117: thiosulfate transmembrane transporter activity8.93E-04
27GO:1901677: phosphate transmembrane transporter activity8.93E-04
28GO:0017022: myosin binding8.93E-04
29GO:0004103: choline kinase activity8.93E-04
30GO:0001047: core promoter binding8.93E-04
31GO:0042389: omega-3 fatty acid desaturase activity8.93E-04
32GO:0017040: ceramidase activity8.93E-04
33GO:0003839: gamma-glutamylcyclotransferase activity8.93E-04
34GO:0003958: NADPH-hemoprotein reductase activity8.93E-04
35GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity8.93E-04
36GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.75E-04
37GO:0003840: gamma-glutamyltransferase activity1.45E-03
38GO:0036374: glutathione hydrolase activity1.45E-03
39GO:0004383: guanylate cyclase activity1.45E-03
40GO:0005457: GDP-fucose transmembrane transporter activity1.45E-03
41GO:0047325: inositol tetrakisphosphate 1-kinase activity1.45E-03
42GO:0005310: dicarboxylic acid transmembrane transporter activity1.45E-03
43GO:0047274: galactinol-sucrose galactosyltransferase activity1.45E-03
44GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.45E-03
45GO:0015141: succinate transmembrane transporter activity1.45E-03
46GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity1.45E-03
47GO:0008083: growth factor activity1.64E-03
48GO:0005460: UDP-glucose transmembrane transporter activity2.10E-03
49GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity2.10E-03
50GO:0001653: peptide receptor activity2.10E-03
51GO:0015131: oxaloacetate transmembrane transporter activity2.10E-03
52GO:0035250: UDP-galactosyltransferase activity2.10E-03
53GO:0005432: calcium:sodium antiporter activity2.10E-03
54GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.70E-03
55GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity2.82E-03
56GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.01E-03
57GO:0004722: protein serine/threonine phosphatase activity3.27E-03
58GO:0016301: kinase activity3.49E-03
59GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.61E-03
60GO:0010294: abscisic acid glucosyltransferase activity3.61E-03
61GO:0005459: UDP-galactose transmembrane transporter activity3.61E-03
62GO:0019139: cytokinin dehydrogenase activity3.61E-03
63GO:0080122: AMP transmembrane transporter activity3.61E-03
64GO:0004623: phospholipase A2 activity3.61E-03
65GO:0045330: aspartyl esterase activity4.91E-03
66GO:0005347: ATP transmembrane transporter activity5.38E-03
67GO:0015217: ADP transmembrane transporter activity5.38E-03
68GO:0080043: quercetin 3-O-glucosyltransferase activity6.03E-03
69GO:0080044: quercetin 7-O-glucosyltransferase activity6.03E-03
70GO:0030599: pectinesterase activity6.27E-03
71GO:0016621: cinnamoyl-CoA reductase activity6.36E-03
72GO:0015140: malate transmembrane transporter activity6.36E-03
73GO:0015491: cation:cation antiporter activity7.40E-03
74GO:0016209: antioxidant activity7.40E-03
75GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.49E-03
76GO:0005267: potassium channel activity8.49E-03
77GO:0008308: voltage-gated anion channel activity8.49E-03
78GO:0016758: transferase activity, transferring hexosyl groups8.72E-03
79GO:0004842: ubiquitin-protein transferase activity9.16E-03
80GO:0000989: transcription factor activity, transcription factor binding9.65E-03
81GO:0005096: GTPase activator activity1.11E-02
82GO:0015238: drug transmembrane transporter activity1.11E-02
83GO:0005545: 1-phosphatidylinositol binding1.21E-02
84GO:0004864: protein phosphatase inhibitor activity1.21E-02
85GO:0003677: DNA binding1.27E-02
86GO:0004674: protein serine/threonine kinase activity1.28E-02
87GO:0015116: sulfate transmembrane transporter activity1.48E-02
88GO:0008194: UDP-glycosyltransferase activity1.57E-02
89GO:0005262: calcium channel activity1.62E-02
90GO:0015114: phosphate ion transmembrane transporter activity1.62E-02
91GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.76E-02
92GO:0003774: motor activity1.76E-02
93GO:0017025: TBP-class protein binding1.91E-02
94GO:0008146: sulfotransferase activity1.91E-02
95GO:0004857: enzyme inhibitor activity2.22E-02
96GO:0035251: UDP-glucosyltransferase activity2.55E-02
97GO:0004707: MAP kinase activity2.55E-02
98GO:0030570: pectate lyase activity2.89E-02
99GO:0016746: transferase activity, transferring acyl groups3.44E-02
100GO:0030276: clathrin binding3.63E-02
101GO:0004518: nuclease activity4.41E-02
RankGO TermAdjusted P value
1GO:0070382: exocytic vesicle4.13E-04
2GO:0042170: plastid membrane8.93E-04
3GO:0030133: transport vesicle8.93E-04
4GO:0031357: integral component of chloroplast inner membrane8.93E-04
5GO:0046658: anchored component of plasma membrane1.05E-03
6GO:0045177: apical part of cell2.10E-03
7GO:0000793: condensed chromosome4.47E-03
8GO:0000794: condensed nuclear chromosome6.36E-03
9GO:0031225: anchored component of membrane7.96E-03
10GO:0005622: intracellular1.02E-02
11GO:0016604: nuclear body1.09E-02
12GO:0005743: mitochondrial inner membrane1.31E-02
13GO:0005938: cell cortex1.62E-02
14GO:0005795: Golgi stack1.91E-02
15GO:0005905: clathrin-coated pit2.55E-02
16GO:0016607: nuclear speck2.86E-02
17GO:0030136: clathrin-coated vesicle3.25E-02
18GO:0009706: chloroplast inner membrane3.34E-02
19GO:0005770: late endosome3.63E-02
20GO:0005886: plasma membrane3.81E-02
<
Gene type



Gene DE type