Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G34240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010046: response to mycotoxin0.00E+00
2GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
3GO:0009560: embryo sac egg cell differentiation0.00E+00
4GO:0042353: fucose biosynthetic process0.00E+00
5GO:0019481: L-alanine catabolic process, by transamination0.00E+00
6GO:2000070: regulation of response to water deprivation1.51E-05
7GO:0009966: regulation of signal transduction4.31E-05
8GO:0009609: response to symbiotic bacterium4.31E-05
9GO:0009737: response to abscisic acid9.33E-05
10GO:0042754: negative regulation of circadian rhythm1.07E-04
11GO:0010372: positive regulation of gibberellin biosynthetic process1.07E-04
12GO:2000030: regulation of response to red or far red light1.07E-04
13GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'1.84E-04
14GO:0046168: glycerol-3-phosphate catabolic process1.84E-04
15GO:0080168: abscisic acid transport1.84E-04
16GO:0009409: response to cold2.42E-04
17GO:0009413: response to flooding2.70E-04
18GO:0006072: glycerol-3-phosphate metabolic process2.70E-04
19GO:0009399: nitrogen fixation2.70E-04
20GO:0009611: response to wounding3.02E-04
21GO:0046686: response to cadmium ion3.16E-04
22GO:0009694: jasmonic acid metabolic process3.64E-04
23GO:0006536: glutamate metabolic process3.64E-04
24GO:0001709: cell fate determination3.64E-04
25GO:0006457: protein folding4.38E-04
26GO:0006970: response to osmotic stress5.00E-04
27GO:0010256: endomembrane system organization5.67E-04
28GO:0006796: phosphate-containing compound metabolic process5.67E-04
29GO:0009861: jasmonic acid and ethylene-dependent systemic resistance6.76E-04
30GO:0010555: response to mannitol6.76E-04
31GO:1902074: response to salt7.90E-04
32GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.90E-04
33GO:0006401: RNA catabolic process7.90E-04
34GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway7.90E-04
35GO:0006402: mRNA catabolic process9.08E-04
36GO:0010208: pollen wall assembly1.03E-03
37GO:0009699: phenylpropanoid biosynthetic process1.03E-03
38GO:0009056: catabolic process1.16E-03
39GO:0010345: suberin biosynthetic process1.16E-03
40GO:0046685: response to arsenic-containing substance1.16E-03
41GO:2000280: regulation of root development1.29E-03
42GO:0009873: ethylene-activated signaling pathway1.32E-03
43GO:0048829: root cap development1.43E-03
44GO:0010015: root morphogenesis1.57E-03
45GO:0071365: cellular response to auxin stimulus1.72E-03
46GO:0006820: anion transport1.72E-03
47GO:0034605: cellular response to heat2.03E-03
48GO:0009969: xyloglucan biosynthetic process2.19E-03
49GO:0006633: fatty acid biosynthetic process2.30E-03
50GO:2000377: regulation of reactive oxygen species metabolic process2.52E-03
51GO:0009863: salicylic acid mediated signaling pathway2.52E-03
52GO:0007623: circadian rhythm2.52E-03
53GO:0061077: chaperone-mediated protein folding2.88E-03
54GO:0009269: response to desiccation2.88E-03
55GO:0030433: ubiquitin-dependent ERAD pathway3.06E-03
56GO:0031348: negative regulation of defense response3.06E-03
57GO:0009686: gibberellin biosynthetic process3.24E-03
58GO:0009306: protein secretion3.43E-03
59GO:0009749: response to glucose4.43E-03
60GO:0000302: response to reactive oxygen species4.64E-03
61GO:0010193: response to ozone4.64E-03
62GO:0031047: gene silencing by RNA4.86E-03
63GO:0007267: cell-cell signaling5.52E-03
64GO:0010286: heat acclimation5.52E-03
65GO:0001666: response to hypoxia5.98E-03
66GO:0009615: response to virus5.98E-03
67GO:0009788: negative regulation of abscisic acid-activated signaling pathway6.21E-03
68GO:0009816: defense response to bacterium, incompatible interaction6.21E-03
69GO:0009627: systemic acquired resistance6.45E-03
70GO:0009408: response to heat7.08E-03
71GO:0010311: lateral root formation7.43E-03
72GO:0010119: regulation of stomatal movement7.95E-03
73GO:0005975: carbohydrate metabolic process8.14E-03
74GO:0009640: photomorphogenesis1.01E-02
75GO:0006855: drug transmembrane transport1.13E-02
76GO:0042538: hyperosmotic salinity response1.19E-02
77GO:0009738: abscisic acid-activated signaling pathway1.22E-02
78GO:0009809: lignin biosynthetic process1.25E-02
79GO:0006364: rRNA processing1.25E-02
80GO:0009585: red, far-red light phototransduction1.25E-02
81GO:0010224: response to UV-B1.28E-02
82GO:0009553: embryo sac development1.57E-02
83GO:0009624: response to nematode1.60E-02
84GO:0009742: brassinosteroid mediated signaling pathway1.67E-02
85GO:0000398: mRNA splicing, via spliceosome1.77E-02
86GO:0009845: seed germination1.99E-02
87GO:0009651: response to salt stress2.22E-02
88GO:0010150: leaf senescence2.36E-02
89GO:0007166: cell surface receptor signaling pathway2.60E-02
90GO:0009617: response to bacterium2.68E-02
91GO:0009826: unidimensional cell growth3.14E-02
92GO:0009860: pollen tube growth3.40E-02
93GO:0048366: leaf development3.62E-02
94GO:0080167: response to karrikin3.76E-02
95GO:0010200: response to chitin3.85E-02
96GO:0016192: vesicle-mediated transport3.89E-02
97GO:0006952: defense response4.15E-02
98GO:0006886: intracellular protein transport4.37E-02
99GO:0006629: lipid metabolic process4.95E-02
RankGO TermAdjusted P value
1GO:0030621: U4 snRNA binding0.00E+00
2GO:0080123: jasmonate-amino synthetase activity0.00E+00
3GO:0070566: adenylyltransferase activity0.00E+00
4GO:0009922: fatty acid elongase activity3.64E-06
5GO:0090440: abscisic acid transporter activity4.31E-05
6GO:0102337: 3-oxo-cerotoyl-CoA synthase activity8.92E-05
7GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity8.92E-05
8GO:0102336: 3-oxo-arachidoyl-CoA synthase activity8.92E-05
9GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.84E-04
10GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity2.70E-04
11GO:0004351: glutamate decarboxylase activity2.70E-04
12GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity2.70E-04
13GO:0008526: phosphatidylinositol transporter activity3.64E-04
14GO:0043015: gamma-tubulin binding3.64E-04
15GO:0002020: protease binding4.63E-04
16GO:0004356: glutamate-ammonia ligase activity4.63E-04
17GO:0017070: U6 snRNA binding4.63E-04
18GO:0008381: mechanically-gated ion channel activity4.63E-04
19GO:0019899: enzyme binding7.90E-04
20GO:0004143: diacylglycerol kinase activity7.90E-04
21GO:0004427: inorganic diphosphatase activity7.90E-04
22GO:0016621: cinnamoyl-CoA reductase activity7.90E-04
23GO:0003951: NAD+ kinase activity1.03E-03
24GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.16E-03
25GO:0019888: protein phosphatase regulator activity1.87E-03
26GO:0000175: 3'-5'-exoribonuclease activity1.87E-03
27GO:0051087: chaperone binding2.70E-03
28GO:0004540: ribonuclease activity2.88E-03
29GO:0008536: Ran GTPase binding4.02E-03
30GO:0050662: coenzyme binding4.23E-03
31GO:0004518: nuclease activity4.86E-03
32GO:0015238: drug transmembrane transporter activity7.43E-03
33GO:0043621: protein self-association1.07E-02
34GO:0051287: NAD binding1.16E-02
35GO:0031625: ubiquitin protein ligase binding1.34E-02
36GO:0051082: unfolded protein binding1.60E-02
37GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.66E-02
38GO:0030170: pyridoxal phosphate binding2.02E-02
39GO:0008565: protein transporter activity2.13E-02
40GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.25E-02
41GO:0015297: antiporter activity2.29E-02
42GO:0008017: microtubule binding2.44E-02
43GO:0005524: ATP binding2.57E-02
44GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.80E-02
45GO:0003824: catalytic activity2.81E-02
46GO:0003676: nucleic acid binding2.87E-02
47GO:0000287: magnesium ion binding3.18E-02
48GO:0003729: mRNA binding3.80E-02
49GO:0052689: carboxylic ester hydrolase activity4.03E-02
RankGO TermAdjusted P value
1GO:0016442: RISC complex4.31E-05
2GO:0009331: glycerol-3-phosphate dehydrogenase complex2.70E-04
3GO:0000932: P-body3.84E-04
4GO:0000178: exosome (RNase complex)4.63E-04
5GO:0005829: cytosol5.73E-04
6GO:0030173: integral component of Golgi membrane6.76E-04
7GO:0016363: nuclear matrix6.76E-04
8GO:0046540: U4/U6 x U5 tri-snRNP complex1.03E-03
9GO:0010494: cytoplasmic stress granule1.16E-03
10GO:0048471: perinuclear region of cytoplasm1.57E-03
11GO:0005770: late endosome4.02E-03
12GO:0005886: plasma membrane5.21E-03
13GO:0032580: Golgi cisterna membrane5.30E-03
14GO:0005643: nuclear pore7.19E-03
15GO:0031902: late endosome membrane9.56E-03
16GO:0005737: cytoplasm1.23E-02
17GO:0005635: nuclear envelope1.31E-02
18GO:0009506: plasmodesma1.35E-02
19GO:0005681: spliceosomal complex1.40E-02
20GO:0016607: nuclear speck1.44E-02
21GO:0010008: endosome membrane1.44E-02
22GO:0031225: anchored component of membrane1.97E-02
23GO:0005802: trans-Golgi network2.02E-02
24GO:0005794: Golgi apparatus2.26E-02
25GO:0005768: endosome2.30E-02
26GO:0005774: vacuolar membrane2.31E-02
27GO:0046658: anchored component of plasma membrane2.88E-02
28GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.44E-02
29GO:0005743: mitochondrial inner membrane4.71E-02
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Gene type



Gene DE type