co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G33090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015833: peptide transport	0.00E+00
2	GO:0010202: response to low fluence red light stimulus	0.00E+00
3	GO:0017012: protein-phytochromobilin linkage	0.00E+00
4	GO:0019566: arabinose metabolic process	0.00E+00
5	GO:0042908: xenobiotic transport	0.00E+00
6	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
7	GO:0006592: ornithine biosynthetic process	0.00E+00
8	GO:0006593: ornithine catabolic process	0.00E+00
9	GO:0010255: glucose mediated signaling pathway	8.23E-07
10	GO:0006560: proline metabolic process	3.64E-05
11	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	3.64E-05
12	GO:0061014: positive regulation of mRNA catabolic process	3.64E-05
13	GO:0010265: SCF complex assembly	3.64E-05
14	GO:0019544: arginine catabolic process to glutamate	3.64E-05
15	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	3.64E-05
16	GO:0030010: establishment of cell polarity	9.09E-05
17	GO:0019388: galactose catabolic process	9.09E-05
18	GO:0010617: circadian regulation of calcium ion oscillation	9.09E-05
19	GO:0042939: tripeptide transport	9.09E-05
20	GO:0010133: proline catabolic process to glutamate	9.09E-05
21	GO:0010498: proteasomal protein catabolic process	1.58E-04
22	GO:0046034: ATP metabolic process	1.58E-04
23	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.58E-04
24	GO:0051646: mitochondrion localization	1.58E-04
25	GO:0030835: negative regulation of actin filament depolymerization	1.58E-04
26	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	1.58E-04
27	GO:0006081: cellular aldehyde metabolic process	1.58E-04
28	GO:0005975: carbohydrate metabolic process	1.96E-04
29	GO:0009630: gravitropism	2.26E-04
30	GO:0010148: transpiration	2.33E-04
31	GO:0015700: arsenite transport	2.33E-04
32	GO:0010587: miRNA catabolic process	2.33E-04
33	GO:0009590: detection of gravity	2.33E-04
34	GO:0051259: protein oligomerization	2.33E-04
35	GO:0009584: detection of visible light	2.33E-04
36	GO:0010286: heat acclimation	2.74E-04
37	GO:0006221: pyrimidine nucleotide biosynthetic process	3.14E-04
38	GO:0009649: entrainment of circadian clock	3.14E-04
39	GO:0044205: 'de novo' UMP biosynthetic process	3.14E-04
40	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	3.14E-04
41	GO:0042938: dipeptide transport	3.14E-04
42	GO:0009687: abscisic acid metabolic process	3.14E-04
43	GO:0009816: defense response to bacterium, incompatible interaction	3.27E-04
44	GO:2000762: regulation of phenylpropanoid metabolic process	4.01E-04
45	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	4.92E-04
46	GO:0006561: proline biosynthetic process	4.92E-04
47	GO:0042732: D-xylose metabolic process	4.92E-04
48	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	5.88E-04
49	GO:0031930: mitochondria-nucleus signaling pathway	5.88E-04
50	GO:0010019: chloroplast-nucleus signaling pathway	5.88E-04
51	GO:0010555: response to mannitol	5.88E-04
52	GO:2000067: regulation of root morphogenesis	5.88E-04
53	GO:0051693: actin filament capping	6.87E-04
54	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	6.87E-04
55	GO:0070370: cellular heat acclimation	6.87E-04
56	GO:0010044: response to aluminum ion	6.87E-04
57	GO:0010374: stomatal complex development	6.87E-04
58	GO:0010161: red light signaling pathway	6.87E-04
59	GO:0005978: glycogen biosynthetic process	7.90E-04
60	GO:0006402: mRNA catabolic process	7.90E-04
61	GO:0040029: regulation of gene expression, epigenetic	7.90E-04
62	GO:0009880: embryonic pattern specification	8.97E-04
63	GO:0007186: G-protein coupled receptor signaling pathway	8.97E-04
64	GO:0006526: arginine biosynthetic process	8.97E-04
65	GO:0015996: chlorophyll catabolic process	8.97E-04
66	GO:0006098: pentose-phosphate shunt	1.01E-03
67	GO:0080144: amino acid homeostasis	1.01E-03
68	GO:0046685: response to arsenic-containing substance	1.01E-03
69	GO:0042761: very long-chain fatty acid biosynthetic process	1.12E-03
70	GO:0009638: phototropism	1.12E-03
71	GO:0046686: response to cadmium ion	1.20E-03
72	GO:0006325: chromatin organization	1.24E-03
73	GO:0009698: phenylpropanoid metabolic process	1.36E-03
74	GO:0072593: reactive oxygen species metabolic process	1.36E-03
75	GO:0009750: response to fructose	1.36E-03
76	GO:0018119: peptidyl-cysteine S-nitrosylation	1.36E-03
77	GO:0048229: gametophyte development	1.36E-03
78	GO:0006006: glucose metabolic process	1.62E-03
79	GO:2000028: regulation of photoperiodism, flowering	1.62E-03
80	GO:0006094: gluconeogenesis	1.62E-03
81	GO:0009266: response to temperature stimulus	1.76E-03
82	GO:0051017: actin filament bundle assembly	2.18E-03
83	GO:0009695: jasmonic acid biosynthetic process	2.33E-03
84	GO:0009269: response to desiccation	2.48E-03
85	GO:0031408: oxylipin biosynthetic process	2.48E-03
86	GO:0003333: amino acid transmembrane transport	2.48E-03
87	GO:0061077: chaperone-mediated protein folding	2.48E-03
88	GO:0030433: ubiquitin-dependent ERAD pathway	2.64E-03
89	GO:0001944: vasculature development	2.80E-03
90	GO:0006012: galactose metabolic process	2.80E-03
91	GO:0010584: pollen exine formation	2.96E-03
92	GO:0009826: unidimensional cell growth	3.01E-03
93	GO:0010051: xylem and phloem pattern formation	3.30E-03
94	GO:0015991: ATP hydrolysis coupled proton transport	3.30E-03
95	GO:0010154: fruit development	3.47E-03
96	GO:0009749: response to glucose	3.82E-03
97	GO:0019252: starch biosynthetic process	3.82E-03
98	GO:1901657: glycosyl compound metabolic process	4.37E-03
99	GO:0055114: oxidation-reduction process	4.51E-03
100	GO:0010029: regulation of seed germination	5.35E-03
101	GO:0009817: defense response to fungus, incompatible interaction	6.18E-03
102	GO:0018298: protein-chromophore linkage	6.18E-03
103	GO:0008219: cell death	6.18E-03
104	GO:0006811: ion transport	6.61E-03
105	GO:0010218: response to far red light	6.61E-03
106	GO:0048527: lateral root development	6.83E-03
107	GO:0009867: jasmonic acid mediated signaling pathway	7.28E-03
108	GO:0006631: fatty acid metabolic process	8.21E-03
109	GO:0009640: photomorphogenesis	8.68E-03
110	GO:0009744: response to sucrose	8.68E-03
111	GO:0006855: drug transmembrane transport	9.68E-03
112	GO:0031347: regulation of defense response	9.93E-03
113	GO:0042538: hyperosmotic salinity response	1.02E-02
114	GO:0009585: red, far-red light phototransduction	1.07E-02
115	GO:0035556: intracellular signal transduction	1.07E-02
116	GO:0009736: cytokinin-activated signaling pathway	1.07E-02
117	GO:0006096: glycolytic process	1.20E-02
118	GO:0009626: plant-type hypersensitive response	1.26E-02
119	GO:0055085: transmembrane transport	1.28E-02
120	GO:0006457: protein folding	1.31E-02
121	GO:0009553: embryo sac development	1.34E-02
122	GO:0018105: peptidyl-serine phosphorylation	1.40E-02
123	GO:0009651: response to salt stress	1.68E-02
124	GO:0042744: hydrogen peroxide catabolic process	1.76E-02
125	GO:0009790: embryo development	1.80E-02
126	GO:0071555: cell wall organization	2.05E-02
127	GO:0009451: RNA modification	2.06E-02
128	GO:0010228: vegetative to reproductive phase transition of meristem	2.09E-02
129	GO:0030154: cell differentiation	2.24E-02
130	GO:0010468: regulation of gene expression	2.29E-02
131	GO:0006810: transport	3.02E-02
132	GO:0009723: response to ethylene	3.06E-02
133	GO:0046777: protein autophosphorylation	3.38E-02
134	GO:0044550: secondary metabolite biosynthetic process	3.42E-02
135	GO:0015979: photosynthesis	3.54E-02
136	GO:0045454: cell redox homeostasis	3.66E-02
137	GO:0045892: negative regulation of transcription, DNA-templated	3.70E-02
138	GO:0009408: response to heat	4.25E-02
139	GO:0009737: response to abscisic acid	4.36E-02
140	GO:0048364: root development	4.38E-02
141	GO:0006397: mRNA processing	4.38E-02

Rank	GO Term	Adjusted P value
1	GO:0009045: xylose isomerase activity	0.00E+00
2	GO:0015197: peptide transporter activity	0.00E+00
3	GO:0015334: high-affinity oligopeptide transporter activity	0.00E+00
4	GO:0031517: red light photoreceptor activity	0.00E+00
5	GO:0004151: dihydroorotase activity	0.00E+00
6	GO:0009702: L-arabinokinase activity	0.00E+00
7	GO:0032441: pheophorbide a oxygenase activity	0.00E+00
8	GO:0003842: 1-pyrroline-5-carboxylate dehydrogenase activity	0.00E+00
9	GO:0008777: acetylornithine deacetylase activity	0.00E+00
10	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
11	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
12	GO:0004557: alpha-galactosidase activity	3.39E-07
13	GO:0052692: raffinose alpha-galactosidase activity	3.39E-07
14	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	2.32E-05
15	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	3.64E-05
16	GO:0030544: Hsp70 protein binding	3.64E-05
17	GO:1990841: promoter-specific chromatin binding	3.64E-05
18	GO:0004321: fatty-acyl-CoA synthase activity	3.64E-05
19	GO:0071992: phytochelatin transmembrane transporter activity	3.64E-05
20	GO:0031516: far-red light photoreceptor activity	3.64E-05
21	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	3.64E-05
22	GO:0004347: glucose-6-phosphate isomerase activity	3.64E-05
23	GO:0004534: 5'-3' exoribonuclease activity	9.09E-05
24	GO:0004614: phosphoglucomutase activity	9.09E-05
25	GO:0042937: tripeptide transporter activity	9.09E-05
26	GO:0009883: red or far-red light photoreceptor activity	9.09E-05
27	GO:0031683: G-protein beta/gamma-subunit complex binding	1.58E-04
28	GO:0008020: G-protein coupled photoreceptor activity	1.58E-04
29	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	1.58E-04
30	GO:0001664: G-protein coupled receptor binding	1.58E-04
31	GO:0010277: chlorophyllide a oxygenase [overall] activity	1.58E-04
32	GO:0016656: monodehydroascorbate reductase (NADH) activity	2.33E-04
33	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	3.14E-04
34	GO:0004335: galactokinase activity	3.14E-04
35	GO:0008409: 5'-3' exonuclease activity	3.14E-04
36	GO:0042936: dipeptide transporter activity	3.14E-04
37	GO:0004029: aldehyde dehydrogenase (NAD) activity	4.92E-04
38	GO:0036402: proteasome-activating ATPase activity	4.92E-04
39	GO:0004034: aldose 1-epimerase activity	7.90E-04
40	GO:0016207: 4-coumarate-CoA ligase activity	1.01E-03
41	GO:0004673: protein histidine kinase activity	1.24E-03
42	GO:0008559: xenobiotic-transporting ATPase activity	1.36E-03
43	GO:0031072: heat shock protein binding	1.62E-03
44	GO:0000155: phosphorelay sensor kinase activity	1.62E-03
45	GO:0017025: TBP-class protein binding	1.89E-03
46	GO:0005528: FK506 binding	2.18E-03
47	GO:0051536: iron-sulfur cluster binding	2.18E-03
48	GO:0005516: calmodulin binding	2.49E-03
49	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.58E-03
50	GO:0042802: identical protein binding	2.58E-03
51	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	3.47E-03
52	GO:0050660: flavin adenine dinucleotide binding	3.61E-03
53	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.37E-03
54	GO:0051015: actin filament binding	4.37E-03
55	GO:0008237: metallopeptidase activity	4.75E-03
56	GO:0004871: signal transducer activity	4.84E-03
57	GO:0051213: dioxygenase activity	5.15E-03
58	GO:0009931: calcium-dependent protein serine/threonine kinase activity	5.55E-03
59	GO:0102483: scopolin beta-glucosidase activity	5.76E-03
60	GO:0004683: calmodulin-dependent protein kinase activity	5.76E-03
61	GO:0005524: ATP binding	5.94E-03
62	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	6.61E-03
63	GO:0050897: cobalt ion binding	6.83E-03
64	GO:0008422: beta-glucosidase activity	7.74E-03
65	GO:0051537: 2 iron, 2 sulfur cluster binding	9.17E-03
66	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.68E-03
67	GO:0015171: amino acid transmembrane transporter activity	1.15E-02
68	GO:0016874: ligase activity	1.32E-02
69	GO:0022857: transmembrane transporter activity	1.32E-02
70	GO:0051082: unfolded protein binding	1.37E-02
71	GO:0030170: pyridoxal phosphate binding	1.73E-02
72	GO:0046872: metal ion binding	1.89E-02
73	GO:0005215: transporter activity	2.27E-02
74	GO:0016491: oxidoreductase activity	2.70E-02
75	GO:0000287: magnesium ion binding	2.72E-02
76	GO:0042803: protein homodimerization activity	3.78E-02
77	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.86E-02
78	GO:0003924: GTPase activity	4.25E-02
79	GO:0009055: electron carrier activity	4.46E-02
80	GO:0004519: endonuclease activity	4.51E-02

Rank	GO Term	Adjusted P value
1	GO:0005773: vacuole	1.01E-05
2	GO:0000325: plant-type vacuole	1.84E-05
3	GO:0005774: vacuolar membrane	2.31E-05
4	GO:0005782: peroxisomal matrix	1.58E-04
5	GO:0005759: mitochondrial matrix	1.68E-04
6	GO:0033180: proton-transporting V-type ATPase, V1 domain	2.33E-04
7	GO:0005777: peroxisome	2.54E-04
8	GO:0005829: cytosol	2.70E-04
9	GO:0005844: polysome	3.14E-04
10	GO:0031597: cytosolic proteasome complex	5.88E-04
11	GO:0031595: nuclear proteasome complex	6.87E-04
12	GO:0010494: cytoplasmic stress granule	1.01E-03
13	GO:0016604: nuclear body	1.12E-03
14	GO:0008540: proteasome regulatory particle, base subcomplex	1.12E-03
15	GO:0009705: plant-type vacuole membrane	2.04E-03
16	GO:0048046: apoplast	4.32E-03
17	GO:0010319: stromule	4.75E-03
18	GO:0000932: P-body	5.15E-03
19	GO:0005886: plasma membrane	5.29E-03
20	GO:0016020: membrane	5.38E-03
21	GO:0000502: proteasome complex	1.07E-02
22	GO:0005783: endoplasmic reticulum	1.16E-02
23	GO:0005737: cytoplasm	1.20E-02
24	GO:0016607: nuclear speck	1.23E-02
25	GO:0005834: heterotrimeric G-protein complex	1.26E-02
26	GO:0009706: chloroplast inner membrane	1.37E-02
27	GO:0005794: Golgi apparatus	1.54E-02
28	GO:0009506: plasmodesma	3.01E-02
29	GO:0009535: chloroplast thylakoid membrane	4.58E-02