GO Enrichment Analysis of Co-expressed Genes with
AT4G31350
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036172: thiamine salvage | 0.00E+00 |
| 2 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 3 | GO:0009236: cobalamin biosynthetic process | 0.00E+00 |
| 4 | GO:0006720: isoprenoid metabolic process | 0.00E+00 |
| 5 | GO:0015822: ornithine transport | 0.00E+00 |
| 6 | GO:0009231: riboflavin biosynthetic process | 3.30E-05 |
| 7 | GO:0000066: mitochondrial ornithine transport | 7.07E-05 |
| 8 | GO:0019354: siroheme biosynthetic process | 7.07E-05 |
| 9 | GO:0016487: farnesol metabolic process | 7.07E-05 |
| 10 | GO:0009853: photorespiration | 8.17E-05 |
| 11 | GO:2000071: regulation of defense response by callose deposition | 1.70E-04 |
| 12 | GO:0006432: phenylalanyl-tRNA aminoacylation | 1.70E-04 |
| 13 | GO:0016122: xanthophyll metabolic process | 1.70E-04 |
| 14 | GO:0015992: proton transport | 2.46E-04 |
| 15 | GO:0016255: attachment of GPI anchor to protein | 2.86E-04 |
| 16 | GO:0071492: cellular response to UV-A | 2.86E-04 |
| 17 | GO:0010351: lithium ion transport | 2.86E-04 |
| 18 | GO:0006012: galactose metabolic process | 2.95E-04 |
| 19 | GO:0015991: ATP hydrolysis coupled proton transport | 3.77E-04 |
| 20 | GO:0009399: nitrogen fixation | 4.15E-04 |
| 21 | GO:0009963: positive regulation of flavonoid biosynthetic process | 4.15E-04 |
| 22 | GO:0009647: skotomorphogenesis | 4.15E-04 |
| 23 | GO:0009649: entrainment of circadian clock | 5.53E-04 |
| 24 | GO:0034613: cellular protein localization | 5.53E-04 |
| 25 | GO:0006542: glutamine biosynthetic process | 5.53E-04 |
| 26 | GO:0071486: cellular response to high light intensity | 5.53E-04 |
| 27 | GO:0009765: photosynthesis, light harvesting | 5.53E-04 |
| 28 | GO:0098719: sodium ion import across plasma membrane | 7.00E-04 |
| 29 | GO:0010117: photoprotection | 7.00E-04 |
| 30 | GO:0046283: anthocyanin-containing compound metabolic process | 7.00E-04 |
| 31 | GO:0009229: thiamine diphosphate biosynthetic process | 7.00E-04 |
| 32 | GO:0007035: vacuolar acidification | 8.57E-04 |
| 33 | GO:0009228: thiamine biosynthetic process | 8.57E-04 |
| 34 | GO:0006796: phosphate-containing compound metabolic process | 8.57E-04 |
| 35 | GO:0009117: nucleotide metabolic process | 8.57E-04 |
| 36 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 1.02E-03 |
| 37 | GO:0022904: respiratory electron transport chain | 1.19E-03 |
| 38 | GO:0010161: red light signaling pathway | 1.19E-03 |
| 39 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.37E-03 |
| 40 | GO:0000028: ribosomal small subunit assembly | 1.37E-03 |
| 41 | GO:0009737: response to abscisic acid | 1.75E-03 |
| 42 | GO:0098656: anion transmembrane transport | 1.76E-03 |
| 43 | GO:0051453: regulation of intracellular pH | 1.97E-03 |
| 44 | GO:0010224: response to UV-B | 2.03E-03 |
| 45 | GO:0009688: abscisic acid biosynthetic process | 2.19E-03 |
| 46 | GO:0009641: shade avoidance | 2.19E-03 |
| 47 | GO:0009682: induced systemic resistance | 2.41E-03 |
| 48 | GO:0052544: defense response by callose deposition in cell wall | 2.41E-03 |
| 49 | GO:0009785: blue light signaling pathway | 2.88E-03 |
| 50 | GO:0006006: glucose metabolic process | 2.88E-03 |
| 51 | GO:0048440: carpel development | 3.12E-03 |
| 52 | GO:0019853: L-ascorbic acid biosynthetic process | 3.37E-03 |
| 53 | GO:0019915: lipid storage | 4.44E-03 |
| 54 | GO:0061077: chaperone-mediated protein folding | 4.44E-03 |
| 55 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 4.73E-03 |
| 56 | GO:0010118: stomatal movement | 5.93E-03 |
| 57 | GO:0006814: sodium ion transport | 6.56E-03 |
| 58 | GO:0008654: phospholipid biosynthetic process | 6.89E-03 |
| 59 | GO:0002229: defense response to oomycetes | 7.22E-03 |
| 60 | GO:0010090: trichome morphogenesis | 7.90E-03 |
| 61 | GO:0071805: potassium ion transmembrane transport | 8.61E-03 |
| 62 | GO:0042128: nitrate assimilation | 1.01E-02 |
| 63 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.05E-02 |
| 64 | GO:0048573: photoperiodism, flowering | 1.05E-02 |
| 65 | GO:0009813: flavonoid biosynthetic process | 1.17E-02 |
| 66 | GO:0048527: lateral root development | 1.25E-02 |
| 67 | GO:0010119: regulation of stomatal movement | 1.25E-02 |
| 68 | GO:0009867: jasmonic acid mediated signaling pathway | 1.33E-02 |
| 69 | GO:0006281: DNA repair | 1.35E-02 |
| 70 | GO:0009651: response to salt stress | 1.44E-02 |
| 71 | GO:0006839: mitochondrial transport | 1.46E-02 |
| 72 | GO:0009640: photomorphogenesis | 1.59E-02 |
| 73 | GO:0009965: leaf morphogenesis | 1.73E-02 |
| 74 | GO:0031347: regulation of defense response | 1.82E-02 |
| 75 | GO:0005975: carbohydrate metabolic process | 1.85E-02 |
| 76 | GO:0009585: red, far-red light phototransduction | 1.97E-02 |
| 77 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.01E-02 |
| 78 | GO:0009620: response to fungus | 2.37E-02 |
| 79 | GO:0016569: covalent chromatin modification | 2.42E-02 |
| 80 | GO:0055114: oxidation-reduction process | 2.99E-02 |
| 81 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.85E-02 |
| 82 | GO:0009414: response to water deprivation | 4.72E-02 |
| 83 | GO:0042742: defense response to bacterium | 4.84E-02 |
| 84 | GO:0006979: response to oxidative stress | 4.87E-02 |
| 85 | GO:0009826: unidimensional cell growth | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052671: geranylgeraniol kinase activity | 0.00E+00 |
| 2 | GO:0051266: sirohydrochlorin ferrochelatase activity | 0.00E+00 |
| 3 | GO:0004746: riboflavin synthase activity | 0.00E+00 |
| 4 | GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity | 0.00E+00 |
| 5 | GO:0047504: (-)-menthol dehydrogenase activity | 0.00E+00 |
| 6 | GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity | 0.00E+00 |
| 7 | GO:0052669: CTP:2-trans,-6-trans-farnesol kinase activity | 0.00E+00 |
| 8 | GO:0016852: sirohydrochlorin cobaltochelatase activity | 0.00E+00 |
| 9 | GO:0047501: (+)-neomenthol dehydrogenase activity | 0.00E+00 |
| 10 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 11 | GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity | 0.00E+00 |
| 12 | GO:0052670: geraniol kinase activity | 0.00E+00 |
| 13 | GO:0052668: farnesol kinase activity | 0.00E+00 |
| 14 | GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity | 0.00E+00 |
| 15 | GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity | 0.00E+00 |
| 16 | GO:0004034: aldose 1-epimerase activity | 3.30E-05 |
| 17 | GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity | 7.07E-05 |
| 18 | GO:0080047: GDP-L-galactose phosphorylase activity | 7.07E-05 |
| 19 | GO:0080048: GDP-D-glucose phosphorylase activity | 7.07E-05 |
| 20 | GO:0000064: L-ornithine transmembrane transporter activity | 1.70E-04 |
| 21 | GO:0004826: phenylalanine-tRNA ligase activity | 1.70E-04 |
| 22 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 1.70E-04 |
| 23 | GO:0004848: ureidoglycolate hydrolase activity | 2.86E-04 |
| 24 | GO:0003935: GTP cyclohydrolase II activity | 2.86E-04 |
| 25 | GO:0008106: alcohol dehydrogenase (NADP+) activity | 4.15E-04 |
| 26 | GO:0035529: NADH pyrophosphatase activity | 4.15E-04 |
| 27 | GO:0016853: isomerase activity | 4.36E-04 |
| 28 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 5.53E-04 |
| 29 | GO:0016651: oxidoreductase activity, acting on NAD(P)H | 7.00E-04 |
| 30 | GO:0005496: steroid binding | 7.00E-04 |
| 31 | GO:0004356: glutamate-ammonia ligase activity | 7.00E-04 |
| 32 | GO:0016491: oxidoreductase activity | 7.61E-04 |
| 33 | GO:0015081: sodium ion transmembrane transporter activity | 8.57E-04 |
| 34 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 8.57E-04 |
| 35 | GO:0004605: phosphatidate cytidylyltransferase activity | 8.57E-04 |
| 36 | GO:0070300: phosphatidic acid binding | 1.02E-03 |
| 37 | GO:0008143: poly(A) binding | 1.19E-03 |
| 38 | GO:0008320: protein transmembrane transporter activity | 1.19E-03 |
| 39 | GO:0005085: guanyl-nucleotide exchange factor activity | 1.19E-03 |
| 40 | GO:0004427: inorganic diphosphatase activity | 1.19E-03 |
| 41 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.30E-03 |
| 42 | GO:0004185: serine-type carboxypeptidase activity | 1.47E-03 |
| 43 | GO:0015078: hydrogen ion transmembrane transporter activity | 1.56E-03 |
| 44 | GO:0015386: potassium:proton antiporter activity | 2.41E-03 |
| 45 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 2.41E-03 |
| 46 | GO:0000049: tRNA binding | 2.64E-03 |
| 47 | GO:0005315: inorganic phosphate transmembrane transporter activity | 2.88E-03 |
| 48 | GO:0004089: carbonate dehydratase activity | 2.88E-03 |
| 49 | GO:0004386: helicase activity | 3.03E-03 |
| 50 | GO:0051536: iron-sulfur cluster binding | 3.89E-03 |
| 51 | GO:0005528: FK506 binding | 3.89E-03 |
| 52 | GO:0008514: organic anion transmembrane transporter activity | 5.32E-03 |
| 53 | GO:0042802: identical protein binding | 6.05E-03 |
| 54 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 6.24E-03 |
| 55 | GO:0048038: quinone binding | 7.22E-03 |
| 56 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 7.22E-03 |
| 57 | GO:0016787: hydrolase activity | 7.30E-03 |
| 58 | GO:0015385: sodium:proton antiporter activity | 7.90E-03 |
| 59 | GO:0016168: chlorophyll binding | 9.71E-03 |
| 60 | GO:0008236: serine-type peptidase activity | 1.09E-02 |
| 61 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.33E-02 |
| 62 | GO:0043621: protein self-association | 1.68E-02 |
| 63 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.77E-02 |
| 64 | GO:0046872: metal ion binding | 1.82E-02 |
| 65 | GO:0016298: lipase activity | 2.01E-02 |
| 66 | GO:0016887: ATPase activity | 2.10E-02 |
| 67 | GO:0030246: carbohydrate binding | 3.23E-02 |
| 68 | GO:0015144: carbohydrate transmembrane transporter activity | 3.37E-02 |
| 69 | GO:0005351: sugar:proton symporter activity | 3.67E-02 |
| 70 | GO:0005525: GTP binding | 3.94E-02 |
| 71 | GO:0003723: RNA binding | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016469: proton-transporting two-sector ATPase complex | 0.00E+00 |
| 2 | GO:0045271: respiratory chain complex I | 5.22E-06 |
| 3 | GO:0005747: mitochondrial respiratory chain complex I | 1.35E-05 |
| 4 | GO:0000152: nuclear ubiquitin ligase complex | 7.07E-05 |
| 5 | GO:0031966: mitochondrial membrane | 1.64E-04 |
| 6 | GO:0042765: GPI-anchor transamidase complex | 2.86E-04 |
| 7 | GO:0009517: PSII associated light-harvesting complex II | 5.53E-04 |
| 8 | GO:0033179: proton-transporting V-type ATPase, V0 domain | 5.53E-04 |
| 9 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 5.53E-04 |
| 10 | GO:0032580: Golgi cisterna membrane | 6.02E-04 |
| 11 | GO:0005773: vacuole | 7.00E-04 |
| 12 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 7.00E-04 |
| 13 | GO:0032588: trans-Golgi network membrane | 8.57E-04 |
| 14 | GO:0009507: chloroplast | 8.91E-04 |
| 15 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 1.19E-03 |
| 16 | GO:0031969: chloroplast membrane | 1.32E-03 |
| 17 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.76E-03 |
| 18 | GO:0005763: mitochondrial small ribosomal subunit | 1.76E-03 |
| 19 | GO:0005829: cytosol | 1.77E-03 |
| 20 | GO:0016604: nuclear body | 1.97E-03 |
| 21 | GO:0016607: nuclear speck | 2.39E-03 |
| 22 | GO:0005764: lysosome | 3.12E-03 |
| 23 | GO:0005774: vacuolar membrane | 4.11E-03 |
| 24 | GO:0009523: photosystem II | 6.89E-03 |
| 25 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 8.07E-03 |
| 26 | GO:0005788: endoplasmic reticulum lumen | 9.71E-03 |
| 27 | GO:0000325: plant-type vacuole | 1.25E-02 |
| 28 | GO:0005783: endoplasmic reticulum | 1.39E-02 |
| 29 | GO:0009536: plastid | 1.41E-02 |
| 30 | GO:0010008: endosome membrane | 2.26E-02 |
| 31 | GO:0012505: endomembrane system | 2.47E-02 |
| 32 | GO:0009543: chloroplast thylakoid lumen | 2.96E-02 |
| 33 | GO:0016020: membrane | 4.17E-02 |