GO Enrichment Analysis of Co-expressed Genes with
AT4G33100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090239: regulation of histone H4 acetylation | 0.00E+00 |
| 2 | GO:0001881: receptor recycling | 0.00E+00 |
| 3 | GO:0006412: translation | 9.81E-14 |
| 4 | GO:0042254: ribosome biogenesis | 4.40E-10 |
| 5 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.86E-07 |
| 6 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.47E-06 |
| 7 | GO:0043248: proteasome assembly | 3.53E-05 |
| 8 | GO:0051788: response to misfolded protein | 3.03E-04 |
| 9 | GO:0043981: histone H4-K5 acetylation | 3.03E-04 |
| 10 | GO:0008333: endosome to lysosome transport | 4.99E-04 |
| 11 | GO:1902626: assembly of large subunit precursor of preribosome | 4.99E-04 |
| 12 | GO:0009410: response to xenobiotic stimulus | 4.99E-04 |
| 13 | GO:0009647: skotomorphogenesis | 7.14E-04 |
| 14 | GO:0006168: adenine salvage | 7.14E-04 |
| 15 | GO:0001676: long-chain fatty acid metabolic process | 7.14E-04 |
| 16 | GO:0006166: purine ribonucleoside salvage | 7.14E-04 |
| 17 | GO:0010363: regulation of plant-type hypersensitive response | 9.47E-04 |
| 18 | GO:0046686: response to cadmium ion | 1.19E-03 |
| 19 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.20E-03 |
| 20 | GO:0007029: endoplasmic reticulum organization | 1.20E-03 |
| 21 | GO:0044209: AMP salvage | 1.20E-03 |
| 22 | GO:0045116: protein neddylation | 1.20E-03 |
| 23 | GO:0030163: protein catabolic process | 1.25E-03 |
| 24 | GO:0006914: autophagy | 1.33E-03 |
| 25 | GO:0006574: valine catabolic process | 1.47E-03 |
| 26 | GO:0009554: megasporogenesis | 1.76E-03 |
| 27 | GO:1901001: negative regulation of response to salt stress | 1.76E-03 |
| 28 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 2.06E-03 |
| 29 | GO:0048528: post-embryonic root development | 2.06E-03 |
| 30 | GO:0010043: response to zinc ion | 2.37E-03 |
| 31 | GO:0009690: cytokinin metabolic process | 2.39E-03 |
| 32 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.39E-03 |
| 33 | GO:0098656: anion transmembrane transport | 3.08E-03 |
| 34 | GO:0046685: response to arsenic-containing substance | 3.08E-03 |
| 35 | GO:0009245: lipid A biosynthetic process | 3.08E-03 |
| 36 | GO:0043069: negative regulation of programmed cell death | 3.84E-03 |
| 37 | GO:0072593: reactive oxygen species metabolic process | 4.24E-03 |
| 38 | GO:0016925: protein sumoylation | 4.65E-03 |
| 39 | GO:0006820: anion transport | 4.65E-03 |
| 40 | GO:0006626: protein targeting to mitochondrion | 5.08E-03 |
| 41 | GO:2000028: regulation of photoperiodism, flowering | 5.08E-03 |
| 42 | GO:0007034: vacuolar transport | 5.52E-03 |
| 43 | GO:0010167: response to nitrate | 5.97E-03 |
| 44 | GO:0006406: mRNA export from nucleus | 6.91E-03 |
| 45 | GO:0006289: nucleotide-excision repair | 6.91E-03 |
| 46 | GO:0006487: protein N-linked glycosylation | 6.91E-03 |
| 47 | GO:0009116: nucleoside metabolic process | 6.91E-03 |
| 48 | GO:0000027: ribosomal large subunit assembly | 6.91E-03 |
| 49 | GO:0009863: salicylic acid mediated signaling pathway | 6.91E-03 |
| 50 | GO:0015992: proton transport | 7.91E-03 |
| 51 | GO:0061077: chaperone-mediated protein folding | 7.91E-03 |
| 52 | GO:0009814: defense response, incompatible interaction | 8.42E-03 |
| 53 | GO:0007005: mitochondrion organization | 8.42E-03 |
| 54 | GO:0042147: retrograde transport, endosome to Golgi | 1.00E-02 |
| 55 | GO:0015991: ATP hydrolysis coupled proton transport | 1.06E-02 |
| 56 | GO:0006662: glycerol ether metabolic process | 1.12E-02 |
| 57 | GO:0009908: flower development | 1.14E-02 |
| 58 | GO:0009735: response to cytokinin | 1.16E-02 |
| 59 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.23E-02 |
| 60 | GO:0048825: cotyledon development | 1.24E-02 |
| 61 | GO:0006623: protein targeting to vacuole | 1.24E-02 |
| 62 | GO:0010183: pollen tube guidance | 1.24E-02 |
| 63 | GO:0010193: response to ozone | 1.30E-02 |
| 64 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.30E-02 |
| 65 | GO:0009817: defense response to fungus, incompatible interaction | 2.03E-02 |
| 66 | GO:0006499: N-terminal protein myristoylation | 2.18E-02 |
| 67 | GO:0016192: vesicle-mediated transport | 2.23E-02 |
| 68 | GO:0000724: double-strand break repair via homologous recombination | 2.33E-02 |
| 69 | GO:0034599: cellular response to oxidative stress | 2.48E-02 |
| 70 | GO:0045454: cell redox homeostasis | 2.53E-02 |
| 71 | GO:0006631: fatty acid metabolic process | 2.72E-02 |
| 72 | GO:0009793: embryo development ending in seed dormancy | 2.90E-02 |
| 73 | GO:0009846: pollen germination | 3.39E-02 |
| 74 | GO:0009736: cytokinin-activated signaling pathway | 3.56E-02 |
| 75 | GO:0015031: protein transport | 4.22E-02 |
| 76 | GO:0009651: response to salt stress | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016881: acid-amino acid ligase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 7.07E-19 |
| 3 | GO:0004298: threonine-type endopeptidase activity | 4.21E-13 |
| 4 | GO:0008233: peptidase activity | 2.36E-08 |
| 5 | GO:0019786: Atg8-specific protease activity | 1.31E-04 |
| 6 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 1.31E-04 |
| 7 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 1.31E-04 |
| 8 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 1.31E-04 |
| 9 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 1.31E-04 |
| 10 | GO:0019779: Atg8 activating enzyme activity | 3.03E-04 |
| 11 | GO:0019781: NEDD8 activating enzyme activity | 3.03E-04 |
| 12 | GO:0003999: adenine phosphoribosyltransferase activity | 7.14E-04 |
| 13 | GO:0070628: proteasome binding | 9.47E-04 |
| 14 | GO:0004576: oligosaccharyl transferase activity | 9.47E-04 |
| 15 | GO:0019776: Atg8 ligase activity | 9.47E-04 |
| 16 | GO:0016004: phospholipase activator activity | 9.47E-04 |
| 17 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 9.47E-04 |
| 18 | GO:0019843: rRNA binding | 1.12E-03 |
| 19 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.20E-03 |
| 20 | GO:0031386: protein tag | 1.20E-03 |
| 21 | GO:0008641: small protein activating enzyme activity | 1.20E-03 |
| 22 | GO:0031593: polyubiquitin binding | 1.47E-03 |
| 23 | GO:0031177: phosphopantetheine binding | 1.47E-03 |
| 24 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.47E-03 |
| 25 | GO:0000035: acyl binding | 1.76E-03 |
| 26 | GO:0051920: peroxiredoxin activity | 1.76E-03 |
| 27 | GO:0102391: decanoate--CoA ligase activity | 1.76E-03 |
| 28 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.06E-03 |
| 29 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 2.06E-03 |
| 30 | GO:0015288: porin activity | 2.39E-03 |
| 31 | GO:0016209: antioxidant activity | 2.39E-03 |
| 32 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 2.39E-03 |
| 33 | GO:0003746: translation elongation factor activity | 2.59E-03 |
| 34 | GO:0008308: voltage-gated anion channel activity | 2.73E-03 |
| 35 | GO:0003729: mRNA binding | 4.14E-03 |
| 36 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 4.24E-03 |
| 37 | GO:0008327: methyl-CpG binding | 4.24E-03 |
| 38 | GO:0003712: transcription cofactor activity | 5.97E-03 |
| 39 | GO:0005515: protein binding | 6.57E-03 |
| 40 | GO:0043130: ubiquitin binding | 6.91E-03 |
| 41 | GO:0005528: FK506 binding | 6.91E-03 |
| 42 | GO:0047134: protein-disulfide reductase activity | 1.00E-02 |
| 43 | GO:0004791: thioredoxin-disulfide reductase activity | 1.18E-02 |
| 44 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.42E-02 |
| 45 | GO:0003684: damaged DNA binding | 1.49E-02 |
| 46 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.03E-02 |
| 47 | GO:0050897: cobalt ion binding | 2.25E-02 |
| 48 | GO:0005198: structural molecule activity | 3.13E-02 |
| 49 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.22E-02 |
| 50 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.56E-02 |
| 51 | GO:0022857: transmembrane transporter activity | 4.39E-02 |
| 52 | GO:0015035: protein disulfide oxidoreductase activity | 4.67E-02 |
| 53 | GO:0016887: ATPase activity | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 2.54E-18 |
| 2 | GO:0022626: cytosolic ribosome | 6.24E-16 |
| 3 | GO:0005840: ribosome | 1.01E-14 |
| 4 | GO:0005839: proteasome core complex | 4.21E-13 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 1.79E-12 |
| 6 | GO:0005829: cytosol | 4.50E-09 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 1.38E-07 |
| 8 | GO:0005773: vacuole | 5.39E-06 |
| 9 | GO:0015934: large ribosomal subunit | 1.31E-05 |
| 10 | GO:0005737: cytoplasm | 2.41E-05 |
| 11 | GO:0005774: vacuolar membrane | 2.89E-05 |
| 12 | GO:0000421: autophagosome membrane | 8.68E-05 |
| 13 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.09E-04 |
| 14 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.24E-04 |
| 15 | GO:0005750: mitochondrial respiratory chain complex III | 3.34E-04 |
| 16 | GO:0046861: glyoxysomal membrane | 4.99E-04 |
| 17 | GO:0031410: cytoplasmic vesicle | 6.13E-04 |
| 18 | GO:0033180: proton-transporting V-type ATPase, V1 domain | 7.14E-04 |
| 19 | GO:1990726: Lsm1-7-Pat1 complex | 7.14E-04 |
| 20 | GO:0005775: vacuolar lumen | 7.14E-04 |
| 21 | GO:0005776: autophagosome | 9.47E-04 |
| 22 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 9.47E-04 |
| 23 | GO:0008250: oligosaccharyltransferase complex | 1.20E-03 |
| 24 | GO:0005771: multivesicular body | 1.47E-03 |
| 25 | GO:0030904: retromer complex | 1.47E-03 |
| 26 | GO:0016020: membrane | 1.92E-03 |
| 27 | GO:0009506: plasmodesma | 1.93E-03 |
| 28 | GO:0005688: U6 snRNP | 2.39E-03 |
| 29 | GO:0005618: cell wall | 2.40E-03 |
| 30 | GO:0046930: pore complex | 2.73E-03 |
| 31 | GO:0009514: glyoxysome | 2.73E-03 |
| 32 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 2.73E-03 |
| 33 | GO:0031090: organelle membrane | 3.08E-03 |
| 34 | GO:0071011: precatalytic spliceosome | 3.46E-03 |
| 35 | GO:0005886: plasma membrane | 3.53E-03 |
| 36 | GO:0071013: catalytic step 2 spliceosome | 4.24E-03 |
| 37 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.65E-03 |
| 38 | GO:0000419: DNA-directed RNA polymerase V complex | 6.43E-03 |
| 39 | GO:0005758: mitochondrial intermembrane space | 6.91E-03 |
| 40 | GO:0005732: small nucleolar ribonucleoprotein complex | 6.93E-03 |
| 41 | GO:0070469: respiratory chain | 7.40E-03 |
| 42 | GO:0005741: mitochondrial outer membrane | 7.91E-03 |
| 43 | GO:0016592: mediator complex | 1.36E-02 |
| 44 | GO:0000932: P-body | 1.68E-02 |
| 45 | GO:0005788: endoplasmic reticulum lumen | 1.75E-02 |
| 46 | GO:0005730: nucleolus | 1.82E-02 |
| 47 | GO:0005874: microtubule | 2.04E-02 |
| 48 | GO:0005783: endoplasmic reticulum | 2.23E-02 |
| 49 | GO:0031902: late endosome membrane | 2.72E-02 |
| 50 | GO:0090406: pollen tube | 2.88E-02 |
| 51 | GO:0009507: chloroplast | 4.37E-02 |