co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G33780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903647: negative regulation of chlorophyll catabolic process	0.00E+00
2	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
3	GO:0006721: terpenoid metabolic process	0.00E+00
4	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
5	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
6	GO:0001881: receptor recycling	0.00E+00
7	GO:0048870: cell motility	0.00E+00
8	GO:0018293: protein-FAD linkage	0.00E+00
9	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
10	GO:0006593: ornithine catabolic process	0.00E+00
11	GO:0070207: protein homotrimerization	0.00E+00
12	GO:0071284: cellular response to lead ion	0.00E+00
13	GO:0023052: signaling	0.00E+00
14	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	1.47E-06
15	GO:0006099: tricarboxylic acid cycle	3.85E-06
16	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	8.18E-05
17	GO:0006555: methionine metabolic process	8.18E-05
18	GO:0019509: L-methionine salvage from methylthioadenosine	1.13E-04
19	GO:0055114: oxidation-reduction process	1.61E-04
20	GO:0019544: arginine catabolic process to glutamate	2.20E-04
21	GO:0015798: myo-inositol transport	2.20E-04
22	GO:0006148: inosine catabolic process	2.20E-04
23	GO:0016487: farnesol metabolic process	2.20E-04
24	GO:0009240: isopentenyl diphosphate biosynthetic process	2.20E-04
25	GO:0009852: auxin catabolic process	2.20E-04
26	GO:0031468: nuclear envelope reassembly	2.20E-04
27	GO:0003400: regulation of COPII vesicle coating	2.20E-04
28	GO:0006511: ubiquitin-dependent protein catabolic process	2.33E-04
29	GO:0007163: establishment or maintenance of cell polarity	4.90E-04
30	GO:0080026: response to indolebutyric acid	4.90E-04
31	GO:0043132: NAD transport	4.90E-04
32	GO:0050992: dimethylallyl diphosphate biosynthetic process	4.90E-04
33	GO:0046939: nucleotide phosphorylation	4.90E-04
34	GO:0009915: phloem sucrose loading	4.90E-04
35	GO:0006212: uracil catabolic process	4.90E-04
36	GO:0030010: establishment of cell polarity	4.90E-04
37	GO:0019483: beta-alanine biosynthetic process	4.90E-04
38	GO:0010043: response to zinc ion	6.00E-04
39	GO:0006807: nitrogen compound metabolic process	6.01E-04
40	GO:0009853: photorespiration	6.73E-04
41	GO:0044375: regulation of peroxisome size	7.98E-04
42	GO:0045793: positive regulation of cell size	7.98E-04
43	GO:0006760: folic acid-containing compound metabolic process	7.98E-04
44	GO:0044746: amino acid transmembrane export	7.98E-04
45	GO:0008333: endosome to lysosome transport	7.98E-04
46	GO:0051646: mitochondrion localization	7.98E-04
47	GO:2000377: regulation of reactive oxygen species metabolic process	9.27E-04
48	GO:0006487: protein N-linked glycosylation	9.27E-04
49	GO:0009651: response to salt stress	1.01E-03
50	GO:0061077: chaperone-mediated protein folding	1.12E-03
51	GO:1901332: negative regulation of lateral root development	1.14E-03
52	GO:0080024: indolebutyric acid metabolic process	1.14E-03
53	GO:0032877: positive regulation of DNA endoreduplication	1.14E-03
54	GO:0006107: oxaloacetate metabolic process	1.14E-03
55	GO:0015858: nucleoside transport	1.14E-03
56	GO:0006012: galactose metabolic process	1.33E-03
57	GO:0051603: proteolysis involved in cellular protein catabolic process	1.40E-03
58	GO:0032366: intracellular sterol transport	1.51E-03
59	GO:0006646: phosphatidylethanolamine biosynthetic process	1.51E-03
60	GO:0015976: carbon utilization	1.51E-03
61	GO:0051781: positive regulation of cell division	1.51E-03
62	GO:0015991: ATP hydrolysis coupled proton transport	1.68E-03
63	GO:0030041: actin filament polymerization	1.93E-03
64	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.93E-03
65	GO:0009697: salicylic acid biosynthetic process	1.93E-03
66	GO:0006561: proline biosynthetic process	2.38E-03
67	GO:0043248: proteasome assembly	2.38E-03
68	GO:0010189: vitamin E biosynthetic process	2.86E-03
69	GO:1901001: negative regulation of response to salt stress	2.86E-03
70	GO:0022904: respiratory electron transport chain	3.36E-03
71	GO:0050790: regulation of catalytic activity	3.36E-03
72	GO:0009816: defense response to bacterium, incompatible interaction	3.40E-03
73	GO:0006506: GPI anchor biosynthetic process	3.90E-03
74	GO:0000028: ribosomal small subunit assembly	3.90E-03
75	GO:0045010: actin nucleation	3.90E-03
76	GO:0043562: cellular response to nitrogen levels	4.47E-03
77	GO:0022900: electron transport chain	4.47E-03
78	GO:0015996: chlorophyll catabolic process	4.47E-03
79	GO:0009880: embryonic pattern specification	4.47E-03
80	GO:0006810: transport	4.53E-03
81	GO:0006754: ATP biosynthetic process	5.06E-03
82	GO:0009060: aerobic respiration	5.06E-03
83	GO:0000902: cell morphogenesis	5.06E-03
84	GO:0042761: very long-chain fatty acid biosynthetic process	5.68E-03
85	GO:0006631: fatty acid metabolic process	6.30E-03
86	GO:0000103: sulfate assimilation	6.32E-03
87	GO:0043069: negative regulation of programmed cell death	6.32E-03
88	GO:0045036: protein targeting to chloroplast	6.32E-03
89	GO:0030148: sphingolipid biosynthetic process	6.98E-03
90	GO:0010015: root morphogenesis	6.98E-03
91	GO:0009735: response to cytokinin	7.48E-03
92	GO:0009636: response to toxic substance	7.68E-03
93	GO:0009691: cytokinin biosynthetic process	8.39E-03
94	GO:0006108: malate metabolic process	8.39E-03
95	GO:0006094: gluconeogenesis	8.39E-03
96	GO:0006829: zinc II ion transport	8.39E-03
97	GO:0042538: hyperosmotic salinity response	8.58E-03
98	GO:0009266: response to temperature stimulus	9.13E-03
99	GO:0002237: response to molecule of bacterial origin	9.13E-03
100	GO:0007034: vacuolar transport	9.13E-03
101	GO:0007030: Golgi organization	9.90E-03
102	GO:0009901: anther dehiscence	9.90E-03
103	GO:0006636: unsaturated fatty acid biosynthetic process	1.07E-02
104	GO:0006406: mRNA export from nucleus	1.15E-02
105	GO:0045454: cell redox homeostasis	1.21E-02
106	GO:0051302: regulation of cell division	1.23E-02
107	GO:0008299: isoprenoid biosynthetic process	1.23E-02
108	GO:0015992: proton transport	1.32E-02
109	GO:0048511: rhythmic process	1.32E-02
110	GO:0010431: seed maturation	1.32E-02
111	GO:0019748: secondary metabolic process	1.40E-02
112	GO:0016226: iron-sulfur cluster assembly	1.40E-02
113	GO:0035428: hexose transmembrane transport	1.40E-02
114	GO:0016042: lipid catabolic process	1.52E-02
115	GO:0009306: protein secretion	1.58E-02
116	GO:0046686: response to cadmium ion	1.59E-02
117	GO:0042147: retrograde transport, endosome to Golgi	1.68E-02
118	GO:0080022: primary root development	1.77E-02
119	GO:0034220: ion transmembrane transport	1.77E-02
120	GO:0006662: glycerol ether metabolic process	1.87E-02
121	GO:0046323: glucose import	1.87E-02
122	GO:0010154: fruit development	1.87E-02
123	GO:0009790: embryo development	1.93E-02
124	GO:0015986: ATP synthesis coupled proton transport	1.97E-02
125	GO:0061025: membrane fusion	1.97E-02
126	GO:0008654: phospholipid biosynthetic process	2.07E-02
127	GO:0006623: protein targeting to vacuole	2.07E-02
128	GO:0010150: leaf senescence	2.28E-02
129	GO:0010090: trichome morphogenesis	2.38E-02
130	GO:0006914: autophagy	2.49E-02
131	GO:0010252: auxin homeostasis	2.49E-02
132	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.55E-02
133	GO:0000910: cytokinesis	2.71E-02
134	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.94E-02
135	GO:0006888: ER to Golgi vesicle-mediated transport	3.17E-02
136	GO:0006950: response to stress	3.17E-02
137	GO:0015995: chlorophyll biosynthetic process	3.17E-02
138	GO:0009826: unidimensional cell growth	3.39E-02
139	GO:0008219: cell death	3.41E-02
140	GO:0009817: defense response to fungus, incompatible interaction	3.41E-02
141	GO:0010311: lateral root formation	3.53E-02
142	GO:0048767: root hair elongation	3.53E-02
143	GO:0006499: N-terminal protein myristoylation	3.66E-02
144	GO:0009407: toxin catabolic process	3.66E-02
145	GO:0048527: lateral root development	3.78E-02
146	GO:0000724: double-strand break repair via homologous recombination	3.91E-02
147	GO:0034599: cellular response to oxidative stress	4.16E-02
148	GO:0006839: mitochondrial transport	4.43E-02
149	GO:0030001: metal ion transport	4.43E-02

Rank	GO Term	Adjusted P value
1	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
2	GO:0033961: cis-stilbene-oxide hydrolase activity	0.00E+00
3	GO:0044610: FMN transmembrane transporter activity	0.00E+00
4	GO:0047886: farnesol dehydrogenase activity	0.00E+00
5	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
6	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
7	GO:0003837: beta-ureidopropionase activity	0.00E+00
8	GO:0050152: omega-amidase activity	0.00E+00
9	GO:0032441: pheophorbide a oxygenase activity	0.00E+00
10	GO:0004298: threonine-type endopeptidase activity	5.72E-10
11	GO:0008137: NADH dehydrogenase (ubiquinone) activity	6.62E-09
12	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	8.31E-06
13	GO:0004576: oligosaccharyl transferase activity	3.46E-05
14	GO:0008177: succinate dehydrogenase (ubiquinone) activity	5.56E-05
15	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	5.56E-05
16	GO:0008233: peptidase activity	5.67E-05
17	GO:0051537: 2 iron, 2 sulfur cluster binding	1.20E-04
18	GO:0004034: aldose 1-epimerase activity	1.91E-04
19	GO:0004307: ethanolaminephosphotransferase activity	2.20E-04
20	GO:0019707: protein-cysteine S-acyltransferase activity	2.20E-04
21	GO:0015230: FAD transmembrane transporter activity	2.20E-04
22	GO:0030941: chloroplast targeting sequence binding	2.20E-04
23	GO:0016229: steroid dehydrogenase activity	2.20E-04
24	GO:0004347: glucose-6-phosphate isomerase activity	2.20E-04
25	GO:0016776: phosphotransferase activity, phosphate group as acceptor	2.20E-04
26	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	2.20E-04
27	GO:0070401: NADP+ binding	2.20E-04
28	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.20E-04
29	GO:0045437: uridine nucleosidase activity	2.20E-04
30	GO:0004452: isopentenyl-diphosphate delta-isomerase activity	2.20E-04
31	GO:0005090: Sar guanyl-nucleotide exchange factor activity	2.20E-04
32	GO:0047560: 3-dehydrosphinganine reductase activity	2.20E-04
33	GO:0004129: cytochrome-c oxidase activity	4.63E-04
34	GO:0008794: arsenate reductase (glutaredoxin) activity	4.63E-04
35	GO:0005366: myo-inositol:proton symporter activity	4.90E-04
36	GO:0015228: coenzyme A transmembrane transporter activity	4.90E-04
37	GO:0047724: inosine nucleosidase activity	4.90E-04
38	GO:0051724: NAD transporter activity	4.90E-04
39	GO:0030572: phosphatidyltransferase activity	4.90E-04
40	GO:0004142: diacylglycerol cholinephosphotransferase activity	4.90E-04
41	GO:0004089: carbonate dehydratase activity	6.01E-04
42	GO:0051539: 4 iron, 4 sulfur cluster binding	7.94E-04
43	GO:0032403: protein complex binding	7.98E-04
44	GO:0052692: raffinose alpha-galactosidase activity	7.98E-04
45	GO:0010277: chlorophyllide a oxygenase [overall] activity	7.98E-04
46	GO:0004557: alpha-galactosidase activity	7.98E-04
47	GO:0009055: electron carrier activity	8.93E-04
48	GO:0005528: FK506 binding	9.27E-04
49	GO:0015186: L-glutamine transmembrane transporter activity	1.14E-03
50	GO:0019201: nucleotide kinase activity	1.14E-03
51	GO:0016788: hydrolase activity, acting on ester bonds	1.47E-03
52	GO:0050302: indole-3-acetaldehyde oxidase activity	1.51E-03
53	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.51E-03
54	GO:0004301: epoxide hydrolase activity	1.51E-03
55	GO:0004659: prenyltransferase activity	1.51E-03
56	GO:0010011: auxin binding	1.51E-03
57	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.51E-03
58	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.72E-03
59	GO:0080122: AMP transmembrane transporter activity	1.93E-03
60	GO:0000104: succinate dehydrogenase activity	1.93E-03
61	GO:0005496: steroid binding	1.93E-03
62	GO:0051538: 3 iron, 4 sulfur cluster binding	1.93E-03
63	GO:0008198: ferrous iron binding	1.93E-03
64	GO:0022857: transmembrane transporter activity	1.94E-03
65	GO:0015035: protein disulfide oxidoreductase activity	2.17E-03
66	GO:0051117: ATPase binding	2.38E-03
67	GO:0005347: ATP transmembrane transporter activity	2.86E-03
68	GO:0051020: GTPase binding	2.86E-03
69	GO:0015217: ADP transmembrane transporter activity	2.86E-03
70	GO:0004017: adenylate kinase activity	2.86E-03
71	GO:0051213: dioxygenase activity	3.21E-03
72	GO:0008320: protein transmembrane transporter activity	3.36E-03
73	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.36E-03
74	GO:0016491: oxidoreductase activity	3.65E-03
75	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.90E-03
76	GO:0035064: methylated histone binding	3.90E-03
77	GO:0004033: aldo-keto reductase (NADP) activity	3.90E-03
78	GO:0015078: hydrogen ion transmembrane transporter activity	4.47E-03
79	GO:0050897: cobalt ion binding	4.84E-03
80	GO:0042802: identical protein binding	5.67E-03
81	GO:0047617: acyl-CoA hydrolase activity	5.68E-03
82	GO:0046961: proton-transporting ATPase activity, rotational mechanism	6.98E-03
83	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.98E-03
84	GO:0016787: hydrolase activity	9.46E-03
85	GO:0052689: carboxylic ester hydrolase activity	1.09E-02
86	GO:0051536: iron-sulfur cluster binding	1.15E-02
87	GO:0043130: ubiquitin binding	1.15E-02
88	GO:0035251: UDP-glucosyltransferase activity	1.32E-02
89	GO:0016746: transferase activity, transferring acyl groups	1.35E-02
90	GO:0047134: protein-disulfide reductase activity	1.68E-02
91	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.87E-02
92	GO:0046873: metal ion transmembrane transporter activity	1.87E-02
93	GO:0004791: thioredoxin-disulfide reductase activity	1.97E-02
94	GO:0016853: isomerase activity	1.97E-02
95	GO:0005355: glucose transmembrane transporter activity	1.97E-02
96	GO:0050662: coenzyme binding	1.97E-02
97	GO:0004872: receptor activity	2.07E-02
98	GO:0004197: cysteine-type endopeptidase activity	2.28E-02
99	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.38E-02
100	GO:0016597: amino acid binding	2.71E-02
101	GO:0015250: water channel activity	2.82E-02
102	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.05E-02
103	GO:0004683: calmodulin-dependent protein kinase activity	3.17E-02
104	GO:0005096: GTPase activator activity	3.53E-02
105	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.03E-02
106	GO:0030246: carbohydrate binding	4.65E-02
107	GO:0004364: glutathione transferase activity	4.69E-02
108	GO:0004185: serine-type carboxypeptidase activity	4.83E-02
109	GO:0005507: copper ion binding	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0005747: mitochondrial respiratory chain complex I	1.55E-12
2	GO:0005839: proteasome core complex	5.72E-10
3	GO:0000502: proteasome complex	2.59E-08
4	GO:0045273: respiratory chain complex II	3.01E-08
5	GO:0005829: cytosol	5.85E-07
6	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.65E-06
7	GO:0019773: proteasome core complex, alpha-subunit complex	5.32E-06
8	GO:0005773: vacuole	8.12E-06
9	GO:0005746: mitochondrial respiratory chain	5.56E-05
10	GO:0008250: oligosaccharyltransferase complex	5.56E-05
11	GO:0045271: respiratory chain complex I	6.57E-05
12	GO:0005774: vacuolar membrane	1.04E-04
13	GO:0019774: proteasome core complex, beta-subunit complex	2.20E-04
14	GO:0045281: succinate dehydrogenase complex	4.90E-04
15	GO:0005750: mitochondrial respiratory chain complex III	6.76E-04
16	GO:0005753: mitochondrial proton-transporting ATP synthase complex	7.56E-04
17	GO:0005838: proteasome regulatory particle	7.98E-04
18	GO:0046861: glyoxysomal membrane	7.98E-04
19	GO:0005758: mitochondrial intermembrane space	9.27E-04
20	GO:0005783: endoplasmic reticulum	9.96E-04
21	GO:0033180: proton-transporting V-type ATPase, V1 domain	1.14E-03
22	GO:0031966: mitochondrial membrane	1.22E-03
23	GO:0005789: endoplasmic reticulum membrane	1.49E-03
24	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.51E-03
25	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.51E-03
26	GO:0055035: plastid thylakoid membrane	1.93E-03
27	GO:0005739: mitochondrion	2.07E-03
28	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	2.38E-03
29	GO:0005771: multivesicular body	2.38E-03
30	GO:0030904: retromer complex	2.38E-03
31	GO:0031209: SCAR complex	2.38E-03
32	GO:0005777: peroxisome	2.74E-03
33	GO:0031359: integral component of chloroplast outer membrane	3.36E-03
34	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.36E-03
35	GO:0005788: endoplasmic reticulum lumen	3.40E-03
36	GO:0005759: mitochondrial matrix	3.71E-03
37	GO:0000421: autophagosome membrane	3.90E-03
38	GO:0009514: glyoxysome	4.47E-03
39	GO:0005779: integral component of peroxisomal membrane	4.47E-03
40	GO:0005763: mitochondrial small ribosomal subunit	5.06E-03
41	GO:0005737: cytoplasm	5.66E-03
42	GO:0008541: proteasome regulatory particle, lid subcomplex	6.98E-03
43	GO:0016020: membrane	7.24E-03
44	GO:0005764: lysosome	9.13E-03
45	GO:0030176: integral component of endoplasmic reticulum membrane	9.90E-03
46	GO:0070469: respiratory chain	1.23E-02
47	GO:0031410: cytoplasmic vesicle	1.40E-02
48	GO:0005743: mitochondrial inner membrane	1.43E-02
49	GO:0009507: chloroplast	1.77E-02
50	GO:0071944: cell periphery	2.38E-02
51	GO:0032580: Golgi cisterna membrane	2.49E-02
52	GO:0005778: peroxisomal membrane	2.60E-02
53	GO:0009536: plastid	3.33E-02
54	GO:0031969: chloroplast membrane	4.36E-02
55	GO:0031902: late endosome membrane	4.56E-02
56	GO:0090406: pollen tube	4.83E-02