GO Enrichment Analysis of Co-expressed Genes with
AT4G33500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 2 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 3 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 4 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 5 | GO:0006000: fructose metabolic process | 5.28E-08 |
| 6 | GO:0006002: fructose 6-phosphate metabolic process | 2.58E-06 |
| 7 | GO:0009773: photosynthetic electron transport in photosystem I | 6.19E-06 |
| 8 | GO:0019253: reductive pentose-phosphate cycle | 1.03E-05 |
| 9 | GO:0000481: maturation of 5S rRNA | 1.21E-05 |
| 10 | GO:0043609: regulation of carbon utilization | 1.21E-05 |
| 11 | GO:0034337: RNA folding | 1.21E-05 |
| 12 | GO:0006432: phenylalanyl-tRNA aminoacylation | 3.21E-05 |
| 13 | GO:0097054: L-glutamate biosynthetic process | 3.21E-05 |
| 14 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.21E-05 |
| 15 | GO:0019252: starch biosynthetic process | 4.31E-05 |
| 16 | GO:0005977: glycogen metabolic process | 5.78E-05 |
| 17 | GO:0006537: glutamate biosynthetic process | 8.79E-05 |
| 18 | GO:0006020: inositol metabolic process | 8.79E-05 |
| 19 | GO:0006021: inositol biosynthetic process | 1.22E-04 |
| 20 | GO:0010021: amylopectin biosynthetic process | 1.22E-04 |
| 21 | GO:0019676: ammonia assimilation cycle | 1.22E-04 |
| 22 | GO:0015994: chlorophyll metabolic process | 1.22E-04 |
| 23 | GO:0016123: xanthophyll biosynthetic process | 1.59E-04 |
| 24 | GO:0006465: signal peptide processing | 1.59E-04 |
| 25 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.98E-04 |
| 26 | GO:0046855: inositol phosphate dephosphorylation | 1.98E-04 |
| 27 | GO:0009793: embryo development ending in seed dormancy | 2.55E-04 |
| 28 | GO:0032508: DNA duplex unwinding | 3.27E-04 |
| 29 | GO:0016559: peroxisome fission | 3.27E-04 |
| 30 | GO:0009642: response to light intensity | 3.27E-04 |
| 31 | GO:0010206: photosystem II repair | 4.21E-04 |
| 32 | GO:0006790: sulfur compound metabolic process | 6.23E-04 |
| 33 | GO:0006006: glucose metabolic process | 6.76E-04 |
| 34 | GO:0006094: gluconeogenesis | 6.76E-04 |
| 35 | GO:0005986: sucrose biosynthetic process | 6.76E-04 |
| 36 | GO:0010020: chloroplast fission | 7.31E-04 |
| 37 | GO:0046854: phosphatidylinositol phosphorylation | 7.88E-04 |
| 38 | GO:0008299: isoprenoid biosynthetic process | 9.61E-04 |
| 39 | GO:0015979: photosynthesis | 1.16E-03 |
| 40 | GO:0016117: carotenoid biosynthetic process | 1.27E-03 |
| 41 | GO:0009791: post-embryonic development | 1.54E-03 |
| 42 | GO:0016311: dephosphorylation | 2.38E-03 |
| 43 | GO:0006499: N-terminal protein myristoylation | 2.63E-03 |
| 44 | GO:0007568: aging | 2.71E-03 |
| 45 | GO:0016051: carbohydrate biosynthetic process | 2.89E-03 |
| 46 | GO:0009853: photorespiration | 2.89E-03 |
| 47 | GO:0009744: response to sucrose | 3.43E-03 |
| 48 | GO:0006855: drug transmembrane transport | 3.80E-03 |
| 49 | GO:0006414: translational elongation | 3.85E-03 |
| 50 | GO:0006096: glycolytic process | 4.70E-03 |
| 51 | GO:0009845: seed germination | 6.58E-03 |
| 52 | GO:0007623: circadian rhythm | 7.79E-03 |
| 53 | GO:0005975: carbohydrate metabolic process | 7.91E-03 |
| 54 | GO:0046686: response to cadmium ion | 8.12E-03 |
| 55 | GO:0009658: chloroplast organization | 1.06E-02 |
| 56 | GO:0009737: response to abscisic acid | 1.11E-02 |
| 57 | GO:0055114: oxidation-reduction process | 1.30E-02 |
| 58 | GO:0009416: response to light stimulus | 2.44E-02 |
| 59 | GO:0042742: defense response to bacterium | 4.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 2 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 3 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 4 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 5 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 6 | GO:0016041: glutamate synthase (ferredoxin) activity | 1.21E-05 |
| 7 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 1.21E-05 |
| 8 | GO:0019156: isoamylase activity | 3.21E-05 |
| 9 | GO:0010291: carotene beta-ring hydroxylase activity | 3.21E-05 |
| 10 | GO:0047746: chlorophyllase activity | 3.21E-05 |
| 11 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.21E-05 |
| 12 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.21E-05 |
| 13 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.21E-05 |
| 14 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.21E-05 |
| 15 | GO:0004826: phenylalanine-tRNA ligase activity | 3.21E-05 |
| 16 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.21E-05 |
| 17 | GO:0070402: NADPH binding | 5.78E-05 |
| 18 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 5.78E-05 |
| 19 | GO:0004792: thiosulfate sulfurtransferase activity | 8.79E-05 |
| 20 | GO:0003746: translation elongation factor activity | 1.25E-04 |
| 21 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.59E-04 |
| 22 | GO:0004556: alpha-amylase activity | 1.98E-04 |
| 23 | GO:2001070: starch binding | 1.98E-04 |
| 24 | GO:0042578: phosphoric ester hydrolase activity | 1.98E-04 |
| 25 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.39E-04 |
| 26 | GO:0008135: translation factor activity, RNA binding | 3.73E-04 |
| 27 | GO:0000049: tRNA binding | 6.23E-04 |
| 28 | GO:0042802: identical protein binding | 6.94E-04 |
| 29 | GO:0016853: isomerase activity | 1.47E-03 |
| 30 | GO:0003924: GTPase activity | 1.48E-03 |
| 31 | GO:0015238: drug transmembrane transporter activity | 2.55E-03 |
| 32 | GO:0030145: manganese ion binding | 2.71E-03 |
| 33 | GO:0003993: acid phosphatase activity | 2.97E-03 |
| 34 | GO:0050661: NADP binding | 3.15E-03 |
| 35 | GO:0051287: NAD binding | 3.90E-03 |
| 36 | GO:0005525: GTP binding | 4.25E-03 |
| 37 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 6.35E-03 |
| 38 | GO:0004252: serine-type endopeptidase activity | 6.70E-03 |
| 39 | GO:0015297: antiporter activity | 7.55E-03 |
| 40 | GO:0003729: mRNA binding | 7.75E-03 |
| 41 | GO:0008017: microtubule binding | 8.05E-03 |
| 42 | GO:0016787: hydrolase activity | 1.12E-02 |
| 43 | GO:0046872: metal ion binding | 1.70E-02 |
| 44 | GO:0019825: oxygen binding | 3.14E-02 |
| 45 | GO:0005509: calcium ion binding | 3.81E-02 |
| 46 | GO:0005506: iron ion binding | 3.99E-02 |
| 47 | GO:0003723: RNA binding | 4.08E-02 |
| 48 | GO:0005215: transporter activity | 4.34E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 7.70E-16 |
| 3 | GO:0009570: chloroplast stroma | 9.46E-14 |
| 4 | GO:0009534: chloroplast thylakoid | 3.32E-10 |
| 5 | GO:0009941: chloroplast envelope | 7.88E-10 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 1.05E-06 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.43E-05 |
| 8 | GO:0005759: mitochondrial matrix | 2.08E-05 |
| 9 | GO:0009579: thylakoid | 2.13E-05 |
| 10 | GO:0031977: thylakoid lumen | 1.51E-04 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.21E-04 |
| 12 | GO:0048046: apoplast | 5.20E-04 |
| 13 | GO:0032040: small-subunit processome | 6.23E-04 |
| 14 | GO:0030095: chloroplast photosystem II | 7.31E-04 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 9.61E-04 |
| 16 | GO:0031969: chloroplast membrane | 1.02E-03 |
| 17 | GO:0019898: extrinsic component of membrane | 1.54E-03 |
| 18 | GO:0009707: chloroplast outer membrane | 2.46E-03 |
| 19 | GO:0005777: peroxisome | 2.69E-02 |
| 20 | GO:0016020: membrane | 2.97E-02 |