co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G32520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0036172: thiamine salvage	0.00E+00
2	GO:0046085: adenosine metabolic process	0.00E+00
3	GO:0016031: tRNA import into mitochondrion	4.74E-05
4	GO:0009116: nucleoside metabolic process	1.14E-04
5	GO:0006432: phenylalanyl-tRNA aminoacylation	1.17E-04
6	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	1.17E-04
7	GO:0009220: pyrimidine ribonucleotide biosynthetic process	1.17E-04
8	GO:0006591: ornithine metabolic process	2.00E-04
9	GO:0008216: spermidine metabolic process	2.00E-04
10	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	2.00E-04
11	GO:0009399: nitrogen fixation	2.94E-04
12	GO:0080156: mitochondrial mRNA modification	2.99E-04
13	GO:0008295: spermidine biosynthetic process	3.94E-04
14	GO:0006749: glutathione metabolic process	3.94E-04
15	GO:0044205: 'de novo' UMP biosynthetic process	3.94E-04
16	GO:0009165: nucleotide biosynthetic process	3.94E-04
17	GO:0006542: glutamine biosynthetic process	3.94E-04
18	GO:1900864: mitochondrial RNA modification	3.94E-04
19	GO:0009229: thiamine diphosphate biosynthetic process	5.00E-04
20	GO:0031053: primary miRNA processing	6.13E-04
21	GO:0000741: karyogamy	6.13E-04
22	GO:0009228: thiamine biosynthetic process	6.13E-04
23	GO:0033365: protein localization to organelle	6.13E-04
24	GO:0016070: RNA metabolic process	6.13E-04
25	GO:0000054: ribosomal subunit export from nucleus	7.31E-04
26	GO:0009099: valine biosynthetic process	7.31E-04
27	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	8.54E-04
28	GO:0045292: mRNA cis splicing, via spliceosome	9.81E-04
29	GO:0009097: isoleucine biosynthetic process	1.11E-03
30	GO:0010100: negative regulation of photomorphogenesis	1.11E-03
31	GO:0006526: arginine biosynthetic process	1.11E-03
32	GO:0006281: DNA repair	1.12E-03
33	GO:0009245: lipid A biosynthetic process	1.25E-03
34	GO:0098656: anion transmembrane transport	1.25E-03
35	GO:0009098: leucine biosynthetic process	1.40E-03
36	GO:1900865: chloroplast RNA modification	1.40E-03
37	GO:0010020: chloroplast fission	2.20E-03
38	GO:0034976: response to endoplasmic reticulum stress	2.56E-03
39	GO:0016226: iron-sulfur cluster assembly	3.32E-03
40	GO:0007005: mitochondrion organization	3.32E-03
41	GO:0006606: protein import into nucleus	4.15E-03
42	GO:0006520: cellular amino acid metabolic process	4.37E-03
43	GO:0010197: polar nucleus fusion	4.37E-03
44	GO:0010090: trichome morphogenesis	5.52E-03
45	GO:0016126: sterol biosynthetic process	6.50E-03
46	GO:0042128: nitrate assimilation	7.01E-03
47	GO:0006888: ER to Golgi vesicle-mediated transport	7.28E-03
48	GO:0032259: methylation	7.65E-03
49	GO:0009407: toxin catabolic process	8.37E-03
50	GO:0000154: rRNA modification	1.20E-02
51	GO:0009636: response to toxic substance	1.20E-02
52	GO:0009965: leaf morphogenesis	1.20E-02
53	GO:0009809: lignin biosynthetic process	1.36E-02
54	GO:0009585: red, far-red light phototransduction	1.36E-02
55	GO:0010224: response to UV-B	1.39E-02
56	GO:0016569: covalent chromatin modification	1.67E-02
57	GO:0006396: RNA processing	1.78E-02
58	GO:0000398: mRNA splicing, via spliceosome	1.93E-02
59	GO:0006633: fatty acid biosynthetic process	2.41E-02
60	GO:0016036: cellular response to phosphate starvation	2.45E-02
61	GO:0009826: unidimensional cell growth	3.42E-02
62	GO:0015031: protein transport	3.66E-02
63	GO:0080167: response to karrikin	4.09E-02
64	GO:0046686: response to cadmium ion	4.48E-02
65	GO:0045454: cell redox homeostasis	4.65E-02
66	GO:0006869: lipid transport	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0004585: ornithine carbamoyltransferase activity	0.00E+00
2	GO:0004588: orotate phosphoribosyltransferase activity	0.00E+00
3	GO:0004590: orotidine-5'-phosphate decarboxylase activity	0.00E+00
4	GO:0004417: hydroxyethylthiazole kinase activity	0.00E+00
5	GO:0072547: tricoumaroylspermidine meta-hydroxylase activity	4.74E-05
6	GO:0072549: monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity	4.74E-05
7	GO:0072548: dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity	4.74E-05
8	GO:0004826: phenylalanine-tRNA ligase activity	1.17E-04
9	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.17E-04
10	GO:0016743: carboxyl- or carbamoyltransferase activity	1.17E-04
11	GO:0004766: spermidine synthase activity	1.17E-04
12	GO:0004848: ureidoglycolate hydrolase activity	2.00E-04
13	GO:0008649: rRNA methyltransferase activity	2.00E-04
14	GO:0017176: phosphatidylinositol N-acetylglucosaminyltransferase activity	2.00E-04
15	GO:0000254: C-4 methylsterol oxidase activity	2.94E-04
16	GO:0052656: L-isoleucine transaminase activity	2.94E-04
17	GO:0000339: RNA cap binding	2.94E-04
18	GO:0052654: L-leucine transaminase activity	2.94E-04
19	GO:0052655: L-valine transaminase activity	2.94E-04
20	GO:0004749: ribose phosphate diphosphokinase activity	2.94E-04
21	GO:0004084: branched-chain-amino-acid transaminase activity	3.94E-04
22	GO:0005319: lipid transporter activity	3.94E-04
23	GO:0004356: glutamate-ammonia ligase activity	5.00E-04
24	GO:0031177: phosphopantetheine binding	6.13E-04
25	GO:0000035: acyl binding	7.31E-04
26	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	9.81E-04
27	GO:0004525: ribonuclease III activity	9.81E-04
28	GO:0003824: catalytic activity	1.19E-03
29	GO:0047617: acyl-CoA hydrolase activity	1.40E-03
30	GO:0008047: enzyme activator activity	1.55E-03
31	GO:0000049: tRNA binding	1.86E-03
32	GO:0015266: protein channel activity	2.03E-03
33	GO:0005315: inorganic phosphate transmembrane transporter activity	2.03E-03
34	GO:0003756: protein disulfide isomerase activity	3.73E-03
35	GO:0008514: organic anion transmembrane transporter activity	3.73E-03
36	GO:0008168: methyltransferase activity	4.22E-03
37	GO:0008080: N-acetyltransferase activity	4.37E-03
38	GO:0016597: amino acid binding	6.25E-03
39	GO:0008375: acetylglucosaminyltransferase activity	7.01E-03
40	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	7.81E-03
41	GO:0003924: GTPase activity	7.99E-03
42	GO:0050897: cobalt ion binding	8.65E-03
43	GO:0003697: single-stranded DNA binding	9.22E-03
44	GO:0004364: glutathione transferase activity	1.07E-02
45	GO:0043621: protein self-association	1.16E-02
46	GO:0005515: protein binding	1.30E-02
47	GO:0003723: RNA binding	2.30E-02
48	GO:0015144: carbohydrate transmembrane transporter activity	2.33E-02
49	GO:0005525: GTP binding	2.34E-02
50	GO:0005351: sugar:proton symporter activity	2.53E-02
51	GO:0016788: hydrolase activity, acting on ester bonds	3.56E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.39E-05
2	GO:0043190: ATP-binding cassette (ABC) transporter complex	4.74E-05
3	GO:0005845: mRNA cap binding complex	4.74E-05
4	GO:0005846: nuclear cap binding complex	1.17E-04
5	GO:0005829: cytosol	2.92E-04
6	GO:0032588: trans-Golgi network membrane	6.13E-04
7	GO:0009706: chloroplast inner membrane	1.66E-03
8	GO:0009941: chloroplast envelope	2.76E-03
9	GO:0070469: respiratory chain	2.93E-03
10	GO:0015935: small ribosomal subunit	3.12E-03
11	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.73E-03
12	GO:0009707: chloroplast outer membrane	7.81E-03
13	GO:0005739: mitochondrion	1.67E-02
14	GO:0009570: chloroplast stroma	1.78E-02
15	GO:0005623: cell	2.09E-02
16	GO:0005840: ribosome	3.02E-02
17	GO:0009536: plastid	3.54E-02
18	GO:0005737: cytoplasm	3.72E-02
19	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.75E-02
20	GO:0031969: chloroplast membrane	4.09E-02
21	GO:0005789: endoplasmic reticulum membrane	4.39E-02
22	GO:0005773: vacuole	4.57E-02