co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G33670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006114: glycerol biosynthetic process	0.00E+00
2	GO:0080127: fruit septum development	0.00E+00
3	GO:0042493: response to drug	0.00E+00
4	GO:0015727: lactate transport	0.00E+00
5	GO:0006399: tRNA metabolic process	0.00E+00
6	GO:0061157: mRNA destabilization	0.00E+00
7	GO:0090706: specification of plant organ position	0.00E+00
8	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
9	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
10	GO:0015979: photosynthesis	5.72E-07
11	GO:0006021: inositol biosynthetic process	6.70E-05
12	GO:0010027: thylakoid membrane organization	7.14E-05
13	GO:0046855: inositol phosphate dephosphorylation	1.52E-04
14	GO:0010190: cytochrome b6f complex assembly	1.52E-04
15	GO:0042549: photosystem II stabilization	1.52E-04
16	GO:1901259: chloroplast rRNA processing	2.07E-04
17	GO:0043953: protein transport by the Tat complex	3.24E-04
18	GO:0000476: maturation of 4.5S rRNA	3.24E-04
19	GO:0033388: putrescine biosynthetic process from arginine	3.24E-04
20	GO:0000967: rRNA 5'-end processing	3.24E-04
21	GO:0000481: maturation of 5S rRNA	3.24E-04
22	GO:0065002: intracellular protein transmembrane transport	3.24E-04
23	GO:0043686: co-translational protein modification	3.24E-04
24	GO:0043007: maintenance of rDNA	3.24E-04
25	GO:0034337: RNA folding	3.24E-04
26	GO:0010450: inflorescence meristem growth	3.24E-04
27	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	3.24E-04
28	GO:0010493: Lewis a epitope biosynthetic process	3.24E-04
29	GO:0048564: photosystem I assembly	3.40E-04
30	GO:0006741: NADP biosynthetic process	7.07E-04
31	GO:0006432: phenylalanyl-tRNA aminoacylation	7.07E-04
32	GO:0018026: peptidyl-lysine monomethylation	7.07E-04
33	GO:0009446: putrescine biosynthetic process	7.07E-04
34	GO:0080181: lateral root branching	7.07E-04
35	GO:0034470: ncRNA processing	7.07E-04
36	GO:0009658: chloroplast organization	7.38E-04
37	GO:0015995: chlorophyll biosynthetic process	8.87E-04
38	GO:0006790: sulfur compound metabolic process	9.08E-04
39	GO:0016311: dephosphorylation	9.45E-04
40	GO:2000012: regulation of auxin polar transport	1.03E-03
41	GO:0006954: inflammatory response	1.15E-03
42	GO:0005977: glycogen metabolic process	1.15E-03
43	GO:0045165: cell fate commitment	1.15E-03
44	GO:0019674: NAD metabolic process	1.15E-03
45	GO:0009405: pathogenesis	1.15E-03
46	GO:0010207: photosystem II assembly	1.16E-03
47	GO:0046854: phosphatidylinositol phosphorylation	1.29E-03
48	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.65E-03
49	GO:0009650: UV protection	1.65E-03
50	GO:0046739: transport of virus in multicellular host	1.65E-03
51	GO:2001141: regulation of RNA biosynthetic process	1.65E-03
52	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.65E-03
53	GO:0019363: pyridine nucleotide biosynthetic process	1.65E-03
54	GO:0006020: inositol metabolic process	1.65E-03
55	GO:0010239: chloroplast mRNA processing	1.65E-03
56	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.65E-03
57	GO:0051016: barbed-end actin filament capping	1.65E-03
58	GO:0019915: lipid storage	1.93E-03
59	GO:0007219: Notch signaling pathway	2.21E-03
60	GO:0010021: amylopectin biosynthetic process	2.21E-03
61	GO:0015994: chlorophyll metabolic process	2.21E-03
62	GO:0022622: root system development	2.21E-03
63	GO:0006364: rRNA processing	2.73E-03
64	GO:0016558: protein import into peroxisome matrix	2.82E-03
65	GO:0006564: L-serine biosynthetic process	2.82E-03
66	GO:0031365: N-terminal protein amino acid modification	2.82E-03
67	GO:1902183: regulation of shoot apical meristem development	2.82E-03
68	GO:0010158: abaxial cell fate specification	2.82E-03
69	GO:1902456: regulation of stomatal opening	3.49E-03
70	GO:0042793: transcription from plastid promoter	3.49E-03
71	GO:0003006: developmental process involved in reproduction	3.49E-03
72	GO:0032502: developmental process	4.16E-03
73	GO:0030488: tRNA methylation	4.20E-03
74	GO:0010189: vitamin E biosynthetic process	4.20E-03
75	GO:0032880: regulation of protein localization	4.95E-03
76	GO:0030091: protein repair	5.76E-03
77	GO:0006605: protein targeting	5.76E-03
78	GO:0032508: DNA duplex unwinding	5.76E-03
79	GO:0000105: histidine biosynthetic process	5.76E-03
80	GO:0009231: riboflavin biosynthetic process	5.76E-03
81	GO:0016559: peroxisome fission	5.76E-03
82	GO:0009657: plastid organization	6.60E-03
83	GO:0017004: cytochrome complex assembly	6.60E-03
84	GO:0010093: specification of floral organ identity	6.60E-03
85	GO:0071482: cellular response to light stimulus	6.60E-03
86	GO:0010497: plasmodesmata-mediated intercellular transport	6.60E-03
87	GO:0048507: meristem development	7.48E-03
88	GO:0010206: photosystem II repair	7.48E-03
89	GO:2000024: regulation of leaf development	7.48E-03
90	GO:0010205: photoinhibition	8.41E-03
91	GO:0009637: response to blue light	9.33E-03
92	GO:0006949: syncytium formation	9.37E-03
93	GO:0019684: photosynthesis, light reaction	1.04E-02
94	GO:0006415: translational termination	1.04E-02
95	GO:0009089: lysine biosynthetic process via diaminopimelate	1.04E-02
96	GO:0043085: positive regulation of catalytic activity	1.04E-02
97	GO:1903507: negative regulation of nucleic acid-templated transcription	1.04E-02
98	GO:0006352: DNA-templated transcription, initiation	1.04E-02
99	GO:0018119: peptidyl-cysteine S-nitrosylation	1.04E-02
100	GO:0016485: protein processing	1.04E-02
101	GO:0009773: photosynthetic electron transport in photosystem I	1.04E-02
102	GO:0010582: floral meristem determinacy	1.14E-02
103	GO:0005983: starch catabolic process	1.14E-02
104	GO:0010114: response to red light	1.21E-02
105	GO:0006807: nitrogen compound metabolic process	1.25E-02
106	GO:0010628: positive regulation of gene expression	1.25E-02
107	GO:0009933: meristem structural organization	1.36E-02
108	GO:0048467: gynoecium development	1.36E-02
109	GO:0010020: chloroplast fission	1.36E-02
110	GO:0019853: L-ascorbic acid biosynthetic process	1.48E-02
111	GO:0010030: positive regulation of seed germination	1.48E-02
112	GO:0009664: plant-type cell wall organization	1.52E-02
113	GO:0006863: purine nucleobase transport	1.60E-02
114	GO:0006833: water transport	1.60E-02
115	GO:0000162: tryptophan biosynthetic process	1.60E-02
116	GO:0009944: polarity specification of adaxial/abaxial axis	1.72E-02
117	GO:0009768: photosynthesis, light harvesting in photosystem I	1.84E-02
118	GO:0019953: sexual reproduction	1.84E-02
119	GO:0048511: rhythmic process	1.97E-02
120	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.10E-02
121	GO:0009411: response to UV	2.23E-02
122	GO:0071369: cellular response to ethylene stimulus	2.23E-02
123	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.23E-02
124	GO:0009306: protein secretion	2.37E-02
125	GO:0006396: RNA processing	2.39E-02
126	GO:0008284: positive regulation of cell proliferation	2.51E-02
127	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.51E-02
128	GO:0034220: ion transmembrane transport	2.65E-02
129	GO:0042631: cellular response to water deprivation	2.65E-02
130	GO:0010154: fruit development	2.80E-02
131	GO:0009958: positive gravitropism	2.80E-02
132	GO:0048868: pollen tube development	2.80E-02
133	GO:0046323: glucose import	2.80E-02
134	GO:0042752: regulation of circadian rhythm	2.95E-02
135	GO:0032259: methylation	3.04E-02
136	GO:0016042: lipid catabolic process	3.09E-02
137	GO:0019252: starch biosynthetic process	3.10E-02
138	GO:0008654: phospholipid biosynthetic process	3.10E-02
139	GO:0002229: defense response to oomycetes	3.25E-02
140	GO:0010193: response to ozone	3.25E-02
141	GO:0006635: fatty acid beta-oxidation	3.25E-02
142	GO:0071554: cell wall organization or biogenesis	3.25E-02
143	GO:0009790: embryo development	3.40E-02
144	GO:1901657: glycosyl compound metabolic process	3.57E-02
145	GO:0009828: plant-type cell wall loosening	3.73E-02
146	GO:0009567: double fertilization forming a zygote and endosperm	3.73E-02
147	GO:0005975: carbohydrate metabolic process	3.96E-02
148	GO:0001666: response to hypoxia	4.23E-02
149	GO:0009627: systemic acquired resistance	4.57E-02
150	GO:0042128: nitrate assimilation	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0042623: ATPase activity, coupled	0.00E+00
2	GO:0010276: phytol kinase activity	0.00E+00
3	GO:0050126: N-carbamoylputrescine amidase activity	0.00E+00
4	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
5	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
6	GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity	0.00E+00
7	GO:0015129: lactate transmembrane transporter activity	0.00E+00
8	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
9	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
10	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
11	GO:0052832: inositol monophosphate 3-phosphatase activity	4.77E-06
12	GO:0008934: inositol monophosphate 1-phosphatase activity	4.77E-06
13	GO:0052833: inositol monophosphate 4-phosphatase activity	4.77E-06
14	GO:0004462: lactoylglutathione lyase activity	1.52E-04
15	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.07E-04
16	GO:0042586: peptide deformylase activity	3.24E-04
17	GO:0019203: carbohydrate phosphatase activity	3.24E-04
18	GO:0042736: NADH kinase activity	3.24E-04
19	GO:0010347: L-galactose-1-phosphate phosphatase activity	3.24E-04
20	GO:0046920: alpha-(1->3)-fucosyltransferase activity	3.24E-04
21	GO:0050308: sugar-phosphatase activity	3.24E-04
22	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.51E-04
23	GO:0016630: protochlorophyllide reductase activity	7.07E-04
24	GO:0019172: glyoxalase III activity	7.07E-04
25	GO:0019156: isoamylase activity	7.07E-04
26	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	7.07E-04
27	GO:0047746: chlorophyllase activity	7.07E-04
28	GO:0009977: proton motive force dependent protein transmembrane transporter activity	7.07E-04
29	GO:0004617: phosphoglycerate dehydrogenase activity	7.07E-04
30	GO:0030385: ferredoxin:thioredoxin reductase activity	7.07E-04
31	GO:0004826: phenylalanine-tRNA ligase activity	7.07E-04
32	GO:0090729: toxin activity	1.15E-03
33	GO:0004751: ribose-5-phosphate isomerase activity	1.15E-03
34	GO:0003993: acid phosphatase activity	1.43E-03
35	GO:0005528: FK506 binding	1.59E-03
36	GO:0016851: magnesium chelatase activity	1.65E-03
37	GO:0016149: translation release factor activity, codon specific	1.65E-03
38	GO:0005354: galactose transmembrane transporter activity	1.65E-03
39	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	2.21E-03
40	GO:0016279: protein-lysine N-methyltransferase activity	2.21E-03
41	GO:0001053: plastid sigma factor activity	2.21E-03
42	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.21E-03
43	GO:0004045: aminoacyl-tRNA hydrolase activity	2.21E-03
44	GO:0080032: methyl jasmonate esterase activity	2.21E-03
45	GO:0016987: sigma factor activity	2.21E-03
46	GO:0016788: hydrolase activity, acting on ester bonds	3.48E-03
47	GO:0042578: phosphoric ester hydrolase activity	3.49E-03
48	GO:0004556: alpha-amylase activity	3.49E-03
49	GO:2001070: starch binding	3.49E-03
50	GO:0004605: phosphatidate cytidylyltransferase activity	3.49E-03
51	GO:0080030: methyl indole-3-acetate esterase activity	3.49E-03
52	GO:0008195: phosphatidate phosphatase activity	4.20E-03
53	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	4.20E-03
54	GO:0015250: water channel activity	5.63E-03
55	GO:0043022: ribosome binding	5.76E-03
56	GO:0003951: NAD+ kinase activity	6.60E-03
57	GO:0008173: RNA methyltransferase activity	6.60E-03
58	GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity	6.60E-03
59	GO:0103095: wax ester synthase activity	6.60E-03
60	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	7.48E-03
61	GO:0003747: translation release factor activity	7.48E-03
62	GO:0008417: fucosyltransferase activity	7.48E-03
63	GO:0015020: glucuronosyltransferase activity	9.37E-03
64	GO:0000049: tRNA binding	1.14E-02
65	GO:0004521: endoribonuclease activity	1.14E-02
66	GO:0008083: growth factor activity	1.36E-02
67	GO:0004175: endopeptidase activity	1.36E-02
68	GO:0031409: pigment binding	1.60E-02
69	GO:0003714: transcription corepressor activity	1.72E-02
70	GO:0005345: purine nucleobase transmembrane transporter activity	1.84E-02
71	GO:0052689: carboxylic ester hydrolase activity	2.23E-02
72	GO:0003727: single-stranded RNA binding	2.37E-02
73	GO:0016787: hydrolase activity	2.80E-02
74	GO:0019843: rRNA binding	2.91E-02
75	GO:0005355: glucose transmembrane transporter activity	2.95E-02
76	GO:0016491: oxidoreductase activity	3.14E-02
77	GO:0048038: quinone binding	3.25E-02
78	GO:0016597: amino acid binding	4.06E-02
79	GO:0016413: O-acetyltransferase activity	4.06E-02
80	GO:0008017: microtubule binding	4.19E-02
81	GO:0016168: chlorophyll binding	4.40E-02
82	GO:0102483: scopolin beta-glucosidase activity	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009349: riboflavin synthase complex	0.00E+00
3	GO:0043235: receptor complex	0.00E+00
4	GO:0009507: chloroplast	5.71E-40
5	GO:0009535: chloroplast thylakoid membrane	3.70E-20
6	GO:0009570: chloroplast stroma	3.74E-10
7	GO:0009534: chloroplast thylakoid	5.18E-10
8	GO:0009543: chloroplast thylakoid lumen	4.30E-09
9	GO:0031977: thylakoid lumen	1.18E-06
10	GO:0030095: chloroplast photosystem II	2.38E-06
11	GO:0009579: thylakoid	4.56E-06
12	GO:0009538: photosystem I reaction center	9.59E-06
13	GO:0009941: chloroplast envelope	2.07E-05
14	GO:0010287: plastoglobule	1.60E-04
15	GO:0070765: gamma-secretase complex	3.24E-04
16	GO:0031361: integral component of thylakoid membrane	3.24E-04
17	GO:0009523: photosystem II	4.13E-04
18	GO:0042644: chloroplast nucleoid	5.01E-04
19	GO:0008290: F-actin capping protein complex	7.07E-04
20	GO:0000427: plastid-encoded plastid RNA polymerase complex	7.07E-04
21	GO:0009508: plastid chromosome	1.03E-03
22	GO:0033281: TAT protein transport complex	1.15E-03
23	GO:0010007: magnesium chelatase complex	1.15E-03
24	GO:0009531: secondary cell wall	1.65E-03
25	GO:0042646: plastid nucleoid	1.65E-03
26	GO:0009533: chloroplast stromal thylakoid	4.95E-03
27	GO:0009295: nucleoid	5.01E-03
28	GO:0009707: chloroplast outer membrane	7.35E-03
29	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	7.48E-03
30	GO:0055028: cortical microtubule	9.37E-03
31	GO:0090404: pollen tube tip	1.04E-02
32	GO:0012511: monolayer-surrounded lipid storage body	1.04E-02
33	GO:0016020: membrane	1.10E-02
34	GO:0032040: small-subunit processome	1.14E-02
35	GO:0005887: integral component of plasma membrane	1.35E-02
36	GO:0030076: light-harvesting complex	1.48E-02
37	GO:0009654: photosystem II oxygen evolving complex	1.84E-02
38	GO:0031969: chloroplast membrane	1.97E-02
39	GO:0009522: photosystem I	2.95E-02
40	GO:0019898: extrinsic component of membrane	3.10E-02
41	GO:0016592: mediator complex	3.41E-02
42	GO:0032580: Golgi cisterna membrane	3.73E-02
43	GO:0005778: peroxisomal membrane	3.89E-02
44	GO:0030529: intracellular ribonucleoprotein complex	4.23E-02