GO Enrichment Analysis of Co-expressed Genes with
AT4G32900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015822: ornithine transport | 0.00E+00 |
| 2 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 3 | GO:0036172: thiamine salvage | 0.00E+00 |
| 4 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 5 | GO:0006720: isoprenoid metabolic process | 0.00E+00 |
| 6 | GO:0048870: cell motility | 0.00E+00 |
| 7 | GO:0009249: protein lipoylation | 0.00E+00 |
| 8 | GO:0016487: farnesol metabolic process | 1.06E-04 |
| 9 | GO:0016031: tRNA import into mitochondrion | 1.06E-04 |
| 10 | GO:0000066: mitochondrial ornithine transport | 1.06E-04 |
| 11 | GO:2000071: regulation of defense response by callose deposition | 2.48E-04 |
| 12 | GO:0007163: establishment or maintenance of cell polarity | 2.48E-04 |
| 13 | GO:0016122: xanthophyll metabolic process | 2.48E-04 |
| 14 | GO:0009150: purine ribonucleotide metabolic process | 4.12E-04 |
| 15 | GO:0071492: cellular response to UV-A | 4.12E-04 |
| 16 | GO:0010476: gibberellin mediated signaling pathway | 4.12E-04 |
| 17 | GO:0010325: raffinose family oligosaccharide biosynthetic process | 4.12E-04 |
| 18 | GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation | 4.12E-04 |
| 19 | GO:0009399: nitrogen fixation | 5.92E-04 |
| 20 | GO:0009963: positive regulation of flavonoid biosynthetic process | 5.92E-04 |
| 21 | GO:0009647: skotomorphogenesis | 5.92E-04 |
| 22 | GO:0009765: photosynthesis, light harvesting | 7.86E-04 |
| 23 | GO:0051567: histone H3-K9 methylation | 7.86E-04 |
| 24 | GO:0009649: entrainment of circadian clock | 7.86E-04 |
| 25 | GO:0008295: spermidine biosynthetic process | 7.86E-04 |
| 26 | GO:0034613: cellular protein localization | 7.86E-04 |
| 27 | GO:0006542: glutamine biosynthetic process | 7.86E-04 |
| 28 | GO:0071486: cellular response to high light intensity | 7.86E-04 |
| 29 | GO:0009939: positive regulation of gibberellic acid mediated signaling pathway | 7.86E-04 |
| 30 | GO:0030041: actin filament polymerization | 9.92E-04 |
| 31 | GO:0010117: photoprotection | 9.92E-04 |
| 32 | GO:0046283: anthocyanin-containing compound metabolic process | 9.92E-04 |
| 33 | GO:0009229: thiamine diphosphate biosynthetic process | 9.92E-04 |
| 34 | GO:0009107: lipoate biosynthetic process | 9.92E-04 |
| 35 | GO:0006555: methionine metabolic process | 1.21E-03 |
| 36 | GO:0031053: primary miRNA processing | 1.21E-03 |
| 37 | GO:0007035: vacuolar acidification | 1.21E-03 |
| 38 | GO:0009228: thiamine biosynthetic process | 1.21E-03 |
| 39 | GO:0042793: transcription from plastid promoter | 1.21E-03 |
| 40 | GO:0010190: cytochrome b6f complex assembly | 1.21E-03 |
| 41 | GO:0033365: protein localization to organelle | 1.21E-03 |
| 42 | GO:0016458: gene silencing | 1.21E-03 |
| 43 | GO:0016070: RNA metabolic process | 1.21E-03 |
| 44 | GO:0019509: L-methionine salvage from methylthioadenosine | 1.45E-03 |
| 45 | GO:0000054: ribosomal subunit export from nucleus | 1.45E-03 |
| 46 | GO:0048444: floral organ morphogenesis | 1.45E-03 |
| 47 | GO:0045292: mRNA cis splicing, via spliceosome | 1.97E-03 |
| 48 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.97E-03 |
| 49 | GO:0009704: de-etiolation | 1.97E-03 |
| 50 | GO:0045010: actin nucleation | 1.97E-03 |
| 51 | GO:0019430: removal of superoxide radicals | 2.24E-03 |
| 52 | GO:0009056: catabolic process | 2.53E-03 |
| 53 | GO:0000902: cell morphogenesis | 2.53E-03 |
| 54 | GO:0098656: anion transmembrane transport | 2.53E-03 |
| 55 | GO:1900865: chloroplast RNA modification | 2.84E-03 |
| 56 | GO:0009688: abscisic acid biosynthetic process | 3.15E-03 |
| 57 | GO:0009641: shade avoidance | 3.15E-03 |
| 58 | GO:0009682: induced systemic resistance | 3.47E-03 |
| 59 | GO:0006790: sulfur compound metabolic process | 3.81E-03 |
| 60 | GO:0048440: carpel development | 4.52E-03 |
| 61 | GO:0006306: DNA methylation | 6.46E-03 |
| 62 | GO:0016226: iron-sulfur cluster assembly | 6.87E-03 |
| 63 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 6.87E-03 |
| 64 | GO:0007005: mitochondrion organization | 6.87E-03 |
| 65 | GO:0010118: stomatal movement | 8.64E-03 |
| 66 | GO:0006606: protein import into nucleus | 8.64E-03 |
| 67 | GO:0015991: ATP hydrolysis coupled proton transport | 8.64E-03 |
| 68 | GO:0008654: phospholipid biosynthetic process | 1.01E-02 |
| 69 | GO:0002229: defense response to oomycetes | 1.06E-02 |
| 70 | GO:0030163: protein catabolic process | 1.16E-02 |
| 71 | GO:0010090: trichome morphogenesis | 1.16E-02 |
| 72 | GO:0009658: chloroplast organization | 1.27E-02 |
| 73 | GO:0042128: nitrate assimilation | 1.48E-02 |
| 74 | GO:0048573: photoperiodism, flowering | 1.54E-02 |
| 75 | GO:0048527: lateral root development | 1.83E-02 |
| 76 | GO:0010119: regulation of stomatal movement | 1.83E-02 |
| 77 | GO:0009867: jasmonic acid mediated signaling pathway | 1.95E-02 |
| 78 | GO:0006839: mitochondrial transport | 2.14E-02 |
| 79 | GO:0009640: photomorphogenesis | 2.34E-02 |
| 80 | GO:0031347: regulation of defense response | 2.68E-02 |
| 81 | GO:0009809: lignin biosynthetic process | 2.89E-02 |
| 82 | GO:0009585: red, far-red light phototransduction | 2.89E-02 |
| 83 | GO:0010224: response to UV-B | 2.97E-02 |
| 84 | GO:0006417: regulation of translation | 3.11E-02 |
| 85 | GO:0009620: response to fungus | 3.49E-02 |
| 86 | GO:0006810: transport | 3.52E-02 |
| 87 | GO:0000398: mRNA splicing, via spliceosome | 4.12E-02 |
| 88 | GO:0009058: biosynthetic process | 4.53E-02 |
| 89 | GO:0042744: hydrogen peroxide catabolic process | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052671: geranylgeraniol kinase activity | 0.00E+00 |
| 2 | GO:0052669: CTP:2-trans,-6-trans-farnesol kinase activity | 0.00E+00 |
| 3 | GO:0008170: N-methyltransferase activity | 0.00E+00 |
| 4 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 5 | GO:0052670: geraniol kinase activity | 0.00E+00 |
| 6 | GO:0052668: farnesol kinase activity | 0.00E+00 |
| 7 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 8 | GO:0009008: DNA-methyltransferase activity | 0.00E+00 |
| 9 | GO:0000064: L-ornithine transmembrane transporter activity | 2.48E-04 |
| 10 | GO:0017118: lipoyltransferase activity | 2.48E-04 |
| 11 | GO:0010331: gibberellin binding | 2.48E-04 |
| 12 | GO:0016415: octanoyltransferase activity | 2.48E-04 |
| 13 | GO:0004766: spermidine synthase activity | 2.48E-04 |
| 14 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 4.12E-04 |
| 15 | GO:0004848: ureidoglycolate hydrolase activity | 4.12E-04 |
| 16 | GO:0032403: protein complex binding | 4.12E-04 |
| 17 | GO:0017176: phosphatidylinositol N-acetylglucosaminyltransferase activity | 4.12E-04 |
| 18 | GO:0008265: Mo-molybdopterin cofactor sulfurase activity | 4.12E-04 |
| 19 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 5.92E-04 |
| 20 | GO:0000339: RNA cap binding | 5.92E-04 |
| 21 | GO:0047627: adenylylsulfatase activity | 5.92E-04 |
| 22 | GO:0005319: lipid transporter activity | 7.86E-04 |
| 23 | GO:0005496: steroid binding | 9.92E-04 |
| 24 | GO:0004356: glutamate-ammonia ligase activity | 9.92E-04 |
| 25 | GO:0030151: molybdenum ion binding | 9.92E-04 |
| 26 | GO:0004784: superoxide dismutase activity | 1.21E-03 |
| 27 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.21E-03 |
| 28 | GO:0070300: phosphatidic acid binding | 1.45E-03 |
| 29 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 1.45E-03 |
| 30 | GO:0016621: cinnamoyl-CoA reductase activity | 1.70E-03 |
| 31 | GO:0005515: protein binding | 2.00E-03 |
| 32 | GO:0015078: hydrogen ion transmembrane transporter activity | 2.24E-03 |
| 33 | GO:0071949: FAD binding | 2.53E-03 |
| 34 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 3.47E-03 |
| 35 | GO:0015266: protein channel activity | 4.16E-03 |
| 36 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.16E-03 |
| 37 | GO:0031072: heat shock protein binding | 4.16E-03 |
| 38 | GO:0051082: unfolded protein binding | 4.75E-03 |
| 39 | GO:0004386: helicase activity | 5.18E-03 |
| 40 | GO:0015144: carbohydrate transmembrane transporter activity | 7.10E-03 |
| 41 | GO:0008514: organic anion transmembrane transporter activity | 7.74E-03 |
| 42 | GO:0005351: sugar:proton symporter activity | 8.01E-03 |
| 43 | GO:0008080: N-acetyltransferase activity | 9.10E-03 |
| 44 | GO:0050662: coenzyme binding | 9.58E-03 |
| 45 | GO:0042802: identical protein binding | 1.04E-02 |
| 46 | GO:0048038: quinone binding | 1.06E-02 |
| 47 | GO:0016168: chlorophyll binding | 1.42E-02 |
| 48 | GO:0008375: acetylglucosaminyltransferase activity | 1.48E-02 |
| 49 | GO:0008233: peptidase activity | 1.55E-02 |
| 50 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.65E-02 |
| 51 | GO:0016787: hydrolase activity | 1.67E-02 |
| 52 | GO:0003824: catalytic activity | 2.45E-02 |
| 53 | GO:0043621: protein self-association | 2.47E-02 |
| 54 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.47E-02 |
| 55 | GO:0005198: structural molecule activity | 2.54E-02 |
| 56 | GO:0022857: transmembrane transporter activity | 3.56E-02 |
| 57 | GO:0016887: ATPase activity | 3.61E-02 |
| 58 | GO:0003723: RNA binding | 4.23E-02 |
| 59 | GO:0003676: nucleic acid binding | 4.36E-02 |
| 60 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.45E-02 |
| 61 | GO:0030170: pyridoxal phosphate binding | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.40E-07 |
| 2 | GO:0000152: nuclear ubiquitin ligase complex | 1.06E-04 |
| 3 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 1.06E-04 |
| 4 | GO:0005845: mRNA cap binding complex | 1.06E-04 |
| 5 | GO:0005846: nuclear cap binding complex | 2.48E-04 |
| 6 | GO:0042646: plastid nucleoid | 5.92E-04 |
| 7 | GO:0009517: PSII associated light-harvesting complex II | 7.86E-04 |
| 8 | GO:0033179: proton-transporting V-type ATPase, V0 domain | 7.86E-04 |
| 9 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 9.92E-04 |
| 10 | GO:0009295: nucleoid | 1.07E-03 |
| 11 | GO:0031209: SCAR complex | 1.21E-03 |
| 12 | GO:0042644: chloroplast nucleoid | 2.53E-03 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.53E-03 |
| 14 | GO:0031969: chloroplast membrane | 2.63E-03 |
| 15 | GO:0016604: nuclear body | 2.84E-03 |
| 16 | GO:0009508: plastid chromosome | 4.16E-03 |
| 17 | GO:0009941: chloroplast envelope | 5.87E-03 |
| 18 | GO:0042651: thylakoid membrane | 6.05E-03 |
| 19 | GO:0009536: plastid | 7.21E-03 |
| 20 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 7.74E-03 |
| 21 | GO:0009523: photosystem II | 1.01E-02 |
| 22 | GO:0071944: cell periphery | 1.16E-02 |
| 23 | GO:0005778: peroxisomal membrane | 1.26E-02 |
| 24 | GO:0009707: chloroplast outer membrane | 1.65E-02 |
| 25 | GO:0009535: chloroplast thylakoid membrane | 1.79E-02 |
| 26 | GO:0005856: cytoskeleton | 2.54E-02 |
| 27 | GO:0016607: nuclear speck | 3.33E-02 |
| 28 | GO:0012505: endomembrane system | 3.64E-02 |
| 29 | GO:0009706: chloroplast inner membrane | 3.72E-02 |
| 30 | GO:0005654: nucleoplasm | 4.28E-02 |
| 31 | GO:0005623: cell | 4.45E-02 |