GO Enrichment Analysis of Co-expressed Genes with
AT4G30810
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046294: formaldehyde catabolic process | 0.00E+00 |
| 2 | GO:0036172: thiamine salvage | 0.00E+00 |
| 3 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 4 | GO:0009236: cobalamin biosynthetic process | 0.00E+00 |
| 5 | GO:0019388: galactose catabolic process | 6.85E-07 |
| 6 | GO:0009590: detection of gravity | 6.10E-06 |
| 7 | GO:0009902: chloroplast relocation | 1.15E-05 |
| 8 | GO:0009903: chloroplast avoidance movement | 4.06E-05 |
| 9 | GO:0006520: cellular amino acid metabolic process | 4.20E-05 |
| 10 | GO:0005978: glycogen biosynthetic process | 7.12E-05 |
| 11 | GO:0006526: arginine biosynthetic process | 9.00E-05 |
| 12 | GO:0046500: S-adenosylmethionine metabolic process | 1.16E-04 |
| 13 | GO:0019354: siroheme biosynthetic process | 1.16E-04 |
| 14 | GO:1902265: abscisic acid homeostasis | 1.16E-04 |
| 15 | GO:0055081: anion homeostasis | 1.16E-04 |
| 16 | GO:0048229: gametophyte development | 1.86E-04 |
| 17 | GO:0046686: response to cadmium ion | 1.96E-04 |
| 18 | GO:0006006: glucose metabolic process | 2.47E-04 |
| 19 | GO:0080183: response to photooxidative stress | 2.69E-04 |
| 20 | GO:0009257: 10-formyltetrahydrofolate biosynthetic process | 2.69E-04 |
| 21 | GO:0043100: pyrimidine nucleobase salvage | 2.69E-04 |
| 22 | GO:0010343: singlet oxygen-mediated programmed cell death | 2.69E-04 |
| 23 | GO:2000030: regulation of response to red or far red light | 2.69E-04 |
| 24 | GO:0044419: interspecies interaction between organisms | 2.69E-04 |
| 25 | GO:0007154: cell communication | 2.69E-04 |
| 26 | GO:0019441: tryptophan catabolic process to kynurenine | 2.69E-04 |
| 27 | GO:0006071: glycerol metabolic process | 3.52E-04 |
| 28 | GO:0044375: regulation of peroxisome size | 4.45E-04 |
| 29 | GO:0031022: nuclear migration along microfilament | 4.45E-04 |
| 30 | GO:0006591: ornithine metabolic process | 4.45E-04 |
| 31 | GO:0001887: selenium compound metabolic process | 4.45E-04 |
| 32 | GO:1901562: response to paraquat | 4.45E-04 |
| 33 | GO:0071492: cellular response to UV-A | 4.45E-04 |
| 34 | GO:0006624: vacuolar protein processing | 6.38E-04 |
| 35 | GO:0009399: nitrogen fixation | 6.38E-04 |
| 36 | GO:0009113: purine nucleobase biosynthetic process | 6.38E-04 |
| 37 | GO:0005975: carbohydrate metabolic process | 8.03E-04 |
| 38 | GO:0034613: cellular protein localization | 8.47E-04 |
| 39 | GO:0006542: glutamine biosynthetic process | 8.47E-04 |
| 40 | GO:0071486: cellular response to high light intensity | 8.47E-04 |
| 41 | GO:0009765: photosynthesis, light harvesting | 8.47E-04 |
| 42 | GO:0006221: pyrimidine nucleotide biosynthetic process | 8.47E-04 |
| 43 | GO:0071585: detoxification of cadmium ion | 8.47E-04 |
| 44 | GO:0044205: 'de novo' UMP biosynthetic process | 8.47E-04 |
| 45 | GO:0019252: starch biosynthetic process | 8.79E-04 |
| 46 | GO:0009058: biosynthetic process | 9.61E-04 |
| 47 | GO:0009229: thiamine diphosphate biosynthetic process | 1.07E-03 |
| 48 | GO:0016120: carotene biosynthetic process | 1.07E-03 |
| 49 | GO:0000304: response to singlet oxygen | 1.07E-03 |
| 50 | GO:0009904: chloroplast accumulation movement | 1.07E-03 |
| 51 | GO:0010236: plastoquinone biosynthetic process | 1.07E-03 |
| 52 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.31E-03 |
| 53 | GO:0070814: hydrogen sulfide biosynthetic process | 1.31E-03 |
| 54 | GO:0009228: thiamine biosynthetic process | 1.31E-03 |
| 55 | GO:0006796: phosphate-containing compound metabolic process | 1.31E-03 |
| 56 | GO:0009117: nucleotide metabolic process | 1.31E-03 |
| 57 | GO:0010019: chloroplast-nucleus signaling pathway | 1.56E-03 |
| 58 | GO:0034389: lipid particle organization | 1.56E-03 |
| 59 | GO:0017148: negative regulation of translation | 1.56E-03 |
| 60 | GO:0009396: folic acid-containing compound biosynthetic process | 1.84E-03 |
| 61 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.84E-03 |
| 62 | GO:0055114: oxidation-reduction process | 2.05E-03 |
| 63 | GO:0009231: riboflavin biosynthetic process | 2.13E-03 |
| 64 | GO:0016559: peroxisome fission | 2.13E-03 |
| 65 | GO:0008610: lipid biosynthetic process | 2.13E-03 |
| 66 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.13E-03 |
| 67 | GO:0030091: protein repair | 2.13E-03 |
| 68 | GO:0009637: response to blue light | 2.18E-03 |
| 69 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 2.43E-03 |
| 70 | GO:0022900: electron transport chain | 2.43E-03 |
| 71 | GO:0015996: chlorophyll catabolic process | 2.43E-03 |
| 72 | GO:0015780: nucleotide-sugar transport | 2.74E-03 |
| 73 | GO:0019432: triglyceride biosynthetic process | 2.74E-03 |
| 74 | GO:0035999: tetrahydrofolate interconversion | 3.07E-03 |
| 75 | GO:0009098: leucine biosynthetic process | 3.07E-03 |
| 76 | GO:0006508: proteolysis | 3.22E-03 |
| 77 | GO:0043069: negative regulation of programmed cell death | 3.41E-03 |
| 78 | GO:0045036: protein targeting to chloroplast | 3.41E-03 |
| 79 | GO:0009970: cellular response to sulfate starvation | 3.41E-03 |
| 80 | GO:0000103: sulfate assimilation | 3.41E-03 |
| 81 | GO:0072593: reactive oxygen species metabolic process | 3.76E-03 |
| 82 | GO:0043085: positive regulation of catalytic activity | 3.76E-03 |
| 83 | GO:0006879: cellular iron ion homeostasis | 3.76E-03 |
| 84 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.76E-03 |
| 85 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.89E-03 |
| 86 | GO:0002213: defense response to insect | 4.13E-03 |
| 87 | GO:0050826: response to freezing | 4.50E-03 |
| 88 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.50E-03 |
| 89 | GO:0030048: actin filament-based movement | 4.50E-03 |
| 90 | GO:0006108: malate metabolic process | 4.50E-03 |
| 91 | GO:0070588: calcium ion transmembrane transport | 5.29E-03 |
| 92 | GO:0007031: peroxisome organization | 5.29E-03 |
| 93 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.70E-03 |
| 94 | GO:0051017: actin filament bundle assembly | 6.12E-03 |
| 95 | GO:0042742: defense response to bacterium | 6.32E-03 |
| 96 | GO:0008299: isoprenoid biosynthetic process | 6.56E-03 |
| 97 | GO:0009695: jasmonic acid biosynthetic process | 6.56E-03 |
| 98 | GO:0019915: lipid storage | 7.00E-03 |
| 99 | GO:0016226: iron-sulfur cluster assembly | 7.46E-03 |
| 100 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 7.46E-03 |
| 101 | GO:0006012: galactose metabolic process | 7.92E-03 |
| 102 | GO:0009693: ethylene biosynthetic process | 7.92E-03 |
| 103 | GO:0016117: carotenoid biosynthetic process | 8.88E-03 |
| 104 | GO:0042391: regulation of membrane potential | 9.38E-03 |
| 105 | GO:0080022: primary root development | 9.38E-03 |
| 106 | GO:0009409: response to cold | 1.00E-02 |
| 107 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.15E-02 |
| 108 | GO:0019761: glucosinolate biosynthetic process | 1.20E-02 |
| 109 | GO:1901657: glycosyl compound metabolic process | 1.26E-02 |
| 110 | GO:0006464: cellular protein modification process | 1.31E-02 |
| 111 | GO:0051607: defense response to virus | 1.43E-02 |
| 112 | GO:0006970: response to osmotic stress | 1.54E-02 |
| 113 | GO:0010029: regulation of seed germination | 1.55E-02 |
| 114 | GO:0042128: nitrate assimilation | 1.61E-02 |
| 115 | GO:0006974: cellular response to DNA damage stimulus | 1.61E-02 |
| 116 | GO:0015995: chlorophyll biosynthetic process | 1.67E-02 |
| 117 | GO:0010411: xyloglucan metabolic process | 1.67E-02 |
| 118 | GO:0080167: response to karrikin | 1.78E-02 |
| 119 | GO:0009813: flavonoid biosynthetic process | 1.86E-02 |
| 120 | GO:0010043: response to zinc ion | 1.99E-02 |
| 121 | GO:0007568: aging | 1.99E-02 |
| 122 | GO:0045454: cell redox homeostasis | 2.13E-02 |
| 123 | GO:0006099: tricarboxylic acid cycle | 2.19E-02 |
| 124 | GO:0006631: fatty acid metabolic process | 2.40E-02 |
| 125 | GO:0009926: auxin polar transport | 2.54E-02 |
| 126 | GO:0009408: response to heat | 2.62E-02 |
| 127 | GO:0008643: carbohydrate transport | 2.69E-02 |
| 128 | GO:0006952: defense response | 2.93E-02 |
| 129 | GO:0009620: response to fungus | 3.79E-02 |
| 130 | GO:0009651: response to salt stress | 3.85E-02 |
| 131 | GO:0009624: response to nematode | 4.04E-02 |
| 132 | GO:0051726: regulation of cell cycle | 4.21E-02 |
| 133 | GO:0009611: response to wounding | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047501: (+)-neomenthol dehydrogenase activity | 0.00E+00 |
| 2 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 3 | GO:0004768: stearoyl-CoA 9-desaturase activity | 0.00E+00 |
| 4 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 5 | GO:0004585: ornithine carbamoyltransferase activity | 0.00E+00 |
| 6 | GO:0050486: intramolecular transferase activity, transferring hydroxy groups | 0.00E+00 |
| 7 | GO:0015205: nucleobase transmembrane transporter activity | 0.00E+00 |
| 8 | GO:0051266: sirohydrochlorin ferrochelatase activity | 0.00E+00 |
| 9 | GO:0004151: dihydroorotase activity | 0.00E+00 |
| 10 | GO:0047504: (-)-menthol dehydrogenase activity | 0.00E+00 |
| 11 | GO:0003992: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity | 0.00E+00 |
| 12 | GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity | 0.00E+00 |
| 13 | GO:0018738: S-formylglutathione hydrolase activity | 0.00E+00 |
| 14 | GO:0030732: methionine S-methyltransferase activity | 0.00E+00 |
| 15 | GO:0016852: sirohydrochlorin cobaltochelatase activity | 0.00E+00 |
| 16 | GO:0004614: phosphoglucomutase activity | 6.85E-07 |
| 17 | GO:0008106: alcohol dehydrogenase (NADP+) activity | 6.10E-06 |
| 18 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 2.87E-05 |
| 19 | GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity | 1.16E-04 |
| 20 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 1.16E-04 |
| 21 | GO:0046480: galactolipid galactosyltransferase activity | 1.16E-04 |
| 22 | GO:0046906: tetrapyrrole binding | 1.16E-04 |
| 23 | GO:0080079: cellobiose glucosidase activity | 1.16E-04 |
| 24 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 1.16E-04 |
| 25 | GO:0010313: phytochrome binding | 1.16E-04 |
| 26 | GO:0016783: sulfurtransferase activity | 1.16E-04 |
| 27 | GO:0030170: pyridoxal phosphate binding | 1.21E-04 |
| 28 | GO:0046872: metal ion binding | 2.37E-04 |
| 29 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.69E-04 |
| 30 | GO:0043425: bHLH transcription factor binding | 2.69E-04 |
| 31 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 2.69E-04 |
| 32 | GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity | 2.69E-04 |
| 33 | GO:0050347: trans-octaprenyltranstransferase activity | 2.69E-04 |
| 34 | GO:0004477: methenyltetrahydrofolate cyclohydrolase activity | 2.69E-04 |
| 35 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 2.69E-04 |
| 36 | GO:0004046: aminoacylase activity | 2.69E-04 |
| 37 | GO:0016743: carboxyl- or carbamoyltransferase activity | 2.69E-04 |
| 38 | GO:0004061: arylformamidase activity | 2.69E-04 |
| 39 | GO:0004329: formate-tetrahydrofolate ligase activity | 2.69E-04 |
| 40 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.29E-04 |
| 41 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 4.45E-04 |
| 42 | GO:0004848: ureidoglycolate hydrolase activity | 4.45E-04 |
| 43 | GO:0004557: alpha-galactosidase activity | 4.45E-04 |
| 44 | GO:0003861: 3-isopropylmalate dehydratase activity | 4.45E-04 |
| 45 | GO:0003935: GTP cyclohydrolase II activity | 4.45E-04 |
| 46 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 4.45E-04 |
| 47 | GO:0016491: oxidoreductase activity | 6.05E-04 |
| 48 | GO:0048027: mRNA 5'-UTR binding | 6.38E-04 |
| 49 | GO:0035529: NADH pyrophosphatase activity | 6.38E-04 |
| 50 | GO:0004792: thiosulfate sulfurtransferase activity | 6.38E-04 |
| 51 | GO:0004356: glutamate-ammonia ligase activity | 1.07E-03 |
| 52 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 1.07E-03 |
| 53 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.31E-03 |
| 54 | GO:0030060: L-malate dehydrogenase activity | 1.56E-03 |
| 55 | GO:0005261: cation channel activity | 1.56E-03 |
| 56 | GO:0004144: diacylglycerol O-acyltransferase activity | 1.56E-03 |
| 57 | GO:0008236: serine-type peptidase activity | 1.64E-03 |
| 58 | GO:0042802: identical protein binding | 1.81E-03 |
| 59 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 1.84E-03 |
| 60 | GO:0004427: inorganic diphosphatase activity | 1.84E-03 |
| 61 | GO:0019899: enzyme binding | 1.84E-03 |
| 62 | GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity | 2.13E-03 |
| 63 | GO:0004034: aldose 1-epimerase activity | 2.13E-03 |
| 64 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.18E-03 |
| 65 | GO:0000287: magnesium ion binding | 2.27E-03 |
| 66 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.48E-03 |
| 67 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 2.74E-03 |
| 68 | GO:0004185: serine-type carboxypeptidase activity | 2.80E-03 |
| 69 | GO:0005507: copper ion binding | 3.71E-03 |
| 70 | GO:0008378: galactosyltransferase activity | 4.13E-03 |
| 71 | GO:0031072: heat shock protein binding | 4.50E-03 |
| 72 | GO:0005388: calcium-transporting ATPase activity | 4.50E-03 |
| 73 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.50E-03 |
| 74 | GO:0004175: endopeptidase activity | 4.89E-03 |
| 75 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.89E-03 |
| 76 | GO:0030552: cAMP binding | 5.29E-03 |
| 77 | GO:0030553: cGMP binding | 5.29E-03 |
| 78 | GO:0009055: electron carrier activity | 5.46E-03 |
| 79 | GO:0015035: protein disulfide oxidoreductase activity | 5.49E-03 |
| 80 | GO:0051536: iron-sulfur cluster binding | 6.12E-03 |
| 81 | GO:0005216: ion channel activity | 6.56E-03 |
| 82 | GO:0004176: ATP-dependent peptidase activity | 7.00E-03 |
| 83 | GO:0005249: voltage-gated potassium channel activity | 9.38E-03 |
| 84 | GO:0030551: cyclic nucleotide binding | 9.38E-03 |
| 85 | GO:0016853: isomerase activity | 1.04E-02 |
| 86 | GO:0048038: quinone binding | 1.15E-02 |
| 87 | GO:0004197: cysteine-type endopeptidase activity | 1.20E-02 |
| 88 | GO:0004518: nuclease activity | 1.20E-02 |
| 89 | GO:0008483: transaminase activity | 1.37E-02 |
| 90 | GO:0008237: metallopeptidase activity | 1.37E-02 |
| 91 | GO:0016413: O-acetyltransferase activity | 1.43E-02 |
| 92 | GO:0016597: amino acid binding | 1.43E-02 |
| 93 | GO:0016788: hydrolase activity, acting on ester bonds | 1.46E-02 |
| 94 | GO:0016168: chlorophyll binding | 1.55E-02 |
| 95 | GO:0008375: acetylglucosaminyltransferase activity | 1.61E-02 |
| 96 | GO:0030247: polysaccharide binding | 1.67E-02 |
| 97 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.73E-02 |
| 98 | GO:0004222: metalloendopeptidase activity | 1.92E-02 |
| 99 | GO:0052689: carboxylic ester hydrolase activity | 1.96E-02 |
| 100 | GO:0008422: beta-glucosidase activity | 2.26E-02 |
| 101 | GO:0016298: lipase activity | 3.22E-02 |
| 102 | GO:0008234: cysteine-type peptidase activity | 3.38E-02 |
| 103 | GO:0022857: transmembrane transporter activity | 3.87E-02 |
| 104 | GO:0051082: unfolded protein binding | 4.04E-02 |
| 105 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.04E-13 |
| 2 | GO:0009570: chloroplast stroma | 6.17E-06 |
| 3 | GO:0010319: stromule | 8.60E-05 |
| 4 | GO:0009536: plastid | 1.06E-04 |
| 5 | GO:0005773: vacuole | 2.93E-04 |
| 6 | GO:0005829: cytosol | 6.19E-04 |
| 7 | GO:0000323: lytic vacuole | 6.38E-04 |
| 8 | GO:0009526: plastid envelope | 8.47E-04 |
| 9 | GO:0031359: integral component of chloroplast outer membrane | 1.84E-03 |
| 10 | GO:0009501: amyloplast | 2.13E-03 |
| 11 | GO:0005779: integral component of peroxisomal membrane | 2.43E-03 |
| 12 | GO:0005811: lipid particle | 2.43E-03 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.74E-03 |
| 14 | GO:0031969: chloroplast membrane | 3.05E-03 |
| 15 | GO:0005884: actin filament | 3.76E-03 |
| 16 | GO:0005774: vacuolar membrane | 4.07E-03 |
| 17 | GO:0048046: apoplast | 4.48E-03 |
| 18 | GO:0005764: lysosome | 4.89E-03 |
| 19 | GO:0009535: chloroplast thylakoid membrane | 6.19E-03 |
| 20 | GO:0010287: plastoglobule | 6.32E-03 |
| 21 | GO:0042651: thylakoid membrane | 6.56E-03 |
| 22 | GO:0005623: cell | 6.85E-03 |
| 23 | GO:0009941: chloroplast envelope | 7.40E-03 |
| 24 | GO:0005759: mitochondrial matrix | 8.39E-03 |
| 25 | GO:0009523: photosystem II | 1.09E-02 |
| 26 | GO:0005778: peroxisomal membrane | 1.37E-02 |
| 27 | GO:0005783: endoplasmic reticulum | 1.59E-02 |
| 28 | GO:0009707: chloroplast outer membrane | 1.80E-02 |
| 29 | GO:0000325: plant-type vacuole | 1.99E-02 |
| 30 | GO:0009505: plant-type cell wall | 3.34E-02 |
| 31 | GO:0005887: integral component of plasma membrane | 3.56E-02 |
| 32 | GO:0005747: mitochondrial respiratory chain complex I | 3.63E-02 |
| 33 | GO:0009706: chloroplast inner membrane | 4.04E-02 |
| 34 | GO:0005618: cell wall | 4.88E-02 |