Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G33905

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019593: mannitol biosynthetic process0.00E+00
2GO:1904526: regulation of microtubule binding0.00E+00
3GO:0010046: response to mycotoxin0.00E+00
4GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
5GO:0009737: response to abscisic acid5.78E-07
6GO:0006970: response to osmotic stress6.27E-06
7GO:0009611: response to wounding1.54E-05
8GO:0009415: response to water9.09E-05
9GO:2000070: regulation of response to water deprivation9.09E-05
10GO:0009414: response to water deprivation1.04E-04
11GO:0010286: heat acclimation1.18E-04
12GO:0034472: snRNA 3'-end processing1.35E-04
13GO:0009609: response to symbiotic bacterium1.35E-04
14GO:0048700: acquisition of desiccation tolerance in seed1.35E-04
15GO:0051180: vitamin transport1.35E-04
16GO:0030974: thiamine pyrophosphate transport1.35E-04
17GO:1902039: negative regulation of seed dormancy process1.35E-04
18GO:0010029: regulation of seed germination1.51E-04
19GO:2000280: regulation of root development1.69E-04
20GO:0010015: root morphogenesis2.34E-04
21GO:0031407: oxylipin metabolic process3.11E-04
22GO:0010289: homogalacturonan biosynthetic process3.11E-04
23GO:2000030: regulation of response to red or far red light3.11E-04
24GO:0044419: interspecies interaction between organisms3.11E-04
25GO:0015893: drug transport3.11E-04
26GO:0048838: release of seed from dormancy3.11E-04
27GO:1901679: nucleotide transmembrane transport3.11E-04
28GO:0006470: protein dephosphorylation3.17E-04
29GO:0009873: ethylene-activated signaling pathway3.65E-04
30GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid5.13E-04
31GO:0010325: raffinose family oligosaccharide biosynthetic process5.13E-04
32GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'5.13E-04
33GO:0046168: glycerol-3-phosphate catabolic process5.13E-04
34GO:0080121: AMP transport5.13E-04
35GO:0080168: abscisic acid transport5.13E-04
36GO:0010288: response to lead ion5.13E-04
37GO:0009269: response to desiccation5.84E-04
38GO:0010031: circumnutation7.34E-04
39GO:0009413: response to flooding7.34E-04
40GO:0006072: glycerol-3-phosphate metabolic process7.34E-04
41GO:0009939: positive regulation of gibberellic acid mediated signaling pathway9.73E-04
42GO:0006552: leucine catabolic process9.73E-04
43GO:0015867: ATP transport9.73E-04
44GO:0009694: jasmonic acid metabolic process9.73E-04
45GO:0009247: glycolipid biosynthetic process1.23E-03
46GO:0045487: gibberellin catabolic process1.23E-03
47GO:0006751: glutathione catabolic process1.51E-03
48GO:0015866: ADP transport1.51E-03
49GO:0045962: positive regulation of development, heterochronic1.51E-03
50GO:0035435: phosphate ion transmembrane transport1.51E-03
51GO:0006796: phosphate-containing compound metabolic process1.51E-03
52GO:1900425: negative regulation of defense response to bacterium1.51E-03
53GO:0006574: valine catabolic process1.51E-03
54GO:0006633: fatty acid biosynthetic process1.56E-03
55GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.74E-03
56GO:0009861: jasmonic acid and ethylene-dependent systemic resistance1.81E-03
57GO:0010555: response to mannitol1.81E-03
58GO:0045926: negative regulation of growth1.81E-03
59GO:0009082: branched-chain amino acid biosynthetic process1.81E-03
60GO:0098655: cation transmembrane transport1.81E-03
61GO:0009651: response to salt stress1.83E-03
62GO:1902074: response to salt2.12E-03
63GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.12E-03
64GO:0006401: RNA catabolic process2.12E-03
65GO:1900057: positive regulation of leaf senescence2.12E-03
66GO:0007155: cell adhesion2.46E-03
67GO:0009631: cold acclimation2.46E-03
68GO:0019375: galactolipid biosynthetic process2.46E-03
69GO:0048193: Golgi vesicle transport2.81E-03
70GO:0009738: abscisic acid-activated signaling pathway2.87E-03
71GO:0006839: mitochondrial transport3.07E-03
72GO:0010345: suberin biosynthetic process3.17E-03
73GO:0098656: anion transmembrane transport3.17E-03
74GO:0090305: nucleic acid phosphodiester bond hydrolysis3.17E-03
75GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay3.17E-03
76GO:0010112: regulation of systemic acquired resistance3.17E-03
77GO:0051707: response to other organism3.47E-03
78GO:0009409: response to cold3.77E-03
79GO:0055062: phosphate ion homeostasis3.95E-03
80GO:0010200: response to chitin4.19E-03
81GO:0000038: very long-chain fatty acid metabolic process4.36E-03
82GO:0006364: rRNA processing4.66E-03
83GO:0071365: cellular response to auxin stimulus4.79E-03
84GO:0010224: response to UV-B4.82E-03
85GO:0005986: sucrose biosynthetic process5.22E-03
86GO:0048367: shoot system development5.68E-03
87GO:0010030: positive regulation of seed germination6.14E-03
88GO:0070588: calcium ion transmembrane transport6.14E-03
89GO:2000377: regulation of reactive oxygen species metabolic process7.11E-03
90GO:0009695: jasmonic acid biosynthetic process7.62E-03
91GO:0031408: oxylipin biosynthetic process8.14E-03
92GO:0031348: negative regulation of defense response8.67E-03
93GO:0009686: gibberellin biosynthetic process9.21E-03
94GO:0009790: embryo development9.68E-03
95GO:0042335: cuticle development1.09E-02
96GO:0000271: polysaccharide biosynthetic process1.09E-02
97GO:0010501: RNA secondary structure unwinding1.09E-02
98GO:0048868: pollen tube development1.15E-02
99GO:0045489: pectin biosynthetic process1.15E-02
100GO:0007623: circadian rhythm1.15E-02
101GO:0010150: leaf senescence1.15E-02
102GO:0006814: sodium ion transport1.21E-02
103GO:0009749: response to glucose1.27E-02
104GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.34E-02
105GO:0010193: response to ozone1.34E-02
106GO:0000302: response to reactive oxygen species1.34E-02
107GO:0050832: defense response to fungus1.48E-02
108GO:0009639: response to red or far red light1.53E-02
109GO:0071805: potassium ion transmembrane transport1.60E-02
110GO:0006904: vesicle docking involved in exocytosis1.60E-02
111GO:0045893: positive regulation of transcription, DNA-templated1.63E-02
112GO:0005975: carbohydrate metabolic process1.65E-02
113GO:0051607: defense response to virus1.66E-02
114GO:0046686: response to cadmium ion1.72E-02
115GO:0010027: thylakoid membrane organization1.73E-02
116GO:0009627: systemic acquired resistance1.88E-02
117GO:0080167: response to karrikin2.21E-02
118GO:0010119: regulation of stomatal movement2.32E-02
119GO:0016051: carbohydrate biosynthetic process2.48E-02
120GO:0042542: response to hydrogen peroxide2.88E-02
121GO:0009640: photomorphogenesis2.97E-02
122GO:0009644: response to high light intensity3.14E-02
123GO:0016042: lipid catabolic process3.16E-02
124GO:0009751: response to salicylic acid3.21E-02
125GO:0009965: leaf morphogenesis3.23E-02
126GO:0006855: drug transmembrane transport3.31E-02
127GO:0048364: root development3.40E-02
128GO:0009753: response to jasmonic acid3.49E-02
129GO:0042538: hyperosmotic salinity response3.49E-02
130GO:0006812: cation transport3.49E-02
131GO:0008152: metabolic process3.59E-02
132GO:0009809: lignin biosynthetic process3.67E-02
133GO:0009585: red, far-red light phototransduction3.67E-02
134GO:0006813: potassium ion transport3.67E-02
135GO:0048316: seed development4.23E-02
136GO:0009620: response to fungus4.42E-02
137GO:0006351: transcription, DNA-templated4.70E-02
138GO:0006396: RNA processing4.81E-02
RankGO TermAdjusted P value
1GO:0080123: jasmonate-amino synthetase activity0.00E+00
2GO:0070566: adenylyltransferase activity0.00E+00
3GO:0008419: RNA lariat debranching enzyme activity0.00E+00
4GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.60E-05
5GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.60E-05
6GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.60E-05
7GO:0009922: fatty acid elongase activity2.48E-05
8GO:0090422: thiamine pyrophosphate transporter activity1.35E-04
9GO:0090440: abscisic acid transporter activity1.35E-04
10GO:0004722: protein serine/threonine phosphatase activity1.78E-04
11GO:0004103: choline kinase activity3.11E-04
12GO:0001047: core promoter binding3.11E-04
13GO:0003839: gamma-glutamylcyclotransferase activity3.11E-04
14GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity3.11E-04
15GO:0016629: 12-oxophytodienoate reductase activity3.11E-04
16GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity5.13E-04
17GO:0047274: galactinol-sucrose galactosyltransferase activity5.13E-04
18GO:0046423: allene-oxide cyclase activity5.13E-04
19GO:0052654: L-leucine transaminase activity7.34E-04
20GO:0052655: L-valine transaminase activity7.34E-04
21GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity7.34E-04
22GO:0005432: calcium:sodium antiporter activity7.34E-04
23GO:0035250: UDP-galactosyltransferase activity7.34E-04
24GO:0010178: IAA-amino acid conjugate hydrolase activity7.34E-04
25GO:0052656: L-isoleucine transaminase activity7.34E-04
26GO:0004084: branched-chain-amino-acid transaminase activity9.73E-04
27GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.23E-03
28GO:0080122: AMP transmembrane transporter activity1.23E-03
29GO:0015297: antiporter activity1.66E-03
30GO:0015217: ADP transmembrane transporter activity1.81E-03
31GO:0005347: ATP transmembrane transporter activity1.81E-03
32GO:0004004: ATP-dependent RNA helicase activity1.93E-03
33GO:0004427: inorganic diphosphatase activity2.12E-03
34GO:0016621: cinnamoyl-CoA reductase activity2.12E-03
35GO:0019899: enzyme binding2.12E-03
36GO:0004564: beta-fructofuranosidase activity2.46E-03
37GO:0015491: cation:cation antiporter activity2.46E-03
38GO:0005267: potassium channel activity2.81E-03
39GO:0004575: sucrose alpha-glucosidase activity3.55E-03
40GO:0004864: protein phosphatase inhibitor activity3.95E-03
41GO:0005262: calcium channel activity5.22E-03
42GO:0015114: phosphate ion transmembrane transporter activity5.22E-03
43GO:0000175: 3'-5'-exoribonuclease activity5.22E-03
44GO:0051087: chaperone binding7.62E-03
45GO:0004540: ribonuclease activity8.14E-03
46GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity8.67E-03
47GO:0044212: transcription regulatory region DNA binding8.80E-03
48GO:0010181: FMN binding1.21E-02
49GO:0004518: nuclease activity1.40E-02
50GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.60E-02
51GO:0008237: metallopeptidase activity1.60E-02
52GO:0016788: hydrolase activity, acting on ester bonds1.81E-02
53GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.94E-02
54GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.02E-02
55GO:0015238: drug transmembrane transporter activity2.17E-02
56GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.32E-02
57GO:0052689: carboxylic ester hydrolase activity2.44E-02
58GO:0003993: acid phosphatase activity2.56E-02
59GO:0046872: metal ion binding3.19E-02
60GO:0051287: NAD binding3.40E-02
61GO:0043565: sequence-specific DNA binding3.68E-02
62GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.23E-02
63GO:0003700: transcription factor activity, sequence-specific DNA binding4.41E-02
64GO:0080043: quercetin 3-O-glucosyltransferase activity4.42E-02
65GO:0080044: quercetin 7-O-glucosyltransferase activity4.42E-02
66GO:0016746: transferase activity, transferring acyl groups4.81E-02
RankGO TermAdjusted P value
1GO:0032039: integrator complex0.00E+00
2GO:0009331: glycerol-3-phosphate dehydrogenase complex7.34E-04
3GO:0005743: mitochondrial inner membrane1.13E-03
4GO:0000178: exosome (RNase complex)1.23E-03
5GO:0031225: anchored component of membrane1.40E-03
6GO:0005770: late endosome1.15E-02
7GO:0000145: exocyst1.40E-02
8GO:0046658: anchored component of plasma membrane1.52E-02
9GO:0005778: peroxisomal membrane1.60E-02
10GO:0000932: P-body1.73E-02
11GO:0005788: endoplasmic reticulum lumen1.80E-02
12GO:0005874: microtubule2.13E-02
13GO:0005737: cytoplasm2.41E-02
14GO:0031902: late endosome membrane2.80E-02
15GO:0009706: chloroplast inner membrane4.71E-02
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Gene type



Gene DE type