co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G30240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045595: regulation of cell differentiation	0.00E+00
2	GO:0046967: cytosol to ER transport	0.00E+00
3	GO:0009611: response to wounding	5.70E-06
4	GO:0006470: protein dephosphorylation	6.28E-06
5	GO:0010200: response to chitin	2.92E-05
6	GO:0009695: jasmonic acid biosynthetic process	4.11E-05
7	GO:0051180: vitamin transport	1.77E-04
8	GO:0007229: integrin-mediated signaling pathway	1.77E-04
9	GO:0030974: thiamine pyrophosphate transport	1.77E-04
10	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	1.77E-04
11	GO:0050691: regulation of defense response to virus by host	1.77E-04
12	GO:0006680: glucosylceramide catabolic process	1.77E-04
13	GO:1902039: negative regulation of seed dormancy process	1.77E-04
14	GO:0030148: sphingolipid biosynthetic process	3.42E-04
15	GO:0009790: embryo development	3.57E-04
16	GO:0044419: interspecies interaction between organisms	4.01E-04
17	GO:0015893: drug transport	4.01E-04
18	GO:0048838: release of seed from dormancy	4.01E-04
19	GO:0006741: NADP biosynthetic process	4.01E-04
20	GO:0009737: response to abscisic acid	4.66E-04
21	GO:0019674: NAD metabolic process	6.55E-04
22	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	6.55E-04
23	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	6.55E-04
24	GO:0080168: abscisic acid transport	6.55E-04
25	GO:0031408: oxylipin biosynthetic process	8.37E-04
26	GO:0019363: pyridine nucleotide biosynthetic process	9.34E-04
27	GO:0010371: regulation of gibberellin biosynthetic process	9.34E-04
28	GO:0009399: nitrogen fixation	9.34E-04
29	GO:0033014: tetrapyrrole biosynthetic process	9.34E-04
30	GO:0006970: response to osmotic stress	1.01E-03
31	GO:0009414: response to water deprivation	1.10E-03
32	GO:0009738: abscisic acid-activated signaling pathway	1.18E-03
33	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.24E-03
34	GO:0045727: positive regulation of translation	1.24E-03
35	GO:0034440: lipid oxidation	1.24E-03
36	GO:0010107: potassium ion import	1.24E-03
37	GO:1902347: response to strigolactone	1.24E-03
38	GO:0048653: anther development	1.25E-03
39	GO:0009620: response to fungus	1.27E-03
40	GO:0071472: cellular response to salt stress	1.35E-03
41	GO:0009247: glycolipid biosynthetic process	1.57E-03
42	GO:0045487: gibberellin catabolic process	1.57E-03
43	GO:0030041: actin filament polymerization	1.57E-03
44	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.65E-03
45	GO:0010193: response to ozone	1.65E-03
46	GO:0071281: cellular response to iron ion	1.88E-03
47	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	1.94E-03
48	GO:0048317: seed morphogenesis	1.94E-03
49	GO:0047484: regulation of response to osmotic stress	1.94E-03
50	GO:1900425: negative regulation of defense response to bacterium	1.94E-03
51	GO:0010286: heat acclimation	2.12E-03
52	GO:0080086: stamen filament development	2.32E-03
53	GO:1901001: negative regulation of response to salt stress	2.32E-03
54	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.51E-03
55	GO:0006401: RNA catabolic process	2.74E-03
56	GO:0006955: immune response	2.74E-03
57	GO:1900057: positive regulation of leaf senescence	2.74E-03
58	GO:1900150: regulation of defense response to fungus	3.17E-03
59	GO:0019375: galactolipid biosynthetic process	3.17E-03
60	GO:2000070: regulation of response to water deprivation	3.17E-03
61	GO:0045010: actin nucleation	3.17E-03
62	GO:0006811: ion transport	3.41E-03
63	GO:0009835: fruit ripening	4.10E-03
64	GO:0051865: protein autoubiquitination	4.10E-03
65	GO:0006783: heme biosynthetic process	4.10E-03
66	GO:0009651: response to salt stress	4.23E-03
67	GO:0006779: porphyrin-containing compound biosynthetic process	4.60E-03
68	GO:2000280: regulation of root development	4.60E-03
69	GO:0008202: steroid metabolic process	4.60E-03
70	GO:0051707: response to other organism	5.03E-03
71	GO:0006782: protoporphyrinogen IX biosynthetic process	5.11E-03
72	GO:0019538: protein metabolic process	5.11E-03
73	GO:0055062: phosphate ion homeostasis	5.11E-03
74	GO:0048829: root cap development	5.11E-03
75	GO:0010015: root morphogenesis	5.65E-03
76	GO:0072593: reactive oxygen species metabolic process	5.65E-03
77	GO:0006820: anion transport	6.20E-03
78	GO:0045893: positive regulation of transcription, DNA-templated	6.62E-03
79	GO:0055046: microgametogenesis	6.78E-03
80	GO:0050826: response to freezing	6.78E-03
81	GO:0010224: response to UV-B	7.02E-03
82	GO:0048467: gynoecium development	7.37E-03
83	GO:0002237: response to molecule of bacterial origin	7.37E-03
84	GO:0009901: anther dehiscence	7.98E-03
85	GO:0071732: cellular response to nitric oxide	7.98E-03
86	GO:0010030: positive regulation of seed germination	7.98E-03
87	GO:0070588: calcium ion transmembrane transport	7.98E-03
88	GO:0006468: protein phosphorylation	9.98E-03
89	GO:0009408: response to heat	1.06E-02
90	GO:0000398: mRNA splicing, via spliceosome	1.12E-02
91	GO:0030245: cellulose catabolic process	1.13E-02
92	GO:0010017: red or far-red light signaling pathway	1.13E-02
93	GO:0009693: ethylene biosynthetic process	1.20E-02
94	GO:0009686: gibberellin biosynthetic process	1.20E-02
95	GO:0071369: cellular response to ethylene stimulus	1.20E-02
96	GO:0040007: growth	1.20E-02
97	GO:0048443: stamen development	1.27E-02
98	GO:0019722: calcium-mediated signaling	1.27E-02
99	GO:0010118: stomatal movement	1.43E-02
100	GO:0042631: cellular response to water deprivation	1.43E-02
101	GO:0000271: polysaccharide biosynthetic process	1.43E-02
102	GO:0009960: endosperm development	1.50E-02
103	GO:0045489: pectin biosynthetic process	1.50E-02
104	GO:0048544: recognition of pollen	1.58E-02
105	GO:0006814: sodium ion transport	1.58E-02
106	GO:0009749: response to glucose	1.66E-02
107	GO:0007623: circadian rhythm	1.68E-02
108	GO:1901657: glycosyl compound metabolic process	1.91E-02
109	GO:0019760: glucosinolate metabolic process	2.00E-02
110	GO:0009639: response to red or far red light	2.00E-02
111	GO:0009617: response to bacterium	2.00E-02
112	GO:0071805: potassium ion transmembrane transport	2.09E-02
113	GO:0051607: defense response to virus	2.18E-02
114	GO:0009555: pollen development	2.20E-02
115	GO:0010027: thylakoid membrane organization	2.27E-02
116	GO:0010029: regulation of seed germination	2.36E-02
117	GO:0035556: intracellular signal transduction	2.36E-02
118	GO:0015995: chlorophyll biosynthetic process	2.55E-02
119	GO:0006950: response to stress	2.55E-02
120	GO:0016049: cell growth	2.64E-02
121	GO:0048481: plant ovule development	2.74E-02
122	GO:0010311: lateral root formation	2.84E-02
123	GO:0045087: innate immune response	3.24E-02
124	GO:0016051: carbohydrate biosynthetic process	3.24E-02
125	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.33E-02
126	GO:0006839: mitochondrial transport	3.56E-02
127	GO:0042542: response to hydrogen peroxide	3.78E-02
128	GO:0006351: transcription, DNA-templated	3.84E-02
129	GO:0009640: photomorphogenesis	3.88E-02
130	GO:0010114: response to red light	3.88E-02
131	GO:0000209: protein polyubiquitination	4.00E-02
132	GO:0006855: drug transmembrane transport	4.33E-02
133	GO:0031347: regulation of defense response	4.45E-02
134	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.45E-02
135	GO:0000165: MAPK cascade	4.45E-02
136	GO:0006812: cation transport	4.56E-02
137	GO:0009751: response to salicylic acid	4.66E-02
138	GO:0006629: lipid metabolic process	4.73E-02
139	GO:0009809: lignin biosynthetic process	4.80E-02
140	GO:0006364: rRNA processing	4.80E-02
141	GO:0006813: potassium ion transport	4.80E-02
142	GO:0009736: cytokinin-activated signaling pathway	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
2	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
3	GO:0004722: protein serine/threonine phosphatase activity	5.37E-06
4	GO:0090422: thiamine pyrophosphate transporter activity	1.77E-04
5	GO:0090440: abscisic acid transporter activity	1.77E-04
6	GO:0004348: glucosylceramidase activity	1.77E-04
7	GO:0042736: NADH kinase activity	1.77E-04
8	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.01E-04
9	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	4.01E-04
10	GO:0045140: inositol phosphoceramide synthase activity	4.01E-04
11	GO:0016629: 12-oxophytodienoate reductase activity	4.01E-04
12	GO:0004103: choline kinase activity	4.01E-04
13	GO:0008883: glutamyl-tRNA reductase activity	4.01E-04
14	GO:0001047: core promoter binding	4.01E-04
15	GO:0004758: serine C-palmitoyltransferase activity	6.55E-04
16	GO:0046423: allene-oxide cyclase activity	6.55E-04
17	GO:0004383: guanylate cyclase activity	6.55E-04
18	GO:0016165: linoleate 13S-lipoxygenase activity	6.55E-04
19	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	9.34E-04
20	GO:0001653: peptide receptor activity	9.34E-04
21	GO:0005432: calcium:sodium antiporter activity	9.34E-04
22	GO:0004715: non-membrane spanning protein tyrosine kinase activity	9.34E-04
23	GO:0035250: UDP-galactosyltransferase activity	9.34E-04
24	GO:0044212: transcription regulatory region DNA binding	1.15E-03
25	GO:0043015: gamma-tubulin binding	1.24E-03
26	GO:0004659: prenyltransferase activity	1.24E-03
27	GO:0008381: mechanically-gated ion channel activity	1.57E-03
28	GO:0004356: glutamate-ammonia ligase activity	1.57E-03
29	GO:0016301: kinase activity	2.16E-03
30	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.32E-03
31	GO:0019900: kinase binding	2.32E-03
32	GO:0015297: antiporter activity	2.67E-03
33	GO:0016621: cinnamoyl-CoA reductase activity	2.74E-03
34	GO:0004806: triglyceride lipase activity	2.80E-03
35	GO:0004564: beta-fructofuranosidase activity	3.17E-03
36	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	3.17E-03
37	GO:0015491: cation:cation antiporter activity	3.17E-03
38	GO:0008142: oxysterol binding	3.63E-03
39	GO:0005267: potassium channel activity	3.63E-03
40	GO:0003951: NAD+ kinase activity	3.63E-03
41	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.27E-03
42	GO:0004575: sucrose alpha-glucosidase activity	4.60E-03
43	GO:0047617: acyl-CoA hydrolase activity	4.60E-03
44	GO:0004713: protein tyrosine kinase activity	5.11E-03
45	GO:0005262: calcium channel activity	6.78E-03
46	GO:0019888: protein phosphatase regulator activity	6.78E-03
47	GO:0000175: 3'-5'-exoribonuclease activity	6.78E-03
48	GO:0004672: protein kinase activity	8.45E-03
49	GO:0043565: sequence-specific DNA binding	1.04E-02
50	GO:0004540: ribonuclease activity	1.06E-02
51	GO:0004707: MAP kinase activity	1.06E-02
52	GO:0046872: metal ion binding	1.08E-02
53	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.13E-02
54	GO:0005524: ATP binding	1.16E-02
55	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.24E-02
56	GO:0008514: organic anion transmembrane transporter activity	1.27E-02
57	GO:0030170: pyridoxal phosphate binding	1.35E-02
58	GO:0015144: carbohydrate transmembrane transporter activity	1.45E-02
59	GO:0016853: isomerase activity	1.58E-02
60	GO:0010181: FMN binding	1.58E-02
61	GO:0005351: sugar:proton symporter activity	1.64E-02
62	GO:0019901: protein kinase binding	1.66E-02
63	GO:0004842: ubiquitin-protein transferase activity	2.53E-02
64	GO:0102483: scopolin beta-glucosidase activity	2.55E-02
65	GO:0004721: phosphoprotein phosphatase activity	2.55E-02
66	GO:0004004: ATP-dependent RNA helicase activity	2.55E-02
67	GO:0004674: protein serine/threonine kinase activity	2.56E-02
68	GO:0015238: drug transmembrane transporter activity	2.84E-02
69	GO:0005096: GTPase activator activity	2.84E-02
70	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.04E-02
71	GO:0008422: beta-glucosidase activity	3.45E-02
72	GO:0050661: NADP binding	3.56E-02
73	GO:0051539: 4 iron, 4 sulfur cluster binding	3.56E-02
74	GO:0005516: calmodulin binding	3.66E-02
75	GO:0043621: protein self-association	4.11E-02
76	GO:0035091: phosphatidylinositol binding	4.11E-02
77	GO:0016298: lipase activity	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0019008: molybdopterin synthase complex	1.77E-04
2	GO:0000178: exosome (RNase complex)	1.57E-03
3	GO:0031463: Cul3-RING ubiquitin ligase complex	1.94E-03
4	GO:0016363: nuclear matrix	2.32E-03
5	GO:0000159: protein phosphatase type 2A complex	5.65E-03
6	GO:0071013: catalytic step 2 spliceosome	5.65E-03
7	GO:0005737: cytoplasm	7.20E-03
8	GO:0030136: clathrin-coated vesicle	1.35E-02
9	GO:0005770: late endosome	1.50E-02
10	GO:0005778: peroxisomal membrane	2.09E-02
11	GO:0000932: P-body	2.27E-02
12	GO:0005886: plasma membrane	2.72E-02
13	GO:0009707: chloroplast outer membrane	2.74E-02
14	GO:0031902: late endosome membrane	3.67E-02
15	GO:0031225: anchored component of membrane	3.83E-02
16	GO:0090406: pollen tube	3.88E-02
17	GO:0005743: mitochondrial inner membrane	4.40E-02